This document contains information about bacterial strains from the genus Xylella fastidiosa isolated from different plant species and locations. It includes the strain code, subspecies, host plant, country and location of isolation, year of isolation, and reference codes from other collections for each strain. The strains were isolated from plants such as almond, grape, oleander, and Prunus species in locations including California, Georgia, and North Carolina in the United States as well as Belgium and the Netherlands.
Deep Sequencing Identifies Novel Circulating and Hepatic ncRNA Profiles in NA...James Nelson
Next-generation RNA sequencing has expedited the identification of new non-coding RNA species (ncRNAs), thus ushering in the emerging field of ncRNA biology. The goals of this study were to catalogue the spectrum of different ncRNAs in serum and liver of patients with NAFLD and to compare expression of serum exRNAs between NAFLD patients and healthy control subjects.
Deep Sequencing Identifies Novel Circulating and Hepatic ncRNA Profiles in NA...James Nelson
Next-generation RNA sequencing has expedited the identification of new non-coding RNA species (ncRNAs), thus ushering in the emerging field of ncRNA biology. The goals of this study were to catalogue the spectrum of different ncRNAs in serum and liver of patients with NAFLD and to compare expression of serum exRNAs between NAFLD patients and healthy control subjects.
Variation in the virulence of Magnaporthe grisea isolates adapted to finger m...ICRISAT
Finger millet is the fourth most important millet covering 10 % of the global millet area in over 25 countries in Asia and Africa. Though India is the leading producer of the crop with an area of 1.4 million ha and 2.0 million tons grain production. Its production is severely hampered by blast fungus Magnaporthe grisea which affects leaves, fingers, neck and discolors the seed; thus, significantly reducing the grain yield and quality. The average loss due to blast has been reported to be around 20-30% and could be as high as 80-90% in endemic areas. Recognizing the importance of finger millet and constraints posed by blast disease, present study was planned to characterize populations of M. grisea adapted to finger millet from diverse geographical locations with reference to pathogenicity of the isolates.
SNP discovery in African taurine and Zebu cattle by whole genome sequencing o...ILRI
Poster by Noyes HA, Agaba M, Anderson SI, Archibald AL, Ashelford K, Bradley D, Brass A, Finalyson HA, Hanotte O, Kay S, Kemp SJ, Khodadadi M, Law AS, Lu Z, Smith S, Talbot R, and Hall N. For the BecA Opening, Nairobi, 5 November 2010
Homo sapiens (human pepsin) NCBI GENBANKShreyaBhatt23
GenBank format and FASTA format as homo sapiens pepsin as an example bioinformatics practical 1st experiment ; sequence retrival from nucleotide sequence from NCBI
Dr. Paulo Arruda - Continuing Diagnostic Investigation–Novel SapelovirusJohn Blue
Continuing Diagnostic Investigation–Novel Sapelovirus - Dr. Paulo Arruda, from the 2016 Allen D. Leman Swine Conference, September 17-20, 2016, St. Paul, Minnesota, USA.
More presentations at http://www.swinecast.com/2016-leman-swine-conference-material
Variation in the virulence of Magnaporthe grisea isolates adapted to finger m...ICRISAT
Finger millet is the fourth most important millet covering 10 % of the global millet area in over 25 countries in Asia and Africa. Though India is the leading producer of the crop with an area of 1.4 million ha and 2.0 million tons grain production. Its production is severely hampered by blast fungus Magnaporthe grisea which affects leaves, fingers, neck and discolors the seed; thus, significantly reducing the grain yield and quality. The average loss due to blast has been reported to be around 20-30% and could be as high as 80-90% in endemic areas. Recognizing the importance of finger millet and constraints posed by blast disease, present study was planned to characterize populations of M. grisea adapted to finger millet from diverse geographical locations with reference to pathogenicity of the isolates.
