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CHAPTER 27
URINARY TRACT
INFECTIONS
Part III
Microbiology as Applied to Infectious
Diseases
Universities Press
3-6-747/1/A & 3-6-754/1, Himayatnagar
Hyderabad 500 029 (A.P.), India
Email: info@universitiespress.com
marketing@universitiespress.com
Phone: 040-2766 5446/5447
Dr Sonal Saxena, MD
Director Professor and Head of the Department of Microbiology
Maulana Azad Medical College,
New Delhi
and
Dr Amala A Andrews, MD
Maulana Azad Medical College,
New Delhi
UNIVERSITIES PRESS PVT LTD
INTRODUCTION
Urinary tract infections (UTIs) affects all age groups
Most common UTIs are those of the bladder (cystitis) and the renal
pelvis or the kidneys (pyelonephritis)
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TYPES OF UTI
Anatomically classified as
Upper UTI: Involves the kidney or ureter
Acute pyelitis—infection of the pelvis of the kidney
Acute pyelonephritis—infection of the parenchyma of the
kidney
Lower UTI: Involves infection from the urinary bladder
downwards
Urethritis—infection of the urethra
Acute urethral syndrome (in women, it is often caused by
Chlamydia)
Cystitis—infection of the urinary bladder
Prostatitis—infection of the prostate
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TYPES OF UTI
Based on how it is acquired, UTI may be classified
as
Community-acquired
Hospital-acquired (Chapter 11)
UTI can present as :
Acute UTI
Chronic UTI
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PREDISPOSING FACTORS FOR UTIs
Age: The incidence of UTI increases with age
Gender: Young and sexually active females are specifically prone to the infection
Pregnancy: Increases the risk of UTIs
Structural and functional abnormalities of the urinary tract: Increased risk of UTI
Metabolic factors: Diabetes mellitus increases the risk of UTIs
Interventions: Instrumentation including catheterization and any surgical procedure may
result in a UTI
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PATHOGENESIS
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Bacteria ascend from the anterior urethra through the column of
urine
If there is stasis of the urine either in the bladder or ureters due to
neurogenic or mechanical causes, the microorganisms colonise
and establish infection
Hematogenous spread to the urinary tract occurs in less than 2%
of cases
Factors influencing establishment of infection
•Host factors (gender, age and familial predisposition)
•Microorganism (presence of type 1 pili [fimbriae]) or adhesins, e.g.,
uropathogenic E. coli
•Environmental factors (vaginal colonisers, pH, anatomic and functional
abnormalities...)
ETIOLOGY
Table 27.1 Etiological agents of urinary
tract infections
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CLINICAL FEATURES
Asymptomatic bacteriuria
Symptomatic UTI: The common symptoms include urgency and frequency of micturition
associated with discomfort or pain
Cystitis(lower UTI): Dysuria, fever with chills and frequency
Pyelonephritis or pyelitis (upper UTI): Flank or loin pain, tenderness, high fever and rigor
Infants and children with UTI: Fever, vomiting, diarrhea and poor feeding
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LABORATORY
DIAGNOSIS
Fig. 27.1 Flowchart of the approach to the diagnosis of
urinary tract infections
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SPECIMEN COLLECTION
Fig. 27.2 Types of urine samples to be collected
(MSU—midstream urine; CSU—catheter
sample of urine; EMU—early morning urine)
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TRANSPORT
At room temperature within half an hour or refrigerated
at 4°C for up to four hours
Beyond this time, such a sample should not be
processed for bacterial culture
If delay expected, a special container with 1.8% boric
acid is provided, in which urine, which can be kept at
room temperature for up to 24 hours
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UNIVERSITIES PRESS PVT LTD
Microscopy
An uncentrifuged sample is examined by direct microscopy for pus cells and bacteria.
presence of pus cells and bacteria in large numbers  bacterial infection of the urinary tact
Screening
For the presumptive diagnosis of significant bacteriuria
Dipstick tests
i) Griess nitrite test: Presence of nitrite indicates the presence of nitrite-reducing bacteria in
urine.
ii) Leukocyte esterase test: Positive dipstick test helps in diagnosing cystitis
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iii) Catalase test: positive in bacteriuria and hematuria
iv) Triphenyl tetrazolium chloride (TTC) test: positive indicates presence of bacteria
v) Gram stain
vi) Glucose test paper tests
vii) Dip slide culture
None of the screening methods is as sensitive or reliable as culture
CULTURE
Quantitative culture provides an estimate of the total number of bacteria in 1 mL of
urine
Pour plate method
Semi-quantitative culturing is done on blood agar or MacConkey agar with a
standard calibrated loop
A colony count of 105/mL is considered significant.
