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High Pressure Refolding of Protein
 Aggregates: Applications for Reduced
Immunogenicity and Protein Production

                        Matthew Seefeldt Ph.D.
                                 PepTalk 2010
www.barofold.com
PreEMT™ Technology
                         An “Elegant Method”
•   High hydrostatic pressure (500-4000 bar) disaggregates and properly
    refolds proteins at conditions that maintain native protein structure
•   Enables proprietary products with enhanced activity and safety
•   Operated at scale in GMP environment
•   Broadly applicable




                                      2
Potential Manufacturing Process Flows using PreEMT
                      Technology
Bacterial Expression             Mammalian Expression
        Centrifugation                 Conditioned Medium



             Cell                     Column Chromatography
     Lysis/Homogenization                  Capture Step



        Centrifugation                   Viral Inactivation
                            PreEMT
      PreEMT Refolding                Column Chromatography
    from Inclusion Bodies                 (1-2 Columns)



    Column Chromatography
                                          Viral Filtration
        (1-2 Columns)



         UF/DF BDS                          UF/DF BDS




         Fill/finish DP                    Fill/finish DP
Acknowledgements




              Amber Haynes Fradkin
                John F. Carpenter
                Ted W. Randolph
University of Colorado Center for Pharmaceutical
                   Biotechnology

                     4
Aggregates and Biologic
               Immunogenicity
•   Previous studies demonstrates that aggregates in
    biologics can lead to immunogenicity against native
    self-proteins and the native therapeutic
    – h Growth Hormone (Moore et al., 1980)
    – rh Insulin (Ratner et. al., 1990)
    – rh IFN-beta-1b (Runkel et. al., 1998)
    – rh EPO (Gershon and Casadevall et al., 2002)




                           5
Possible Basis for Aggregate-
               Induced Immunogenicity
     •   Patterned Presentation of Microbial Structures




     •   Hapten Hypothesis (Dintzen et al.)
         – >100kDa
         – Valency >10
         – 5-10nm spacing


(Rosenberg, FDA 2006)          6
Hypothesis

•   High pressure treatment can decrease the
    presence of aggregates in final formulations,
    decreasing the immunogenicity of the final
    product.
•   Experiment
    –   Recombinant murine growth hormone (rmGH)(ECP,
        LPS Free)
         •   >99% Monomeric (SEC-HPLC)
         •   Aggregated via Agitation, Freeze-Thaw
         •   High Pressure Refolded (2000 bar/4hr.)
    –   2ug dose X 5 days/week X 3 weeks
                                7
High Pressure Refolding of mGH
          Aggregates

                             Insoluble aggregate   Error
               Monomer (%)
                                     (%)           (%)*
 Monomer          100                  0           ±1.8
 HP Monomer       100                  0           ±1.7
 Agitated          46                 54           ±1.5
 HP Agitated      100                  0           ±1.5
 FT                76                 24           ±1.2
 HP FT            100                  0           ±1.3
 UV                90                 10           ±1.3
 Glass              0                100           ±0.5
 Alhydrogel         0                100           ±0.3




                         8
Particle Content by
                                                     MicroFlow Imaging
                        109
                               Monomer
                        108                                               High Pressure Treated
  Number/ml/bin (m-4)




                        107
                        106                                               Initial
                        105
                        104
                        103
                        102                                                                     Freeze-Thaw Agg.
                        101
                                                                                                109
                        100
                              10       20       30       40     50                              108




                                                                          Number/ml/bin (m-4)
                              Mean particle diameter (micron)                                   107
                                                                                                106
                                                                                                105
                              Agitated Agg.                                                     104
                109
                                                                                                103
                108
                                                                                                102
Number/ml/bin (m-4)




                107
                                                                                                101
                106
                                                                                                100
                105                                                                                   10      20        30        40    50
                104                                                                                   Mean particle diameter (micron)
                103
                102
                101
                100
                              10       20        30        40    50
                              Mean particle diameter (micron)

