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Preimplantation 
Genetic Diagnosis: 
An Overview 
Dr. Laila Bastaki, MD 
Consultant of Medical Genetics 
Director of KMGC
The development of PGD is one of 
the most exciting and important 
milestones in the history of Assisted 
Reproductive Technology
Preimplantation Genetic Diagnosis 
(PGD) 
PGD is a state-of-the-art 
procedure used in 
conjunction with In Vitro 
Fertilization (IVF) 
in which the embryo is 
tested for certain 
conditions prior to being 
placed in the womb of the 
woman. 
PGD was first reported in 
1990. 
PGD combines the recent 
advances in molecular 
genetics and in assisted 
reproductive technology
Indications for PGD 
1. Chromosomal Disorders 
Numerical 
Chromosomal aneuploidy 
Structural 
Inversions 
Translocations 
Deletions and duplications 
2. Gender determination for severe X-linked 
diseases with unknown gene 
3. Severe monogenic diseases (cystic 
fibrosis, ß thalassaemia, sickle cell 
anemia, fragile X syndrome, 
myopathies) 
4. PGD for HLA-typing (to allow selection 
of embryos that are histocompatible 
with live siblings)
HOW IS PREIMPLANTATION 
GENETIC DIAGNOSIS 
PERFORMED? 
Technically 
demanding 
Very Complex 
Requires special 
skills
How is PGD performed? 
Ovarian Stimulation 
IVF 
Blastomere Biopsy on Day 3 
Genetic Analysis 
(FISH or 
Molecular) 
Transfer of 
Unaffected Embryo 
Outcome 
Clinically Normal Baby
The Methods of Preimplantation Genetic 
Diagnosis 
1. Remove a single cell from the 6-8-cell embryo 
using a fine glass needle to puncture the 
zona pellucida and aspirate the cell 
- In skilled hands, this generally does not harm 
the developing embryo. 
- Each cell is called a blastomere.
Blastomere Biopsy Video
The PGD process provides two 
categories of analysis 
Fluorescence In Situ 
Hybridization 
(FISH). 
Gene Chip array 
Polymerase Chain 
Reaction (PCR)
Fluorescence In Situ Hybridization (FISH) 
• Using fluorescent probes specific for each 
chromosome. 
• useful for identifying aneuploidies (incorrect 
chromosome numbers) and translocations 
• procedure destroys the tested cell 
• limited number of chromosomes can be checked 
simultaneously 
• some abnormalities undetectable
Screening aneuploids with multiple probes 
Aneuploidy is the most frequent cause of 
spontaneous abortions
Gene chip array 
(Array CGH Analysis)
What is array-CGH analysis? 
 Array-CGH allows the laboratory to 
determine if the correct number of each 
chromosome is present in the egg or 
embryo 
 This technology simultaneously tests 
for all 24 chromosomes (1-22, X and Y)
What is array-CGH analysis? 
With array-CGH, the amount of DNA 
present for each chromosome is compared to 
that of a normal standard, enabling us to 
detect monosomies (missing chromosomes), 
trisomies (extra chromosomes), and other 
abnormalities
What is array-CGH analysis?
Genetic testing for specific disease loci (PCR) 
Polymerase chain reaction (PCR) 
-The gene causing the disorder should be confirmed and tested in the 
couple 
-Amplification of DNA specific to a gene of interest (family history 
guides choice of genes) 
-Second round PCR used for specific exonic sequencing and/or linkage 
analysis (Fragment analysis)
Fragment analysis for HLA matching
Sequence analysis 
for a specific familial mutation
Examples of genetic disorders detectable via PCR-based 
tests: 
- Tay Sachs (autosomal recessive) 
- Cystic fibrosis (autosomal recessive) 
- Huntington’s disease (autosomal dominant) 
- Thalassemias (autosomal recessive blood disorder) 
- Duchenne muscular dystrophy (X-linked recessive) 
- Spinal muscular atrophy (X-linked recessive) 
As more genetic tests are developed as diagnostic tools, more 
will be used for predictive purposes in PDG.
Limitations of PCR-based tests: 
• Both alleles may not amplify equally (allele dropout), 
leading to misdiagnosis or inconclusive results 
• PCR-based tests only detect disorders at target loci; other 
mutations may exist elsewhere 
• To accommodate these limitations, prenatal 
amniocentesis or chorionic villus sampling is usually 
recommended as a supplement to PGD.
Benefits of PGD 
Reduction in the 
Chance of Having a 
Child with Aneuploidy 
Reduces the 
possibility of pregnancy 
termination following a 
prenatal diagnosis of a 
genetic disorder.
Risks 
Embryo damage 
Oocyte and Embryo Biopsy are invasive 
procedures 
Misdiagnosis The accuracy of the PGD for 
translocation is 90%. 
