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RESEARCH NEWS & VIEWS

the medium after cell growth indicated that a         of the few well-characterized examples is the               roles of THI4p is as yet unknown, but one
component required for THI4p activity might           protein Ada, which repairs methylated lesions               possibility posed by Chatterjee et al. is that the
be missing. However, addition of iron(ii)             in DNA3. Reactivation of THI4p containing                   protein helps to mop up any excess intracellu-
(Fe2+) to the minimal-growth medium mark-             the Dha residue has so far proved impos-                    lar Fe2+, thereby preventing chemical reactions
edly increased the formation of compound 3            sible. Experiments with cultured cells show                 that can produce damaging reactive oxygen
(Fig. 1). The reaction is extremely selective         that thiamine and THI4p accumulate in a 1:1                 species. ■
for Fe2+, so the authors concluded that Fe2+          ratio during growth, consistent with THI4p
must be necessary for the sulphur-transfer            functioning as a ‘one-shot’ reagent and not                 Peter Roach is at the School of Chemistry,
reaction.                                             being recycled by the cellular machinery. The               University of Southampton, Southampton
   The thiazole-forming reaction could now            reaction results in the build-up of inactivated             SO17 1BJ, UK.
be reconstituted in vitro from NAD using              (Dha 205) THI4p until it comprises about 1.5%               e-mail: p.l.roach@soton.ac.uk
intact THI4p protein. The reaction showed             of total cellular protein4.
                                                                                                                  1. Chatterjee, A. et al. Nature 478, 542–546 (2011).
conversion of NAD through to compound 1                  These observations1 raise interesting ques-              2. Chatterjee, A., Jurgenson, C. T., Schroeder, F. C.,
(Fig. 1), and addition of Fe2+ completed the          tions, such as why a protein should be used as                 Ealick, S. E. & Begley, T. P. J. Am. Chem. Soc. 129,
transformation to the final thiazole product, 3.      a sulphur donor and why the inactive protein                   2914–2922 (2007).
Chatterjee et al. found that each molecule of         should not undergo rapid degradation and its                3. Sedgwick, B., Robins, P., Totty, N. & Lindahl, T. J. Biol.
                                                                                                                     Chem. 263, 4430–4433 (1988).
THI4p accounted for the production of a               amino acids be recycled. As Chatterjee et al.               4. Faou, P. & Tropschug, M. J. Mol. Biol. 344,
single molecule of thiazole, observing a clear        note, this accumulation of THI4p implies                       1147–1157 (2004).
1:1 correlation between the loss of sulphur           that the inactive protein has another cellular              5. Machado, C. R. et al. J. Mol. Biol. 273, 114–121
from THI4p and formation of the thiazole              function. Indeed, inactivated THI4p has been                   (1997).
                                                                                                                  6. Ruiz-Roldán, C. et al. Fungal Genet. Biol. 45, 6–16
product.                                              implicated in DNA protection and other stress                  (2008).
   The deployment of a protein as such a meta-        responses5–7. The biochemical mechanism                     7. Medina-Silva, R. et al. Res. Microbiol. 157, 275–281
bolic reagent is extremely rare in biology. One       linking the biosynthetic and stress-response                   (2006).



 P L ANE TARY SCIENCE                                                                                             from Earth as Earth is from the Sun. Eris is
                                                                                                                  the most distant Solar System object to be suc-

Eris under scrutiny                                                                                               cessfully observed by this technique, a notable
                                                                                                                  achievement.
                                                                                                                     The authors find that Eris has a radius of
                                                                                                                  1,163±6 kilometres, which is smaller and has
A stellar occultation by the dwarf planet Eris provides a new estimate of its size.                               significantly less margin of error than the pre-
It also reveals a surprisingly bright planetary surface, which could indicate the                                 vious measurements of 1,200±100 km (ref. 3)
relatively recent condensation of a putative atmosphere. See Letter p   .493                                      and 1,500±200 km (ref. 4). Ironically, Sicardy
                                                                                                                  and colleagues’ results cannot definitively
                                                                                                                  state whether Eris is larger than Pluto. The
AMANDA GULBIS                                         probably awaiting detection. A great debate                 ambiguity is due to the fact that Pluto’s atmos-
                                                      ensued as to whether Eris and other large, yet-             phere prevents accurate measurement of its