                                                                      9
Reduced Immunogenicity
    Monomer




              10
Conclusions - mGH
•   High pressure treatment decreases aggregate
    content
    – SEC-HPLC (Yields ~100%)
    – Decreases particle sizes
        •   Monomer - <10 m
        •   Agitated Agg. - <20 m
        •   Freeze-Thaw Agg. - <30 m
•   Immunogenicity was eliminated in High Pressure
    Monomer sample
•   No correlation with immunogenicity and particle
    size in other samples
                             11
Murine IFN-beta
                                                          2.3 g/day IP for 15 days
             >99% monomer by SEC                          Sera collected on day 21
             INF-


                                                              >99% monomer by SEC
                                                              after high pressure
                                                              treatment (PreEMT™)
                                                              of insoluble aggregates.
                        Aggregated by vortexing for
                        5 min. 53% insoluble and 7% soluble
                        aggregates. 40% monomer by SEC




Seefeldt et al., 2009                       12
Applications to Human
                    Therapeutics
•   IFN-beta
    – BetaseronTM contains ~40% agg. (Runkel et al.,1998)
    – BaroFold implemented PreEMTTM to produce an
      >99% aggregate-free, HSA-free, intereferon-beta-1b.


•   rhGH
    –   PreEMTTM Refolding studies were conducted on two
        commercial rhGHs.



                           13
Reduced Immunogenicity
                               of BaroFeronTM




Zeng, D, Recovery of Biomolecules XIII Meeting   14
Reduced Immunogenicity of
               Commercial rhGH in Naïve Mice




                      Group average anti-hGH IgG concentrations
                      determined from 4th week bleeds (peak antibody
                      production) for naive adult animal model. Error bars
                      shown are standard error.

Fradkin et al. 2008                      15
PreEMT™ Technology
          Easily scalable using existing technology




                        GMP PreEMT 10 L            NC Hyperbaric
BaroFold PreEMT+
                          (3’ x 4’ x 4.5’)        Wave 6000 / 135


                   Research to Production Scale

                                    16
Advantages of PreEMT Technology
           Protein Therapeutics
•   Improved product safety profiles
     – Reduced soluble aggregates
     – Lowered immunogenicity risks (breaking tolerance)
•   Enabling
•   Lower cost of goods
     – Higher yields
     – Faster refolding reduces floor time
     – Can replace dilution tanks; reduced scale


•   We are seeking collaborations to apply PreEMT
    technology on your proteins.