False negative result 
False positive result 
The chance for NO result 
The chance for mosaicism 
IVF Risks 
Not Achieving Pregnancy 
There may not be any normal embryos 
available for transfer. 
The embryos may not implant and develop 
even if they do not have the defect. 
The workup for PGD is expensive and labor 
intensive 
PGD can only detect a specific genetic disease in an 
embryo. It cannot detect many genetic disorders at 
a time and cannot guarantee that the fetus will not 
have an unrelated birth defect.
Causes of Misdiagnosis 
Human Error 
 Mislabeling, misidentification, misinterpretation 
 Wrong embryo transfer 
 Incorrect probes or primers 
Technical 
 Probe or primer failure 
 Contamination (maternal, paternal, operator, carry-over) 
Intrinsic (embryo) 
 Mosaicism 
 Allele drop out 
 Uniparental Disomy
PGD & Malformations 
European Society of Human Reproduction and 
Embryology (ESHRE) PGD Consortium, 2003 
Major malformations: 2.6% 
Phocomelia and pulmonary deficiency, chylothorax, 
congenital hip dislocation, abdominal cystic mass, pes 
equinivarus, exencephaly 
Minor malformations: 1.4% 
syndactyly, hydrocele testis, ASD, mongolian spot, 
sacral dimple 
Liebaers et al, Belgium 2010 
Major malformations: 2.1% vs ICSI: 3.4% 
chylothorax, VSD, oeasophageal atresia, cataract, 
umbilical hernia, ichthyosis, cardiopathy
Alternatives to PGD 
Conceive naturally 
and have prenatal 
diagnosis during 
pregnancy
Future of PGD 
Efforts continue to be 
focused on improving 
methods to obtain an 
accurate diagnosis. 
PGD holds great 
promise for the future 
as techniques and 
genetic tests are 
perfected. 
PGD may become 
routine in the next few 
years.
Conclusions 
For couples at risk for 
producing offspring 
with either 
debilitating 
monogenic disorders 
or chromosomal 
abnormalities 
IVF/PGD represents a 
major scientific 
advance
Conclusions 
Complications, both before and after birth, 
are no different in type or number from those 
found in a comparable ICSI population 
Other parameters such as birth weight and 
length, are also similar to an ICSI population 
PGD appears to be a safe method to avoid 
the birth of children with genetic defects
Conclusions 
• Before PGD is performed, genetic counseling 
must be provided to ensure that patients 
fully understand the 
risk for having an affected child 
the impact of the disease 
the available options 
the multiple technical limitations 
including the possibility of an erroneous 
result 
• Prenatal diagnostic testing is strongly 
encouraged to confirm the results of PGD
Thank You

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Pgd an overview_dr.laila_bastaki

  • 1. Preimplantation Genetic Diagnosis: An Overview Dr. Laila Bastaki, MD Consultant of Medical Genetics Director of KMGC
  • 2. The development of PGD is one of the most exciting and important milestones in the history of Assisted Reproductive Technology
  • 3. Preimplantation Genetic Diagnosis (PGD) PGD is a state-of-the-art procedure used in conjunction with In Vitro Fertilization (IVF) in which the embryo is tested for certain conditions prior to being placed in the womb of the woman. PGD was first reported in 1990. PGD combines the recent advances in molecular genetics and in assisted reproductive technology
  • 4. Indications for PGD 1. Chromosomal Disorders Numerical Chromosomal aneuploidy Structural Inversions Translocations Deletions and duplications 2. Gender determination for severe X-linked diseases with unknown gene 3. Severe monogenic diseases (cystic fibrosis, ß thalassaemia, sickle cell anemia, fragile X syndrome, myopathies) 4. PGD for HLA-typing (to allow selection of embryos that are histocompatible with live siblings)
  • 5. HOW IS PREIMPLANTATION GENETIC DIAGNOSIS PERFORMED? Technically demanding Very Complex Requires special skills
  • 6. How is PGD performed? Ovarian Stimulation IVF Blastomere Biopsy on Day 3 Genetic Analysis (FISH or Molecular) Transfer of Unaffected Embryo Outcome Clinically Normal Baby
  • 7. The Methods of Preimplantation Genetic Diagnosis 1. Remove a single cell from the 6-8-cell embryo using a fine glass needle to puncture the zona pellucida and aspirate the cell - In skilled hands, this generally does not harm the developing embryo. - Each cell is called a blastomere.