P
       luto has long reigned as the smallest and      to-be-detected Kuiper-belt objects — even                   surface location, rather than being due to any
       most distant planet in our Solar System.       Pluto itself — should be considered planets.                deficiency in the Eris observations. A more
       In 1992, the discovery1 of another body        This debate forced the astronomical commu-                  interesting result from the authors’ study5 is
in roughly the same region proved that Pluto          nity to rethink the definition of a planet. As              the possibility that Eris has a collapsed atmos-
was not alone and launched a new frontier of          a result, the definition was changed in 2006                phere (frozen to the surface), or a localized
study in planetary science — the Kuiper belt,         and both Pluto and Eris were reclassified as                atmosphere under certain conditions.
the region at and beyond Neptune’s orbit in           dwarf planets. Rarely in the course of modern                  Sicardy et al. demonstrate that Eris has no
which the two bodies reside. More than 1,000          research has an astronomical discovery gen-                 atmosphere at present and that a surprisingly
Kuiper-belt objects have since been discov-           erated such widespread debate and emotional                 large amount of light is reflected from its sur-
ered. These objects consist mainly of ices and        reaction among both scientists and the general              face. This unusually bright surface is difficult
are typically located away from Earth at 30–50        public — it turns out that Eris was aptly named             to reconcile with the idea that objects in the
times the distance between Earth and the Sun.         after the Greek goddess of strife and discord.              outer Solar System become darkened by cos-
One particular object, later named Eris, caught          The stellar-occultation technique, in which              mic rays and micrometeorite impacts over
the attention of astronomers because initial          a star is observed to pass behind a foreground              time. The new observations could thus sup-
size estimates based on proposed values for its       object (in this case, Eris), has proven to be an            port a long-standing theory that, as a large, icy,
surface reflectance showed that it was probably       effective method for discovering and charac-                Kuiper-belt object approaches the Sun during
larger than Pluto2. Subsequent direct imag-           terizing features of Solar System bodies. Only a            its orbit, a putative atmosphere could sublimate
ing suggested3 that Eris was about 5% larger          handful of large Kuiper-belt objects have been              and then condense out as the object moves
than Pluto, whereas detection of Eris’s ther-         observed to occult stars, and each occultation              farther away. Eris is currently far away from
mal radiation indicated4 that the planet was          has revealed something new and interesting,                 the Sun in its 557-year orbit, and although
substantially larger than Pluto. On page 493          such as an unexpectedly bright surface on                   the results do not prove that an atmosphere
of this issue, Sicardy et al.5 use the powerful       Kuiper-belt object 55636 (ref. 6), or waves in              ever existed, the bright surface could indicate
technique of stellar occultation to derive the        the upper atmosphere of Pluto7,8. These results             relatively recent condensation.
most detailed information to date on Eris’s size      have led to reconsideration of ideas about how                 The discovery of Eris and other Kuiper-belt
and other physical traits.                            objects in the outer Solar System are formed                objects allows Pluto, a seemingly unique object
   The discovery2 of Eris in the Kuiper belt          and evolve. Sicardy et al. 5 predicted and                  for so many years, to be placed in a broader
sparked the realization that more planets in          observed the occurrence of a stellar occulta-               perspective. Investigation of the bulk proper-
the outer reaches of the Solar System were            tion when Eris was nearly 100 times as distant              ties of a large number of Kuiper-belt objects