Counts between 104/mL and 105/mL are of uncertain significance.
UNIVERSITIES PRESS PVT LTD
UNIVERSITIES PRESS PVT LTD
Counts less than this are considered significant if:
The patient is already on antibiotics
There is an obstruction in the urinary tract
A fungal infection is present
Pyelonephritis is present
The specimen has been collected by suprapubic aspiration
Fig. 27.3 Semi-quantitative culture of
urine using a calibrated inoculation
loop
CULTURE
If ≥3 types of organisms are grown, these are considered as
contaminants, which may have been introduced into the urine
sample from the perineal region or skin or external urethral
meatus due to improper collection
Detection of antibody-coated bacteria differentiates upper UTI
(involvement of the kidney) from lower UTI
Upper UTI results in antibody response, which allows the
antibody to coat the microorganism
Can be detected in the urine by immunofluorescence using
antihuman immunoglobulin tagged to a fluorescent dye
Antibiotic sensitivity testing is done
UNIVERSITIES PRESS PVT LTD
CULTURE
TREATMENT
Community-onset UTI can be treated with
ciprofloxacin and nitrofurantoin (for out-patients)
For complicated UTI and those with renal involvement,
a higher antibiotic like third-generation cephalosporin or
ceftriaxone may be given
In case of hospital-acquired UTI and/or catheter-
associated UTI, carbapenems or
piperacillin/tazobactam may be given
Prescribe appropriate antibiotics only after a sensitivity
report becomes available.
UNIVERSITIES PRESS PVT LTD

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Chapter27.pptx

  • 1. CHAPTER 27 URINARY TRACT INFECTIONS Part III Microbiology as Applied to Infectious Diseases Universities Press 3-6-747/1/A & 3-6-754/1, Himayatnagar Hyderabad 500 029 (A.P.), India Email: info@universitiespress.com marketing@universitiespress.com Phone: 040-2766 5446/5447
  • 2. Dr Sonal Saxena, MD Director Professor and Head of the Department of Microbiology Maulana Azad Medical College, New Delhi and Dr Amala A Andrews, MD Maulana Azad Medical College, New Delhi UNIVERSITIES PRESS PVT LTD
  • 3. INTRODUCTION Urinary tract infections (UTIs) affects all age groups Most common UTIs are those of the bladder (cystitis) and the renal pelvis or the kidneys (pyelonephritis) UNIVERSITIES PRESS PVT LTD
  • 4. TYPES OF UTI Anatomically classified as Upper UTI: Involves the kidney or ureter Acute pyelitis—infection of the pelvis of the kidney Acute pyelonephritis—infection of the parenchyma of the kidney Lower UTI: Involves infection from the urinary bladder downwards Urethritis—infection of the urethra Acute urethral syndrome (in women, it is often caused by Chlamydia) Cystitis—infection of the urinary bladder Prostatitis—infection of the prostate UNIVERSITIES PRESS PVT LTD
  • 5. TYPES OF UTI Based on how it is acquired, UTI may be classified as Community-acquired Hospital-acquired (Chapter 11) UTI can present as : Acute UTI Chronic UTI UNIVERSITIES PRESS PVT LTD
  • 6. PREDISPOSING FACTORS FOR UTIs Age: The incidence of UTI increases with age Gender: Young and sexually active females are specifically prone to the infection Pregnancy: Increases the risk of UTIs Structural and functional abnormalities of the urinary tract: Increased risk of UTI Metabolic factors: Diabetes mellitus increases the risk of UTIs Interventions: Instrumentation including catheterization and any surgical procedure may result in a UTI UNIVERSITIES PRESS PVT LTD
  • 7. PATHOGENESIS UNIVERSITIES PRESS PVT LTD Bacteria ascend from the anterior urethra through the column of urine If there is stasis of the urine either in the bladder or ureters due to neurogenic or mechanical causes, the microorganisms colonise and establish infection Hematogenous spread to the urinary tract occurs in less than 2% of cases Factors influencing establishment of infection •Host factors (gender, age and familial predisposition) •Microorganism (presence of type 1 pili [fimbriae]) or adhesins, e.g., uropathogenic E. coli •Environmental factors (vaginal colonisers, pH, anatomic and functional abnormalities...)
