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BIOLOGICAL SYSTEMS ART:
ARTISTIC RESEARCH INTO THE ALGORITHMS OF LIVING SYSTEMS
                       Allison Kudla
Section 1:
Material and Meaning
Systems Art and Land Art
Phenomenology
The Paradigm of the Screen
Emulation




                             Section 2:
                             Biological Systems Art
                             Behavioral Aesthetics :
                             The Poetry of Biological Systems
                             The Search for Luminosity
                             The Society for Plant Neurobiology
                             Encoding Information into Organisms
                             Capacity for (urban eden, human error)
                             Modulation and Cell Differentiation




                                                                      Section 3:
                                                                      Tending to Wild
                                                                      Growth Pattern
                                                                      Botanical Abstractions
                                                                      Sampling Nature into Homogenous Units
                                                                      Generative and Processual Art in a Biological Context
“Watercolour was the ideal medium for the
                             spontaneous recording of transient atmospheric
                              effects, given the speed with which it could be
                                   applied and its inherent luminosity.”




 Lyles and Wilton referring to the stormy landscapes of J.M.W Turner and Thomas Girtin from the end of the Enlightenment Era, circa the end of the eighteenth
century.                                                                                                                                                        Section One
John Linnell, Primrose Hill, 1811. Pen, brown ink and brown wash with white highlights on paper. The Fitzwilliam Museu   Section One
Jean Tingeuely              Robert Smithson       Otto Piene                   Doc Edgerton
Homage to New York (1960)   Spiral Jetty (1970)   Milwaukee Anemenome (1978)   Milkdrop Coronet (1957)   Section One
Sommerer and Migonneua. Interactive Plant Growing. (1993).   Section One
Brixey, Shawn and James Coupe. "Simulation to Emulation, Pioneering Telematic Art Forms of the 21st Century."   Section One
“The paradigm shift that
                                     emulation art suggests is the
                                     inevitable result of hybrid art
                                             research praxis at the
                                           intersection of scientific
                                        discovery, informatics and
                                         aesthetics, as we seek to
                                       understand the universe as
                                     an operating system in which
                                        we perpetually engage on
                                          both a microcosmic and
                                               macrocosmic level.”



Brixey, Shawn and James Coupe. "Simulation to Emulation, Pioneering Telematic Art Forms of the 21st Century."   Section One
How can I emphasize a
biological paradigm
within an emulative arts
practice?

What are the behavioral
aesthetics and poetries
embedded in biological
systems?
Section Two
Biological systems art is running along a parallel track to algorithmic, computational and
simulative art, but instead of expressing the modulation and output of algorithms with digital
computers, the output is emulative because it is expressed with genes, cells, and organisms.




                                                                                             Section Two
Biological systems art is running along a parallel track to algorithmic, computational and
simulative art, but instead of expressing the modulation and output of algorithms with digital
computers, the output is emulative because it is expressed with genes, cells, and organisms.


The cycles present in these works are not dependent on CPU clocking speeds or frame rates
but on the actual biophysically constrained time it takes for biological systems to evolve, grow, die,
etc.




                                                                                              Section Two
Biological systems art is running along a parallel track to algorithmic, computational and
simulative art, but instead of expressing the modulation and output of algorithms with digital
computers, the output is emulative because it is expressed with genes, cells, and organisms.


The cycles present in these works are not dependent on CPU clocking speeds or frame rates
but on the actual biophysically constrained time it takes for biological systems to evolve, grow, die,
etc.

Embedded within biological systems are the poetry and dialogue of the predictable versus
the emergent.




                                                                                              Section Two
Biological systems art is running along a parallel track to algorithmic, computational and
simulative art, but instead of expressing the modulation and output of algorithms with digital
computers, the output is emulative because it is expressed with genes, cells, and organisms.


The cycles present in these works are not dependent on CPU clocking speeds or frame rates
but on the actual biophysically constrained time it takes for biological systems to evolve, grow, die,
etc.

Embedded within biological systems are the poetry and dialogue of the predictable versus
the emergent.