4 6 4 | NAT U R E | VO L 4 7 8 | 2 7 O C T O B E R 2 0 1 1
                                                       © 2011 Macmillan Publishers Limited. All rights reserved
NEWS & VIEWS RESEARCH

has provided insight into the formation,            obtain additional stellar-occultation data for             1. Jewitt, D. & Luu, J. Nature 362, 730–732 (1993).
evolution and dynamical histories of these          Eris as well as for other Kuiper-belt objects.             2. Brown, M. E., Trujillo, C. A. & Rabinowitz, D. L.
                                                                                                                  Astrophys. J. 635, L97–L100 (2005).
bodies. We now expect that there are hundreds       Whether they are called planets or not, there
                                                                                                               3. Brown, M. E., Schaller, E. L., Roe, H. G., Rabinowitz,
of objects that will eventually be classified       is clearly still much to learn about these distant,           D. L. & Trujillo, C. A. Astrophys. J. 643, L61–L63
as dwarf planets. Because Eris is the only          icy bodies. ■                                                 (2006).
body similar to Pluto for which detailed                                                                       4. Bertoldi, F., Altenhoff, W., Weiss, A., Menten, K. M. &
stellar-occultation data are available, Sicardy     Amanda Gulbis is at the Southern                              Thum, C. Nature 439, 563–564 (2006).
                                                                                                               5. Sicardy, B. et al. Nature 478, 493–496 (2011).
and colleagues’ results5 represent a major          African Large Telescope and South African
                                                                                                               6. Elliot, J. L. et al. Nature 465, 897–900 (2010).
step forward in our knowledge about large           Astronomical Observatory, 7935 Cape Town,                  7. Person, M. J. et al. Astron. J. 136, 1510–1518 (2008).
Kuiper-belt objects.                                South Africa.                                              8. McCarthy, D. W. et al. Astron. J. 136, 1519–1522
   Future attempts will certainly be made to        e-mail: amanda@salt.ac.za                                     (2008).



  G E NOMICS                                                                                                   generated all later lineages of Y. pestis, includ-
                                                                                                               ing those responsible for the ‘Asian’ (or mod-

Plague’s progress                                                                                              ern) plague pandemic that has spread globally
                                                                                                               since the nineteenth century. Interestingly, the
                                                                                                               greatest genetic diversity of Y. pestis is observed5
                                                                                                               in China, suggesting that most plague epidem-
The Black Death was one of the most devastating pandemics in human history.                                    ics originated in this region. Third, Bos et al.1
The first complete genome sequence of the causative Yersinia pestis bacterium                                  suggest that the genetic similarity between the
provides a fresh perspective on plague evolution. See Letter p.506                                             ES strain and contemporary strains of Y. pestis
                                                                                                               that are associated with less severe epidemics
                                                                                                               indicates that the high mortality of the Black
E D WA R D C . H O L M E S                                                                                     Death was not simply a function of the bacterial




                                                                                                                                                                            THE BRITISH LIBRARY/HIP/TOPFOTO
                                                                                                               strain involved. Given the small sample size of


