Antarctic Observatory Systems
The Antarctic Biodiversity Portal, an Antarctic VRE
Anton Van de Putte
25 January 2019
Ostend Belgium
Community effort
Area of Interest
AntaBIS VRE
Access Analyze Develop
Biodiversity.aq
DATA
RAS
IPT
AFG
mARS
WWW
ATLAS
code
Taxonomic Backbone
Lifewatch Taxonomic
Backbone
WoRMS
RASRAMS
RAS
RAMS RAS
ACCESS
(meta)DATA
IPT
DWC-A
Data
paper
Metadata
Checklist
Occurrence
Event-Core
DATA
Data.biodiversity.aq
DATA
ANALYSE
• Some tools available
• AtlasR
• Biotaxa
• Currently packages for use on stand alone
system
• Future: run R server in order to run these R
tools online using the Lifewatch infrastructure
in Spain
45°S
55°S
65°S
75°S
0°
30°W 30°E
150°E150°W
180°
60°E60°W
90°E90°W
120°E120°W
Legend
Value
High : 0.994270
Low : 0.001170
45°S
55°S
65°S
75°S
0°
30°W 30°E
150°E150°W
180°
60°E60°W
90°E90°W
120°E120°W
Legend
euphau_pres-abs
Euphausia6
0
1
GUI
Code
Github
Polar
Macroscope
AtlasR
Biotaxa
RAS
DEVELOP
CODE
solong
This R package provides allometric equations that
relate the body size of Southern Ocean taxa to their
body part measurements
Sohungry
This R package provides access to the SCAR
Southern Ocean Diet and Energetics Database
Antanym
This R package provides easy access to Antarctic
geographic place name information.
Linkage to other
projects
RAATD
• Retrospective Analysis of
Antarctic Tracking data
• > 70 contributors
• 12 national Antarctic
programs
• 17 predator species
• 4060 individual animals
• 2.9 million observed
locations
DATA code
Quantarctica
A Cross-Platform, Full-Featured, Free
GIS for Antarctic Research
http://quantarctica.npolar.no
quantarctica@npolar.no
Original data quality
Peer-reviewed datasets
Import and analyze your own data
Field-tested: runs entirely offline
Production-quality map and figure
design tools
Free and open publication and
redistribution
Metadata and citation
information included
Quantarctica v3 under development now – get a sneak preview
Biology
Atmosphere
Environmental
managment
Geology
Geophysics
Oceanography
Sea Ice
http://www.soos.aq
Southern Ocean Observation System
Polar Federated
Search
• Collaboration between
– Southern Ocean Observation System
– Arctic Data Committee
– Standing Committee of Antarctic data managers
Thank you

Antarctic Observatory System

Editor's Notes

  • #12 Biotaxa is a analytical and visualisation tool to explain and predict the discovery of taxonomic diversity. It looks at (1) how well a model can plan the growth of taxonomic diversity in a region, (2) how confident one can be in explaining the growth of the taxonomic diversity, (3) what would be the likely gaps of taxonomic diversity. Users can harness the power of the provided functions to estimate the taxonomic diversity they are interested in a region.   
  • #17 SOOS is an international initiative with the mission to facilitate the collection and delivery of essential observations on dynamics and change of Southern Ocean systems to all international stakeholders (researchers, governments, industries), through design, advocacy and implementation of cost-effective observing and data delivery systems. The Antarctic Biodiversity portal advises on key datasets to contribute to SOOSmap and on data flows towards SOOSmap (through OBIS).