Within biological systems, there is always repetition, which is perhaps why it becomes so
attractive to consider biological systems as machines or as being like clockwork. However,
precisely what makes biological organisms fascinating is their variability and the at times
unpredictable or seemingly random way this variability can be expressed inside of a prescribed
and recursive system.




                                                                                              Section Two
Differentiatio         Genetics                Communication
                       Inheritance              Signaling and Response
n                      Evolution                Permissions
 Morphology            Phenotypic Expression    Decision-making
 Germination           Adaptation               Sentience and Intelligence
 Growth
 Expression

                                               Symbiotic and
Circulation            Reproductive
                                               Parasitic Relationships
 Nutrient Transport    Processes                Co-evolution
 Oxygenation           Fertilization


                                         The Process of Death
Circadian              Catabolic Processes Senescence
Rhythms                Respiration              Decomposition/Decay
 Waking and Sleeping   Consumption              Disease
                                                Entropy


                                                                             Section Two
Seek. Negroponte/The Architecture Machine Group. (1969-70).   Chickens Hatching. Haacke. (1969).   Section Two
Leroi, Armand Marie. Mutants.   Section Two
In a way, the embryo is just a microcosm of
                                the cognitive world that we inhabit, the
                                world of signals that insistently urge us to
                                travel to one destination rather than
                                another, eschew some goals in favor of
                                others, hold some things to be true and
                                others false; in short, that moulds us into
                                what we are.




Leroi, Armand Marie. Mutants.                                                  Section Two
The plant’s dramatic gesture of             I am opening a door to an
 waking and sleeping becomes the             imagined or potentially future
                                             state that has yet to occur
 signaling observed by the                   and creating situations or
 technology that mediates the                frames for us, the audience,
 message to the acting sun in the            to observe how the organic
 plant’s universe.                           algorithms embedding in
                                             living systems will adapt to
                                             these complex and imagined
                                             scenarios.




 By equipping an organism with the ability
 to make its own discoveries about itself
 and its environment, I am generating a
 feedback loop that is centered on the
 organically algorithmic qualities of a
 living system.

The Search For Luminosity (2005-7)                                            Section Two
“To say a plant has a “behavior” or that it can “store
           chemical information” would not cause
           objection, but once a word like cognition is applied,
           values become charged and people want to stand up
           against the use of this term to apply to a plant.” This
           same debate exists in machine learning or what is
           also called artificial intelligence. Can a computational
           or mechanical system have intelligence? In some
           ways, this becomes its own epistemological rupture as
           it seems to level hierarchies of higher and lower
           organisms and between living and nonliving systems.




Quotation comes from an interview with Dr. Elizabeth Van Volkenburgh   Section Two
“To live, to err, to
                                                                             fall, to triumph, to
                                                                             recreate life out of
                                                                             life.”




Craig J. Venter’s Synthetic Cells watermarked wtih James Joyce’s quotation                          Section Two
“To live, to err, to
                                                                             fall, to triumph, to
                                                                             recreate life out of
                                                                             life.”




          What does
          that bacteria
          know of
          those words?




Craig J. Venter’s Synthetic Cells watermarked wtih James Joyce’s quotation                          Section Two
Genesis. Kac. (1999).




Entanglement. Pampin, Kollin, Kang. (2008).   OneTrees. Jeremijenko. (2000).   Section Two
Capacity for (urban eden, human error). 2011. As shown at Gallery Kapelicain Ljubljana, Slovenia.   Section Two
Capacity for (urban eden, human error). 2011. As shown at Gallery Kapelicain Ljubljana, Slovenia.   Section Two
Why choose plants as the material
and meaning for these works of art?

What fundamental connections can
be explored between carrier/
modulator and genetics/epigenetics
and differentiation?

Could a time-based, algorithmic and
even digital work of visual art be
made without a human or computer
as its primary actors?
GROWTH
PATTERN
The premise for this work is
the merging of a living
botanical system with the
cultural legacy of botanical
motifs. By attempting to
structure a living organism
inside an abstraction of itself,
a poetic fractal of
consciousness, control, and
plasticity unfolds in time. The
essence or idealized structure
of a living system collides with
its material existence.