T
        he Black Death was a pandemic of almost                                                                the authors’ study, this assertion must be treated
        unprecedented scale. It is estimated                                                                   with caution, but the availability of a complete
        that 30–50% of Europe’s population                                                                     genome of Y. pestis from the Black Death should
perished from the plague between 1347 and                                                                      make the hypothesis experimentally testable.
1351. As might be expected from such a                                                                            Although the recovery and sequencing of the
remarkable level of mortality, this pestilence                                                                 ES strain confirms the role of Y. pestis in the
had a profound impact on medieval society.                                                                     Black Death, it also raises questions about the
For example, it greatly influenced the depic-                                                                  cause of two earlier major disease pandemics
tion of death in art (Fig. 1), and acted as the                                                                previously assigned to Y. pestis: one that spread
driving force for the establishment of some                                                                    through parts of Africa, Asia and Europe in
of the first public-health measures, although                                                                  AD 541–542, during the reign of the Roman
these were generally futile. It has long been                                                                  emperor Justinian and, more tentatively, the
supposed that the Black Death, like all plague                                                                 plague of Athens (430–426 BC), which was
epidemics since, was caused by the bacterium                                                                   evocatively described in the writings of the
Yersinia pestis in a transmission cycle involving                                                              Greek historian Thucydides. Bacterial DNA has
fleas, rats and humans. But the evolutionary                                                                   purportedly been recovered from both of these
relationships between Y. pestis strains from                                                                   epidemics, although in the case of the plague
different plague epidemics have been less                                                                      of Athens, the DNA was attributed6 to the Sal-
clear. On page 506 of this issue, Bos et al.1                                                                  monella enterica serovar Typhi bacterium that
describe the first complete genome sequence                                                                    causes typhoid fever, rather than to Y. pestis.
of Y. pestis from Black Death victims, and                                                                     However, the Athenian Salmonella strain is not
show that this pandemic was a pivotal event in                                                                 actually closely related to that responsible for
plague evolution.                                                                                              typhoid7, suggesting that the ancient DNA had
                                                    Figure 1 | The last rites. In this fourteenth-century
   Obtaining bacterial DNA that is almost                                                                      been contaminated by DNA from a modern,
                                                    picture, a victim of the Black Death is attacked by
700 years old presents a number of challenges,      a devil, while a priest reads the last rites and God       soil-living Salmonella species. The cause of the
prominent among them the risk of inadvertent        watches from above.                                        plague of Athens therefore remains a mystery.
contamination by DNA from other sources1,2.                                                                       The DNA supposedly from the Justinian
Bos et al. extracted bacterial DNA from five        phylogenetic trees, strongly suggest that the              plague is certainly that of Y. pestis, but the
teeth of plague victims taken from a burial pit     obtained genome sequence is an authentic                   close similarity between the ‘Justinian’ DNA
at East Smithfield (ES) in London, which was        representative of the Black Death pathogen.                and that of modern Y. pestis variants8 suggests
established at the height of the pandemic in           The ES strain is significant for several rea-           that the former strain may not be authentic.
1348–49. The key methodological advance             sons. First, in combination with studies of par-           Importantly, if all contemporary strains
in their work was the use of a molecular cap-       tial genome sequences of Y. pestis from Black              of Y. pestis are derived from the Black Death,
ture assay that assisted in the detection of        Death victims3, it demonstrates beyond doubt               as suggested by Bos and colleagues1, then
Y. pestis DNA amid a background of host and         that Y. pestis was the true cause of the Black             both of the earlier epidemics were caused
environmental DNA. The stringent laboratory         Death, despite claims to the contrary4. Second,            either by a strain of Y. pestis that has left
procedures used by the authors, the observed        the fact that the ES strain falls at the base of           no contemporary descendants, or by an
patterns of mutational damage in the DNA,           a phylogenetic tree that links contemporary                entirely different organism. Ancient DNA
and the finding that the ES strain is ances-        Y. pestis genomes suggests that the Black Death            may be central to resolving this question.
tral to all contemporary Y. pestis strains on       was a crucial event in plague evolution that                  The analysis of ancient DNA is a powerful

                                                                                                         2 7 O C T O B E R 2 0 1 1 | VO L 4 7 8 | NAT U R E | 4 6 5
                                                    © 2011 Macmillan Publishers Limited. All rights reserved

