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Yes, a talk
about a
statistic…
14 June
FRAGILITY INDEX
(the rise of the P value)
@kathyrowan101
de Winter and Dodou (2015) PeerJ
RCTs – best evidence
• RCTs are fundamentally hypothesis testing
instruments (a hypothesis being an educated
guess about how things work)
• RCTs are a type of scientific experiment which
aims to reduce bias when testing new/existing
treatments
RCTs – best evidence
• RCTs are fundamentally hypothesis testing
instruments (a hypothesis being an educated
guess about how things work)
• RCTs are a type of scientific experiment which
aims to reduce bias when testing new/existing
treatments
• RCTs permit the use of probability theory to
express the likelihood of a difference in
outcome between treatments/groups
P value
• P value - probability of obtaining a result equal
to or more extreme than observed when the
null hypothesis is true
P value
• P value - probability of obtaining a result equal
to or more extreme than observed when the
null hypothesis is true
• Null hypothesis H0 – default position – assumed
to be true until evidence indicates otherwise
P value
• P value - probability of obtaining a result equal
to or more extreme than observed when the
null hypothesis is true
• Null hypothesis H0 – default position – assumed
to be true until evidence indicates otherwise
• If observed data are unlikely,
then null hypothesis is rejected
• If observed data are consistent,
then null hypothesis is not rejected
An analogy might help…?
• Analogous to a criminal trial
• Defendant assumed to be innocent (null)
• Until proven guilty (null is rejected)
• Beyond reasonable doubt (agreed threshold)
P value
• P value - probability of obtaining a result equal to
or more extreme than observed when the null
hypothesis is true
• Agreed threshold traditionally set at 5% (P<0.05)
Fisher’s exact test
• Used in the analysis of contingency tables
• Used when sample sizes are small
(valid for all sample sizes)
• Calculates significance of deviation from the
null hypothesis exactly
• It can’t be calculated in your head…!
RCTs – size and events are important
Bad
outcome
Good
outcome
Treatment
A
1 99
Treatment
B
9 91
Bad
outcome
Good
outcome
Treatment
A
200 1800
Treatment
B
250 1750
P=0.02
P=0.02
Bad
outcome
Good
outcome
Treatment
A
1 2 99 98
Treatment
B
9 91
Bad
outcome
Good
outcome
Treatment
A
200 201 1800 799
Treatment
B
250 1750
P=0.06
P=0.02
P value
• P value - probability of obtaining a result equal to
or more extreme than observed when the null
hypothesis is true
• Agreed threshold traditionally set at 5% (P<0.05)
• A shift of only a few events can change
interpretation…
Bad
outcome
Good
outcome
Treatment
A
2 98
Treatment
B
9 91
Bad
outcome
Good
outcome
Treatment
A
2 98
Treatment
B
9 91
P=0.02
chi-square
P=0.06
Fisher’s
exact
P value
• P value - probability of obtaining a result equal
to or more extreme than observed when the
null hypothesis is true
• Traditionally set at 5% (P<0.05)
• A shift of only a few events can change
interpretation…
• Simple recalculation with the correct statistical
test can change interpretation…
Primary and secondary hypotheses
P value
• P value - probability of obtaining a result equal to
or more extreme than observed when the null
hypothesis is true
• Traditionally set at 5% (P<0.05)
• A shift of only a few events can change
interpretation…
• Simple recalculation with the correct test can
change interpretation…
• Significant subgroups(?!) – hypothesis generating
FRAGILITY INDEX
de Winter and Dodou (2015) PeerJ
• Calculates how many events (f) required to
change a significant to a non-significant result
• Designed for dichotomous outcomes
Table
Bad
outcome
Good
outcome
Treatment
A
4 96
Treatment
B
17 83
Table
Bad
outcome
Good
outcome
Treatment
A
5 95
Treatment
B
17 83
FRAGILITY INDEX
EQUALS FOUR
Walsh et al. 2014 Evaniew et al. 2015 Ridgeon et al. 2016
RCTs in NEJM,
Lancet, JAMA,
Annals, BMJ
(RCT in MeSH)
RCTs on spine
surgery
Multicentre (>1)
RCTs in critically ill
2004-2010 2009-2014 No date restriction
P<0.05 result
in abstract
P<0.05 result
in abstract
P<0.05 result