                           17
Thank You
www.barofold.com
mseefeldt@barofold.com

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Baro Fold Pep Talk 2010

  • 1. High Pressure Refolding of Protein Aggregates: Applications for Reduced Immunogenicity and Protein Production Matthew Seefeldt Ph.D. PepTalk 2010 www.barofold.com
  • 2. PreEMT™ Technology An “Elegant Method” • High hydrostatic pressure (500-4000 bar) disaggregates and properly refolds proteins at conditions that maintain native protein structure • Enables proprietary products with enhanced activity and safety • Operated at scale in GMP environment • Broadly applicable 2
  • 3. Potential Manufacturing Process Flows using PreEMT Technology Bacterial Expression Mammalian Expression Centrifugation Conditioned Medium Cell Column Chromatography Lysis/Homogenization Capture Step Centrifugation Viral Inactivation PreEMT PreEMT Refolding Column Chromatography from Inclusion Bodies (1-2 Columns) Column Chromatography Viral Filtration (1-2 Columns) UF/DF BDS UF/DF BDS Fill/finish DP Fill/finish DP
  • 4. Acknowledgements Amber Haynes Fradkin John F. Carpenter Ted W. Randolph University of Colorado Center for Pharmaceutical Biotechnology 4
  • 5. Aggregates and Biologic Immunogenicity • Previous studies demonstrates that aggregates in biologics can lead to immunogenicity against native self-proteins and the native therapeutic – h Growth Hormone (Moore et al., 1980) – rh Insulin (Ratner et. al., 1990) – rh IFN-beta-1b (Runkel et. al., 1998) – rh EPO (Gershon and Casadevall et al., 2002) 5
  • 6. Possible Basis for Aggregate- Induced Immunogenicity • Patterned Presentation of Microbial Structures • Hapten Hypothesis (Dintzen et al.) – >100kDa – Valency >10 – 5-10nm spacing (Rosenberg, FDA 2006) 6
  • 7. Hypothesis • High pressure treatment can decrease the presence of aggregates in final formulations, decreasing the immunogenicity of the final product. • Experiment – Recombinant murine growth hormone (rmGH)(ECP, LPS Free) • >99% Monomeric (SEC-HPLC) • Aggregated via Agitation, Freeze-Thaw • High Pressure Refolded (2000 bar/4hr.) – 2ug dose X 5 days/week X 3 weeks 7
  • 8. High Pressure Refolding of mGH Aggregates Insoluble aggregate Error Monomer (%) (%) (%)* Monomer 100 0 ±1.8 HP Monomer 100 0 ±1.7 Agitated 46 54 ±1.5 HP Agitated 100 0 ±1.5 FT 76 24 ±1.2 HP FT 100 0 ±1.3 UV 90 10 ±1.3 Glass 0 100 ±0.5 Alhydrogel 0 100 ±0.3 8
  • 9. Particle Content by MicroFlow Imaging 109 Monomer 108 High Pressure Treated Number/ml/bin (m-4) 107 106 Initial 105 104 103 102 Freeze-Thaw Agg. 101 109 100 10 20 30 40 50 108 Number/ml/bin (m-4) Mean particle diameter (micron) 107 106 105 Agitated Agg. 104 109 103 108 102 Number/ml/bin (m-4) 107 101 106 100 105 10 20 30 40 50 104 Mean particle diameter (micron) 103 102 101 100 10 20 30 40 50 Mean particle diameter (micron) 9
  • 11. Conclusions - mGH • High pressure treatment decreases aggregate content – SEC-HPLC (Yields ~100%) – Decreases particle sizes • Monomer - <10 m • Agitated Agg. - <20 m • Freeze-Thaw Agg. - <30 m • Immunogenicity was eliminated in High Pressure Monomer sample • No correlation with immunogenicity and particle size in other samples 11
  • 12. Murine IFN-beta 2.3 g/day IP for 15 days >99% monomer by SEC Sera collected on day 21 INF- >99% monomer by SEC after high pressure treatment (PreEMT™) of insoluble aggregates. Aggregated by vortexing for 5 min. 53% insoluble and 7% soluble aggregates. 40% monomer by SEC Seefeldt et al., 2009 12
  • 13. Applications to Human Therapeutics • IFN-beta – BetaseronTM contains ~40% agg. (Runkel et al.,1998) – BaroFold implemented PreEMTTM to produce an >99% aggregate-free, HSA-free, intereferon-beta-1b. • rhGH – PreEMTTM Refolding studies were conducted on two commercial rhGHs. 13
  • 14. Reduced Immunogenicity of BaroFeronTM Zeng, D, Recovery of Biomolecules XIII Meeting 14
  • 15. Reduced Immunogenicity of Commercial rhGH in Naïve Mice Group average anti-hGH IgG concentrations determined from 4th week bleeds (peak antibody production) for naive adult animal model. Error bars shown are standard error. Fradkin et al. 2008 15
  • 16. PreEMT™ Technology Easily scalable using existing technology GMP PreEMT 10 L NC Hyperbaric BaroFold PreEMT+ (3’ x 4’ x 4.5’) Wave 6000 / 135 Research to Production Scale 16
  • 17. Advantages of PreEMT Technology Protein Therapeutics • Improved product safety profiles – Reduced soluble aggregates – Lowered immunogenicity risks (breaking tolerance) • Enabling • Lower cost of goods – Higher yields – Faster refolding reduces floor time – Can replace dilution tanks; reduced scale • We are seeking collaborations to apply PreEMT technology on your proteins. 17