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478464a

  • 1. RESEARCH NEWS & VIEWS the medium after cell growth indicated that a of the few well-characterized examples is the roles of THI4p is as yet unknown, but one component required for THI4p activity might protein Ada, which repairs methylated lesions possibility posed by Chatterjee et al. is that the be missing. However, addition of iron(ii) in DNA3. Reactivation of THI4p containing protein helps to mop up any excess intracellu- (Fe2+) to the minimal-growth medium mark- the Dha residue has so far proved impos- lar Fe2+, thereby preventing chemical reactions edly increased the formation of compound 3 sible. Experiments with cultured cells show that can produce damaging reactive oxygen (Fig. 1). The reaction is extremely selective that thiamine and THI4p accumulate in a 1:1 species. ■ for Fe2+, so the authors concluded that Fe2+ ratio during growth, consistent with THI4p must be necessary for the sulphur-transfer functioning as a ‘one-shot’ reagent and not Peter Roach is at the School of Chemistry, reaction. being recycled by the cellular machinery. The University of Southampton, Southampton The thiazole-forming reaction could now reaction results in the build-up of inactivated SO17 1BJ, UK. be reconstituted in vitro from NAD using (Dha 205) THI4p until it comprises about 1.5% e-mail: p.l.roach@soton.ac.uk intact THI4p protein. The reaction showed of total cellular protein4. 1. Chatterjee, A. et al. Nature 478, 542–546 (2011). conversion of NAD through to compound 1 These observations1 raise interesting ques- 2. Chatterjee, A., Jurgenson, C. T., Schroeder, F. C., (Fig. 1), and addition of Fe2+ completed the tions, such as why a protein should be used as Ealick, S. E. & Begley, T. P. J. Am. Chem. Soc. 129, transformation to the final thiazole product, 3. a sulphur donor and why the inactive protein 2914–2922 (2007). Chatterjee et al. found that each molecule of should not undergo rapid degradation and its 3. Sedgwick, B., Robins, P., Totty, N. & Lindahl, T. J. Biol. Chem. 263, 4430–4433 (1988). THI4p accounted for the production of a amino acids be recycled. As Chatterjee et al. 4. Faou, P. & Tropschug, M. J. Mol. Biol. 344, single molecule of thiazole, observing a clear note, this accumulation of THI4p implies 1147–1157 (2004). 1:1 correlation between the loss of sulphur that the inactive protein has another cellular 5. Machado, C. R. et al. J. Mol. Biol. 273, 114–121 from THI4p and formation of the thiazole function. Indeed, inactivated THI4p has been (1997). 6. Ruiz-Roldán, C. et al. Fungal Genet. Biol. 45, 6–16 product. implicated in DNA protection and other stress (2008). The deployment of a protein as such a meta- responses5–7. The biochemical mechanism 7. Medina-Silva, R. et al. Res. Microbiol. 157, 275–281 bolic reagent is extremely rare in biology. One linking the biosynthetic and stress-response (2006). P L ANE TARY SCIENCE from Earth as Earth is from the Sun. Eris is the most distant Solar System object to be suc- Eris under scrutiny cessfully observed by this technique, a notable achievement. The authors find that Eris has a radius of 1,163±6 kilometres, which is smaller and has A stellar occultation by the dwarf planet Eris provides a new estimate of its size. significantly less margin of error than the pre- It also reveals a surprisingly bright planetary surface, which could indicate the vious measurements of 1,200±100 km (ref. 3) relatively recent condensation of a putative atmosphere. See Letter p .493 and 1,500±200 km (ref. 4). Ironically, Sicardy and colleagues’ results cannot definitively state whether Eris is larger than Pluto. The AMANDA GULBIS probably awaiting detection. A great debate ambiguity is due to the fact that Pluto’s atmos- ensued as to whether Eris and other large, yet- phere prevents accurate measurement of its P luto has long reigned as the smallest and to-be-detected Kuiper-belt objects — even surface location, rather than being due to any most distant planet in our Solar System. Pluto itself — should be considered planets. deficiency in the Eris observations. A more In 1992, the discovery1 of another body This debate forced the astronomical commu- interesting result from the authors’ study5 is in roughly the same region proved that Pluto nity to rethink the definition of a planet. As the possibility that Eris has a collapsed atmos- was not alone and launched a new frontier of a result, the definition was changed in 2006 phere (frozen to the surface), or a localized study in planetary science — the Kuiper belt, and both Pluto and Eris were reclassified as atmosphere under certain conditions. the region at and beyond Neptune’s orbit in dwarf planets. Rarely in the course of modern Sicardy et al. demonstrate that Eris has no which the two bodies reside. More than 1,000 research