for mortality
RCTs=399 RCTs= 40 RCTs=56
Patients=
median 682
(IQR 15-112604)
Patients=
median 132
(IQR 79-208)
Patients=
median 127
(IQR 79-326)
Walsh et al. 2014 Evaniew et al. 2015 Ridgeon et al. 2016
RCTs in NEJM,
Lancet, JAMA,
Annals, BMJ
(RCT in MeSH)
RCTs on spine
surgery
Multicentre (>1)
RCTs in critically ill
2004-2010 2009-2014 No date restriction
P<0.05 result
in abstract
P<0.05 result
in abstract
P<0.05 result
for mortality
RCTs=399 RCTs= 40 RCTs=56
Patients=
median 682
(IQR 15-112604)
Patients=
median 132
(IQR 79-208)
Patients=
median 127
(IQR 79-326)
66% primary result 58% primary result 52% primary result
Walsh et al. 2014 Evaniew et al. 2015 Ridgeon et al. 2016
Fragility Index =
median 8
(IQR 3-18)
Fragility Index =
median 2
(IQR 1-3)
Fragility Index =
median 2
(IQR 1-3.5)
Range = 0-808 Range = 0-39 Range = 0-48
FI zero = 10% FI zero = 20% FI zero = 20%
FI ≤3 = 25% FI ≤3 = 75% FI ≤3 = 75%
FI ≤loss to
follow-up = 53%
FI ≤loss to
follow-up = 65%
FI ≤loss to
follow-up = 87.5%
Walsh et al. 2014 Evaniew et al. 2015 Ridgeon et al. 2016
Fragility Index =
median 8
(IQR 3-18)
Fragility Index =
median 2
(IQR 1-3)
Fragility Index =
median 2
(IQR 1-3.5)
Range = 0-808 Range = 0-39 Range = 0-48
FI zero = 10% FI zero = 20% FI zero = 20%
FI ≤3 = 25% FI ≤3 = 75% FI ≤3 = 75%
FI ≤loss to
follow-up = 53%
FI ≤loss to
follow-up = 65%
FI ≤loss to
follow-up = 87.5%
Fragility Index
• Significant results of many RCTs hinge on very
few events
• Results could potentially be overturned if
missing/loss to follow-up data were known
http://fragilityindex.com/
Fragility Index
• Significant results of many RCTs hinge on very
few events
• Results could potentially be overturned if
missing/loss to follow-up data were known
• Reporting of the Fragility Index may help
interpretation/over-interpretation
• You can calculate it yourself…!
http://fragilityindex.com/
Fragility Index

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Fragility Index

  • 1.
  • 2. Yes, a talk about a statistic…
  • 4. FRAGILITY INDEX (the rise of the P value) @kathyrowan101
  • 5.
  • 6. de Winter and Dodou (2015) PeerJ
  • 7. RCTs – best evidence • RCTs are fundamentally hypothesis testing instruments (a hypothesis being an educated guess about how things work) • RCTs are a type of scientific experiment which aims to reduce bias when testing new/existing treatments
  • 8.
  • 9. RCTs – best evidence • RCTs are fundamentally hypothesis testing instruments (a hypothesis being an educated guess about how things work) • RCTs are a type of scientific experiment which aims to reduce bias when testing new/existing treatments • RCTs permit the use of probability theory to express the likelihood of a difference in outcome between treatments/groups
  • 10. P value • P value - probability of obtaining a result equal to or more extreme than observed when the null hypothesis is true
  • 11.
  • 12. P value • P value - probability of obtaining a result equal to or more extreme than observed when the null hypothesis is true • Null hypothesis H0 – default position – assumed to be true until evidence indicates otherwise
  • 13. P value • P value - probability of obtaining a result equal to or more extreme than observed when the null hypothesis is true • Null hypothesis H0 – default position – assumed to be true until evidence indicates otherwise • If observed data are unlikely, then null hypothesis is rejected • If observed data are consistent, then null hypothesis is not rejected
  • 14. An analogy might help…? • Analogous to a criminal trial • Defendant assumed to be innocent (null) • Until proven guilty (null is rejected) • Beyond reasonable doubt (agreed threshold)
  • 15. P value • P value - probability of obtaining a result equal to or more extreme than observed when the null hypothesis is true • Agreed threshold traditionally set at 5% (P<0.05)
  • 16.
  • 17. Fisher’s exact test • Used in the analysis of contingency tables • Used when sample sizes are small (valid for all sample sizes) • Calculates significance of deviation from the null hypothesis exactly • It can’t be calculated in your head…!