  • 9. The PGD process provides two categories of analysis Fluorescence In Situ Hybridization (FISH). Gene Chip array Polymerase Chain Reaction (PCR)
  • 10. Fluorescence In Situ Hybridization (FISH) • Using fluorescent probes specific for each chromosome. • useful for identifying aneuploidies (incorrect chromosome numbers) and translocations • procedure destroys the tested cell • limited number of chromosomes can be checked simultaneously • some abnormalities undetectable
  • 11. Screening aneuploids with multiple probes Aneuploidy is the most frequent cause of spontaneous abortions
  • 12. Gene chip array (Array CGH Analysis)
  • 13. What is array-CGH analysis?  Array-CGH allows the laboratory to determine if the correct number of each chromosome is present in the egg or embryo  This technology simultaneously tests for all 24 chromosomes (1-22, X and Y)
  • 14. What is array-CGH analysis? With array-CGH, the amount of DNA present for each chromosome is compared to that of a normal standard, enabling us to detect monosomies (missing chromosomes), trisomies (extra chromosomes), and other abnormalities
  • 15. What is array-CGH analysis?
  • 16. Genetic testing for specific disease loci (PCR) Polymerase chain reaction (PCR) -The gene causing the disorder should be confirmed and tested in the couple -Amplification of DNA specific to a gene of interest (family history guides choice of genes) -Second round PCR used for specific exonic sequencing and/or linkage analysis (Fragment analysis)
  • 17. Fragment analysis for HLA matching
  • 18. Sequence analysis for a specific familial mutation
  • 19. Examples of genetic disorders detectable via PCR-based tests: - Tay Sachs (autosomal recessive) - Cystic fibrosis (autosomal recessive) - Huntington’s disease (autosomal dominant) - Thalassemias (autosomal recessive blood disorder) - Duchenne muscular dystrophy (X-linked recessive) - Spinal muscular atrophy (X-linked recessive) As more genetic tests are developed as diagnostic tools, more will be used for predictive purposes in PDG.
  • 20. Limitations of PCR-based tests: • Both alleles may not amplify equally (allele dropout), leading to misdiagnosis or inconclusive results • PCR-based tests only detect disorders at target loci; other mutations may exist elsewhere • To accommodate these limitations, prenatal amniocentesis or chorionic villus sampling is usually recommended as a supplement to PGD.
  • 21. Benefits of PGD Reduction in the Chance of Having a Child with Aneuploidy Reduces the possibility of pregnancy termination following a prenatal diagnosis of a genetic disorder.
  • 22. Risks Embryo damage Oocyte and Embryo Biopsy are invasive procedures Misdiagnosis The accuracy of the PGD for translocation is 90%. False negative result False positive result The chance for NO result The chance for mosaicism IVF Risks Not Achieving Pregnancy There may not be any normal embryos available for transfer. The embryos may not implant and develop even if they do not have the defect. The workup for PGD is expensive and labor intensive PGD can only detect a specific genetic disease in an embryo. It cannot detect many genetic disorders at a time and cannot guarantee that the fetus will not have an unrelated birth defect.
  • 23. Causes of Misdiagnosis Human Error  Mislabeling, misidentification, misinterpretation  Wrong embryo transfer  Incorrect probes or primers Technical  Probe or primer failure  Contamination (maternal, paternal, operator, carry-over) Intrinsic (embryo)  Mosaicism  Allele drop out  Uniparental Disomy
  • 24. PGD & Malformations European Society of Human Reproduction and Embryology (ESHRE) PGD Consortium, 2003 Major malformations: 2.6% Phocomelia and pulmonary deficiency, chylothorax, congenital hip dislocation, abdominal cystic mass, pes equinivarus, exencephaly Minor malformations: 1.4% syndactyly, hydrocele testis, ASD, mongolian spot, sacral dimple Liebaers et al, Belgium 2010 Major malformations: 2.1% vs ICSI: 3.4% chylothorax, VSD, oeasophageal atresia, cataract, umbilical hernia, ichthyosis, cardiopathy
  • 25. Alternatives to PGD Conceive naturally and have prenatal diagnosis during pregnancy
  • 26. Future of PGD Efforts continue to be focused on improving methods to obtain an accurate diagnosis. PGD holds great promise for the future as techniques and genetic tests are perfected. PGD may become routine in the next few years.
  • 27. Conclusions For couples at risk for producing offspring with either debilitating monogenic disorders or chromosomal abnormalities IVF/PGD represents a major scientific advance
  • 28. Conclusions Complications, both before and after birth, are no different in type or number from those found in a comparable ICSI population Other parameters such as birth weight and length, are also similar to an ICSI population PGD appears to be a safe method to avoid the birth of children with genetic defects
  • 29. Conclusions • Before PGD is performed, genetic counseling must be provided to ensure that patients fully understand the risk for having an affected child the impact of the disease the available options the multiple technical limitations including the possibility of an erroneous result • Prenatal diagnostic testing is strongly encouraged to confirm the results of PGD