has an astronomical discovery gen- atmosphere at present and that a surprisingly Kuiper-belt objects have since been discov- erated such widespread debate and emotional large amount of light is reflected from its sur- ered. These objects consist mainly of ices and reaction among both scientists and the general face. This unusually bright surface is difficult are typically located away from Earth at 30–50 public — it turns out that Eris was aptly named to reconcile with the idea that objects in the times the distance between Earth and the Sun. after the Greek goddess of strife and discord. outer Solar System become darkened by cos- One particular object, later named Eris, caught The stellar-occultation technique, in which mic rays and micrometeorite impacts over the attention of astronomers because initial a star is observed to pass behind a foreground time. The new observations could thus sup- size estimates based on proposed values for its object (in this case, Eris), has proven to be an port a long-standing theory that, as a large, icy, surface reflectance showed that it was probably effective method for discovering and charac- Kuiper-belt object approaches the Sun during larger than Pluto2. Subsequent direct imag- terizing features of Solar System bodies. Only a its orbit, a putative atmosphere could sublimate ing suggested3 that Eris was about 5% larger handful of large Kuiper-belt objects have been and then condense out as the object moves than Pluto, whereas detection of Eris’s ther- observed to occult stars, and each occultation farther away. Eris is currently far away from mal radiation indicated4 that the planet was has revealed something new and interesting, the Sun in its 557-year orbit, and although substantially larger than Pluto. On page 493 such as an unexpectedly bright surface on the results do not prove that an atmosphere of this issue, Sicardy et al.5 use the powerful Kuiper-belt object 55636 (ref. 6), or waves in ever existed, the bright surface could indicate technique of stellar occultation to derive the the upper atmosphere of Pluto7,8. These results relatively recent condensation. most detailed information to date on Eris’s size have led to reconsideration of ideas about how The discovery of Eris and other Kuiper-belt and other physical traits. objects in the outer Solar System are formed objects allows Pluto, a seemingly unique object The discovery2 of Eris in the Kuiper belt and evolve. Sicardy et al. 5 predicted and for so many years, to be placed in a broader sparked the realization that more planets in observed the occurrence of a stellar occulta- perspective. Investigation of the bulk proper- the outer reaches of the Solar System were tion when Eris was nearly 100 times as distant ties of a large number of Kuiper-belt objects 4 6 4 | NAT U R E | VO L 4 7 8 | 2 7 O C T O B E R 2 0 1 1 © 2011 Macmillan Publishers Limited. All rights reserved
  • 2. NEWS & VIEWS RESEARCH has provided insight into the formation, obtain additional stellar-occultation data for 1. Jewitt, D. & Luu, J. Nature 362, 730–732 (1993). evolution and dynamical histories of these Eris as well as for other Kuiper-belt objects. 2. Brown, M. E., Trujillo, C. A. & Rabinowitz, D. L. Astrophys. J. 635, L97–L100 (2005). bodies. We now expect that there are hundreds Whether they are called planets or not, there 3. Brown, M. E., Schaller, E. L., Roe, H. G., Rabinowitz, of objects that will eventually be classified is clearly still much to learn about these distant, D. L. & Trujillo, C. A. Astrophys. J. 643, L61–L63 as dwarf planets. Because Eris is the only icy bodies. ■ (2006). body similar to Pluto for which detailed 4. Bertoldi, F., Altenhoff, W., Weiss, A., Menten, K. M. & stellar-occultation data are available, Sicardy Amanda Gulbis is at the Southern Thum, C. Nature 439, 563–564 (2006). 5. Sicardy, B. et al. Nature 478, 493–496 (2011). and colleagues’ results5 represent a major African Large Telescope and South African 6. Elliot, J. L. et al. Nature 465, 897–900 (2010). step forward in our knowledge about large Astronomical Observatory, 7935 Cape Town, 7. Person, M. J. et al. Astron. J. 136, 1510–1518 (2008). Kuiper-belt objects. South Africa. 