                                   Section Three
Section Three
Plant cells are totipotent. This means that, depending on the
ratio of auxins to cytokinins, the cells have the capacity to
differentiate into any organ in the plant. Through chemical
intervention, functional forumlas embedded in plant cells
allow for this quality to be manipulated:

cytokinins > auxins = leaves
cytokinins < auxins = roots
cytokinins = auxins = undifferentiated tissue




                                                                Section Three
cytokinins > auxins =
leaves




                        Section Three
Time-lapse documentation of leaf cuttings sprouting leaves in-vitro.   Section Three
Time-lapse documentation of leaf cuttings sprouting leaves in-vitro.   Section Three
Section Three
REVERSE ENTROPY?




                   Section Three
Section Three
The installation begins
harmoniously, yet the
structure is modulated,
and disrupted by the
varying behaviors,
growths, and
senescence processes
occurring in each unit.
The algorithms running
on the cells themselves,
as they strive to
reorganize themselves,
can be seen alongside
the algorithms of
contamination as
parasites grow quickly,
covering the plant tissue
and taking the plant’s
nutrients. The structure
for the work can no
longer be defined with
any precision.

                 Section Three
Section Three
Due to the repetition of the pattern, the occupants to the space
witness a performative experiment of morphological and
ecological changes in each micro-environment over the duration
of the exhibit.




                                                                   Section Three
Leaf tissue is too
Balance in sterility is achieved,          Tissue is not sterilized                     sterilized and their
micro-organisms                            enough and hidden fungi and                  cells turn brown and
contaminating the leaf are not             bacteria emerge, growing                     die.
present and leaf tissue                    over the healthy leaf tissue.
remains alive and growing.                                                              It takes about a week before
                                           Fungi and Bacteria appear in a matter of     cells show they are no longer
                                           days and weeks and inhibit survival of the   living.
Can live for months if there is enough
                                           leaf tissue.
growth medium and can be transplanted as
well.

                                                                                                                    Section Three
Left: Leaves after being cut with bilaterally symmetrical dies. Right: Die sets.   Section Three
The process of abstraction widens the granularity of a system, thing, or set of things so that what remains
is the unifying and similar essence of the thing being abstracted.




Left: Tobacco plant in aerial view. Right: Analogous abstraction composed of 4 petri dishes rotating around a central axis.   Section Three
Section Three
Growth Pattern was presented
                                                                                            in Hasselt, Belgium, from 21
                                                                                             November 2010 - 13 March
                                                                                        2011 at the Z33. The show was
                                                                                        titled Alter Nature: We Can and
                                                                                                   was curated by Karen
                                                                                            Verschooren. The exhibition
                                                                                                  showed the work of 20
                                                                                          international artists who were
                                                                                             manipulating, designing, or
                                                                                       displacing nature and biological
                                                                                       systems. For my presentation of
                                                                                        Growth Pattern, I worked at the
                                                                                               University of Hasselt, with
                                                                                               biologist Greet Clerx. The
                                                                                        process of creation or score for
                                                                                         the work was demonstrated in
                                                                                             November of 2010 to Greet
                                                                                               Clerx. When the work was
                                                                                        reproduced in January of 2011,
                                                                                                       I was not present.



Greet Clerx at the University of Hasselt’s greenhouse with the tobacco plants, 2010.                              Section Three
Entropy is the final result,
confronting the audience
with the very living nature
of the work, suggesting
that attempting to control
a living system in the way
one can control the pixels
in a computer animation
is not only difficult but
also defeating the poetry
embedded in living
systems and the complex
interactions that occur in
their co-existing micro-
environments.




                              Final state of decay as presented at LABoral, Gijon, Spain.   Section Three
Still from Time-lapse documentation. Beginning and End.   Section Three
Section Three
Detail of symmetrical leaf growths.   Section Three
Detail of symmetrical fungal growths.   Section Three
Blossfeldt stands out as having begun, in a
                                                           methodical way, the process of finding
                                                           idealized and stylized forms within the natural
                                                           world and taking photographs of them. His
                                                           photographs transcend documentation of a
                                                           once living artifact to appear timeless and
                                                           otherworldly.