SNP discovery in African taurine and Zebu cattle by whole genome sequencing o...ILRI
Poster by Noyes HA, Agaba M, Anderson SI, Archibald AL, Ashelford K, Bradley D, Brass A, Finalyson HA, Hanotte O, Kay S, Kemp SJ, Khodadadi M, Law AS, Lu Z, Smith S, Talbot R, and Hall N. For the BecA Opening, Nairobi, 5 November 2010
Homo sapiens (human pepsin) NCBI GENBANKShreyaBhatt23
GenBank format and FASTA format as homo sapiens pepsin as an example bioinformatics practical 1st experiment ; sequence retrival from nucleotide sequence from NCBI
Dr. Paulo Arruda - Continuing Diagnostic Investigation–Novel SapelovirusJohn Blue
Continuing Diagnostic Investigation–Novel Sapelovirus - Dr. Paulo Arruda, from the 2016 Allen D. Leman Swine Conference, September 17-20, 2016, St. Paul, Minnesota, USA.
More presentations at http://www.swinecast.com/2016-leman-swine-conference-material
Dr. Paulo Arruda - Continuing Diagnostic Investigation–Novel Sapelovirus
Documento 2
1. codice nome della specie pianta da cui è
stato isolato
paese di
origine
anno di
isolamento
codice in
altre
collezioni
riferimenti
LMG 9063
Xylella fastidiosa subsp.
multiplex
Schaad, Postnikova, Lacy,
Fatmi and Chang 2009 VL
Prunus salicina
Georgia
(United States)
ATCC
35871;ICMP
15199;ICMP
8735;Wells
PLM-G83
Mehta A, Rosato YB, Phylogenetic relationships
of Xylella fastidiosa strains from different hosts,
based on 16S rDNA and 16S-23S intergenic
spacer sequences, Int J Syst Evol Microbiol, 51,
311-318, 2001 Mar [PMID: 11321075] .
BELGIO
LMG 15099
Xylella fastidiosa Wells,
Raju, Hung, Weisburg,
Mandelco-Paul, Brenner
1987 VP
almond
California
( United States)
ATCC
35870;Raju
ALS-BC;Wells
2685 ALS-BC
Xylella fastidiosa subsp. fastidiosa Wells et al.
(ATCC® 35870™)
https://www.lgcstandards-
atcc.org/Products/All/35870.aspx
BELGIO
LMG 15553
Xylella fastidiosa Wells,
Raju, Hung, Weisburg,
Mandelco-Paul, Brenner
1987 VP
Vitis rotundifolia cv.
Carlos
North Carolina
(United States)
1985 Williamson C-
P15
http://www.q-
bank.eu/Bacteria/BioloMICS.aspx?Link=T&Tab
leKey=14948773000000043&Rec=145&Fields=
All
BELGIO
LMG 9061
Xylella fastidiosa Wells,
Raju, Hung, Weisburg,
Mandelco-Paul, Brenner
1987 VP
Prunus dulcis (Mill.)
D.A. Webb)
California
(United States)
ATCC 29981,
Davis Ac1,
ICMP 6575,
Watson M2616
BELGIO
ANN1
Xylella fastidiosa subsp.
sandyi
Oleander
Riverside –
California (USA )
http://www.ncbi.nlm.nih.gov/nuccore/AAAM00
000000
OLANDA
STL
Xylella fastidiosa subsp.
fastidiosa Wells et al.
Grape
Napa-
California (USA )
ATCC®
700963™
OLANDA
TEM1
Xylella fastidiosa subsp.
fastidiosa Wells et al.
Grape
Temecula –
California (USA )
1998 OLANDA
2. DIXON
X. fastidiosa subsp.multiplex
Almond
Solano-
California (USA)
OLANDA
ALS4
X. fastidiosa subsp.multiplex
Almond
San Joaquin
California (USA)
OLANDA
*LMG = BCCM/LMG Bacteria Collection Lab. for Microbiology Ghent University (BELGIUM)
**ATCC= American Type Culture Collection