8. McCarthy, D. W. et al. Astron. J. 136, 1519–1522 Future attempts will certainly be made to e-mail: amanda@salt.ac.za (2008). G E NOMICS generated all later lineages of Y. pestis, includ- ing those responsible for the ‘Asian’ (or mod- Plague’s progress ern) plague pandemic that has spread globally since the nineteenth century. Interestingly, the greatest genetic diversity of Y. pestis is observed5 in China, suggesting that most plague epidem- The Black Death was one of the most devastating pandemics in human history. ics originated in this region. Third, Bos et al.1 The first complete genome sequence of the causative Yersinia pestis bacterium suggest that the genetic similarity between the provides a fresh perspective on plague evolution. See Letter p.506 ES strain and contemporary strains of Y. pestis that are associated with less severe epidemics indicates that the high mortality of the Black E D WA R D C . H O L M E S Death was not simply a function of the bacterial THE BRITISH LIBRARY/HIP/TOPFOTO strain involved. Given the small sample size of T he Black Death was a pandemic of almost the authors’ study, this assertion must be treated unprecedented scale. It is estimated with caution, but the availability of a complete that 30–50% of Europe’s population genome of Y. pestis from the Black Death should perished from the plague between 1347 and make the hypothesis experimentally testable. 1351. As might be expected from such a Although the recovery and sequencing of the remarkable level of mortality, this pestilence ES strain confirms the role of Y. pestis in the had a profound impact on medieval society. Black Death, it also raises questions about the For example, it greatly influenced the depic- cause of two earlier major disease pandemics tion of death in art (Fig. 1), and acted as the previously assigned to Y. pestis: one that spread driving force for the establishment of some through parts of Africa, Asia and Europe in of the first public-health measures, although AD 541–542, during the reign of the Roman these were generally futile. It has long been emperor Justinian and, more tentatively, the supposed that the Black Death, like all plague plague of Athens (430–426 BC), which was epidemics since, was caused by the bacterium evocatively described in the writings of the Yersinia pestis in a transmission cycle involving Greek historian Thucydides. Bacterial DNA has fleas, rats and humans. But the evolutionary purportedly been recovered from both of these relationships between Y. pestis strains from epidemics, although in the case of the plague different plague epidemics have been less of Athens, the DNA was attributed6 to the Sal- clear. On page 506 of this issue, Bos et al.1 monella enterica serovar Typhi bacterium that describe the first complete genome sequence causes typhoid fever, rather than to Y. pestis. of Y. pestis from Black Death victims, and However, the Athenian Salmonella strain is not show that this pandemic was a pivotal event in actually closely related to that responsible for plague evolution. typhoid7, suggesting that the ancient DNA had Figure 1 | The last rites. In this fourteenth-century Obtaining bacterial DNA that is almost been contaminated by DNA from a modern, picture, a victim of the Black Death is attacked by 700 years old presents a number of challenges, a devil, while a priest reads the last rites and God soil-living Salmonella species. The cause of the prominent among them the risk of inadvertent watches from above. plague of Athens therefore remains a mystery. contamination by DNA from other sources1,2. The DNA supposedly from the Justinian Bos et al. extracted bacterial DNA from five phylogenetic trees, strongly suggest that the plague is certainly that of Y. pestis, but the teeth of plague victims taken from a burial pit obtained genome sequence is an authentic close similarity between the ‘Justinian’ DNA at East Smithfield (ES) in London, which was representative of the Black Death pathogen. and that of modern Y. pestis variants8 suggests established at the height of the pandemic in The ES strain is significant for several rea- that the former strain may not be authentic. 1348–49. The key methodological advance sons. First, in combination with studies of par- Importantly, if all contemporary strains in their work was the use of a molecular cap- tial genome sequences of Y. pestis from Black of Y. pestis are derived from the Black Death, ture assay that assisted in the detection of Death victims3, it demonstrates beyond doubt as suggested by Bos and colleagues1, then Y. pestis DNA amid a background of host and that Y. pestis was the true cause of the Black both of the earlier epidemics were caused environmental DNA. The stringent laboratory Death, despite claims to the contrary4. Second, either by a strain of Y. pestis that has left procedures used by the authors, the observed the fact that the ES strain falls at the base of no contemporary descendants, or by an patterns of mutational damage in the DNA, a phylogenetic tree that links contemporary entirely different organism. Ancient DNA and the finding that the ES strain is ances- Y. pestis genomes suggests that the Black Death may be central to resolving this question. tral to all contemporary Y. pestis strains on was a crucial event in plague evolution that The analysis of ancient DNA is a powerful 2 7 O C T O B E R 2 0 1 1 | VO L 4 7 8 | NAT U R E | 4 6 5 © 2011 Macmillan Publishers Limited. All rights reserved