  • 8. ETIOLOGY Table 27.1 Etiological agents of urinary tract infections UNIVERSITIES PRESS PVT LTD
  • 9. CLINICAL FEATURES Asymptomatic bacteriuria Symptomatic UTI: The common symptoms include urgency and frequency of micturition associated with discomfort or pain Cystitis(lower UTI): Dysuria, fever with chills and frequency Pyelonephritis or pyelitis (upper UTI): Flank or loin pain, tenderness, high fever and rigor Infants and children with UTI: Fever, vomiting, diarrhea and poor feeding UNIVERSITIES PRESS PVT LTD
  • 10. LABORATORY DIAGNOSIS Fig. 27.1 Flowchart of the approach to the diagnosis of urinary tract infections UNIVERSITIES PRESS PVT LTD
  • 11. SPECIMEN COLLECTION Fig. 27.2 Types of urine samples to be collected (MSU—midstream urine; CSU—catheter sample of urine; EMU—early morning urine) UNIVERSITIES PRESS PVT LTD
  • 12. TRANSPORT At room temperature within half an hour or refrigerated at 4°C for up to four hours Beyond this time, such a sample should not be processed for bacterial culture If delay expected, a special container with 1.8% boric acid is provided, in which urine, which can be kept at room temperature for up to 24 hours UNIVERSITIES PRESS PVT LTD
  • 13. UNIVERSITIES PRESS PVT LTD Microscopy An uncentrifuged sample is examined by direct microscopy for pus cells and bacteria. presence of pus cells and bacteria in large numbers  bacterial infection of the urinary tact Screening For the presumptive diagnosis of significant bacteriuria Dipstick tests i) Griess nitrite test: Presence of nitrite indicates the presence of nitrite-reducing bacteria in urine. ii) Leukocyte esterase test: Positive dipstick test helps in diagnosing cystitis
  • 14. UNIVERSITIES PRESS PVT LTD iii) Catalase test: positive in bacteriuria and hematuria iv) Triphenyl tetrazolium chloride (TTC) test: positive indicates presence of bacteria v) Gram stain vi) Glucose test paper tests vii) Dip slide culture None of the screening methods is as sensitive or reliable as culture
  • 15. CULTURE Quantitative culture provides an estimate of the total number of bacteria in 1 mL of urine Pour plate method Semi-quantitative culturing is done on blood agar or MacConkey agar with a standard calibrated loop A colony count of 105/mL is considered significant. Counts between 104/mL and 105/mL are of uncertain significance. UNIVERSITIES PRESS PVT LTD
  • 16. UNIVERSITIES PRESS PVT LTD Counts less than this are considered significant if: The patient is already on antibiotics There is an obstruction in the urinary tract A fungal infection is present Pyelonephritis is present The specimen has been collected by suprapubic aspiration Fig. 27.3 Semi-quantitative culture of urine using a calibrated inoculation loop CULTURE
  • 17. If ≥3 types of organisms are grown, these are considered as contaminants, which may have been introduced into the urine sample from the perineal region or skin or external urethral meatus due to improper collection Detection of antibody-coated bacteria differentiates upper UTI (involvement of the kidney) from lower UTI Upper UTI results in antibody response, which allows the antibody to coat the microorganism Can be detected in the urine by immunofluorescence using antihuman immunoglobulin tagged to a fluorescent dye Antibiotic sensitivity testing is done UNIVERSITIES PRESS PVT LTD CULTURE
  • 18. TREATMENT Community-onset UTI can be treated with ciprofloxacin and nitrofurantoin (for out-patients) For complicated UTI and those with renal involvement, a higher antibiotic like third-generation cephalosporin or ceftriaxone may be given In case of hospital-acquired UTI and/or catheter- associated UTI, carbapenems or piperacillin/tazobactam may be given Prescribe appropriate antibiotics only after a sensitivity report becomes available. UNIVERSITIES PRESS PVT LTD