  • 18. RCTs – size and events are important
  • 20. Bad outcome Good outcome Treatment A 1 2 99 98 Treatment B 9 91 Bad outcome Good outcome Treatment A 200 201 1800 799 Treatment B 250 1750 P=0.06 P=0.02
  • 21. P value • P value - probability of obtaining a result equal to or more extreme than observed when the null hypothesis is true • Agreed threshold traditionally set at 5% (P<0.05) • A shift of only a few events can change interpretation…
  • 22.
  • 23. Bad outcome Good outcome Treatment A 2 98 Treatment B 9 91 Bad outcome Good outcome Treatment A 2 98 Treatment B 9 91 P=0.02 chi-square P=0.06 Fisher’s exact
  • 24. P value • P value - probability of obtaining a result equal to or more extreme than observed when the null hypothesis is true • Traditionally set at 5% (P<0.05) • A shift of only a few events can change interpretation… • Simple recalculation with the correct statistical test can change interpretation…
  • 25. Primary and secondary hypotheses
  • 26.
  • 27.
  • 28. P value • P value - probability of obtaining a result equal to or more extreme than observed when the null hypothesis is true • Traditionally set at 5% (P<0.05) • A shift of only a few events can change interpretation… • Simple recalculation with the correct test can change interpretation… • Significant subgroups(?!) – hypothesis generating
  • 29.
  • 31. de Winter and Dodou (2015) PeerJ
  • 32.
  • 33. • Calculates how many events (f) required to change a significant to a non-significant result • Designed for dichotomous outcomes
  • 35.
  • 36.
  • 37.
  • 39.
  • 40.
  • 41.
  • 42.
  • 43.
  • 45.
  • 46. Walsh et al. 2014 Evaniew et al. 2015 Ridgeon et al. 2016 RCTs in NEJM, Lancet, JAMA, Annals, BMJ (RCT in MeSH) RCTs on spine surgery Multicentre (>1) RCTs in critically ill 2004-2010 2009-2014 No date restriction P<0.05 result in abstract P<0.05 result in abstract P<0.05 result for mortality RCTs=399 RCTs= 40 RCTs=56 Patients= median 682 (IQR 15-112604) Patients= median 132 (IQR 79-208) Patients= median 127 (IQR 79-326)
  • 47. Walsh et al. 2014 Evaniew et al. 2015 Ridgeon et al. 2016 RCTs in NEJM, Lancet, JAMA, Annals, BMJ (RCT in MeSH) RCTs on spine surgery Multicentre (>1) RCTs in critically ill 2004-2010 2009-2014 No date restriction P<0.05 result in abstract P<0.05 result in abstract P<0.05 result for mortality RCTs=399 RCTs= 40 RCTs=56 Patients= median 682 (IQR 15-112604) Patients= median 132 (IQR 79-208) Patients= median 127 (IQR 79-326) 66% primary result 58% primary result 52% primary result
  • 48. Walsh et al. 2014 Evaniew et al. 2015 Ridgeon et al. 2016 Fragility Index = median 8 (IQR 3-18) Fragility Index = median 2 (IQR 1-3) Fragility Index = median 2 (IQR 1-3.5) Range = 0-808 Range = 0-39 Range = 0-48 FI zero = 10% FI zero = 20% FI zero = 20% FI ≤3 = 25% FI ≤3 = 75% FI ≤3 = 75% FI ≤loss to follow-up = 53% FI ≤loss to follow-up = 65% FI ≤loss to follow-up = 87.5%
  • 49. Walsh et al. 2014 Evaniew et al. 2015 Ridgeon et al. 2016 Fragility Index = median 8 (IQR 3-18) Fragility Index = median 2 (IQR 1-3) Fragility Index = median 2 (IQR 1-3.5) Range = 0-808 Range = 0-39 Range = 0-48 FI zero = 10% FI zero = 20% FI zero = 20% FI ≤3 = 25% FI ≤3 = 75% FI ≤3 = 75% FI ≤loss to follow-up = 53% FI ≤loss to follow-up = 65% FI ≤loss to follow-up = 87.5%
  • 50. Fragility Index • Significant results of many RCTs hinge on very few events • Results could potentially be overturned if missing/loss to follow-up data were known
  • 52.
  • 53.
  • 54.
  • 55.
  • 56. Fragility Index • Significant results of many RCTs hinge on very few events • Results could potentially be overturned if missing/loss to follow-up data were known • Reporting of the Fragility Index may help interpretation/over-interpretation • You can calculate it yourself…! http://fragilityindex.com/

Editor's Notes

  1. RCT Gold standard Experiment Random allocation (like tossing a coin) Minimises selection bias - balances known and unknown characteristics Groups only differ by randomly allocated intervention Simple to analyse