Karl Blossfeldt, Forsythia suspensa, 1929. Photogravure.                                                 Section Three
“The drawings of patients with Parkinsonism, as they are “awakened” by L-Dopa, form
         an instructive analogy. Asked to draw a tree, the Parkinsonian tends to draw a small,
         meager thing, stunted, impoverished, a bare winter-tree with no foliage at all. As he
         “warms up”, “comes to”, is animated by L-Dopa, so the tree acquires vigor, life,
         imagination—and foliage. If he becomes too excited, high, on L-Dopa, the tree may
         acquire a fantastic ornateness and exuberance, exploding with a florescence of new
         branches and foliage with little arabesques, curlicues, and what-not, until finally its
         original form is completely lost beneath this enormous, this baroque, elaboration.”




Oliver Sacks, The Man Who Mistook His Wife For A Hat                                              Section Three
In my artistic practice, I call for a serious re-evaluation of
many of the approaches to dealing with encoding
information into living systems. I place strong value on the
centuries of embedded biological software, agency,
resilience, and evolutionary data that is already residing in
every living system. The code guiding the organism is the
mystery to be unravelled, the plasticity to be explored, the
structure to marvel at and imagine futures from, and the
behavior to value, emphasize and render aesthetic.




                                                                 Section Three

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Ank

  • 1.
  • 2.
  • 3. BIOLOGICAL SYSTEMS ART: ARTISTIC RESEARCH INTO THE ALGORITHMS OF LIVING SYSTEMS Allison Kudla
  • 4. Section 1: Material and Meaning Systems Art and Land Art Phenomenology The Paradigm of the Screen Emulation Section 2: Biological Systems Art Behavioral Aesthetics : The Poetry of Biological Systems The Search for Luminosity The Society for Plant Neurobiology Encoding Information into Organisms Capacity for (urban eden, human error) Modulation and Cell Differentiation Section 3: Tending to Wild Growth Pattern Botanical Abstractions Sampling Nature into Homogenous Units Generative and Processual Art in a Biological Context
  • 5.
  • 6.
  • 7.
  • 8. “Watercolour was the ideal medium for the spontaneous recording of transient atmospheric effects, given the speed with which it could be applied and its inherent luminosity.” Lyles and Wilton referring to the stormy landscapes of J.M.W Turner and Thomas Girtin from the end of the Enlightenment Era, circa the end of the eighteenth century. Section One
  • 9. John Linnell, Primrose Hill, 1811. Pen, brown ink and brown wash with white highlights on paper. The Fitzwilliam Museu Section One
  • 10. Jean Tingeuely Robert Smithson Otto Piene Doc Edgerton Homage to New York (1960) Spiral Jetty (1970) Milwaukee Anemenome (1978) Milkdrop Coronet (1957) Section One
  • 11. Sommerer and Migonneua. Interactive Plant Growing. (1993). Section One
  • 12. Brixey, Shawn and James Coupe. "Simulation to Emulation, Pioneering Telematic Art Forms of the 21st Century." Section One
  • 13. “The paradigm shift that emulation art suggests is the inevitable result of hybrid art research praxis at the intersection of scientific discovery, informatics and aesthetics, as we seek to understand the universe as an operating system in which we perpetually engage on both a microcosmic and macrocosmic level.” Brixey, Shawn and James Coupe. "Simulation to Emulation, Pioneering Telematic Art Forms of the 21st Century." Section One
  • 14.
  • 15.
  • 16. How can I emphasize a biological paradigm within an emulative arts practice? What are the behavioral aesthetics and poetries embedded in biological systems?
  • 18. Biological systems art is running along a parallel track to algorithmic, computational and simulative art, but instead of expressing the modulation and output of algorithms with digital computers, the output is emulative because it is expressed with genes, cells, and organisms. Section Two
  • 19. Biological systems art is running along a parallel track to algorithmic, computational and simulative art, but instead of expressing the modulation and output of algorithms with digital computers, the output is emulative because it is expressed with genes, cells, and organisms. The cycles present in these works are not dependent on CPU clocking speeds or frame rates but on the actual biophysically constrained time it takes for biological systems to evolve, grow, die, etc. Section Two
  • 20. Biological systems art is running along a parallel track to algorithmic, computational and simulative art, but instead of expressing the modulation and output of algorithms with digital computers, the output is emulative because it is expressed with genes, cells, and organisms. The cycles present in these works are not dependent on CPU clocking speeds or frame rates but on the actual biophysically constrained time it takes for biological systems to evolve, grow, die, etc. Embedded within biological systems are the poetry and dialogue of the predictable versus the emergent. Section Two
  • 21. Biological systems art is running along a parallel track to algorithmic, computational and simulative art, but instead of expressing the modulation and output of algorithms with digital computers, the output is emulative because it is expressed with genes, cells, and organisms. The cycles present in these works are not dependent on CPU clocking speeds or frame rates but on the actual biophysically constrained time it takes for biological systems to evolve, grow, die, etc. Embedded within biological systems are the poetry and dialogue of the predictable versus the emergent. Within biological systems, there is always repetition, which is perhaps why it becomes so attractive to consider biological systems as machines or as being like clockwork. However, precisely what makes biological organisms fascinating is their variability and the at times unpredictable or seemingly random way this variability can be expressed inside of a prescribed and recursive system. Section Two
  • 22. Differentiatio Genetics Communication Inheritance Signaling and Response n Evolution Permissions Morphology Phenotypic Expression Decision-making Germination Adaptation Sentience and Intelligence Growth Expression Symbiotic and Circulation Reproductive Parasitic Relationships Nutrient Transport Processes Co-evolution Oxygenation Fertilization The Process of Death Circadian Catabolic Processes Senescence Rhythms Respiration Decomposition/Decay Waking and Sleeping Consumption Disease Entropy Section Two
  • 23. Seek. Negroponte/The Architecture Machine Group. (1969-70). Chickens Hatching. Haacke. (1969). Section Two
  • 24. Leroi, Armand Marie. Mutants. Section Two
  • 25. In a way, the embryo is just a microcosm of the cognitive world that we inhabit, the world of signals that insistently urge us to travel to one destination rather than another, eschew some goals in favor of others, hold some things to be true and others false; in short, that moulds us into what we are. Leroi, Armand Marie. Mutants. Section Two
  • 26. The plant’s dramatic gesture of I am opening a door to an waking and sleeping becomes the imagined or potentially future state that has yet to occur signaling observed by the and creating situations or technology that mediates the frames for us, the audience, message to the acting sun in the to observe how the organic plant’s universe. algorithms embedding in living systems will adapt to these complex and imagined scenarios. By equipping an organism with the ability to make its own discoveries about itself and its environment, I am generating a feedback loop that is centered on the organically algorithmic qualities of a living system. The Search For Luminosity (2005-7) Section Two
  • 27. “To say a plant has a “behavior” or that it can “store chemical information” would not cause objection, but once a word like cognition is applied, values become charged and people want to stand up against the use of this term to apply to a plant.” This same debate exists in machine learning or what is also called artificial intelligence. Can a computational or mechanical system have intelligence? In some ways, this becomes its own epistemological rupture as it seems to level hierarchies of higher and lower organisms and between living and nonliving systems. Quotation comes from an interview with Dr. Elizabeth Van Volkenburgh Section Two
  • 28. “To live, to err, to fall, to triumph, to recreate life out of life.” Craig J. Venter’s Synthetic Cells watermarked wtih James Joyce’s quotation Section Two
  • 29. “To live, to err, to fall, to triumph, to recreate life out of life.” What does that bacteria know of those words? Craig J. Venter’s Synthetic Cells watermarked wtih James Joyce’s quotation Section Two
  • 30. Genesis. Kac. (1999). Entanglement. Pampin, Kollin, Kang. (2008). OneTrees. Jeremijenko. (2000). Section Two
  • 31. Capacity for (urban eden, human error). 2011. As shown at Gallery Kapelicain Ljubljana, Slovenia. Section Two
  • 32. Capacity for (urban eden, human error). 2011. As shown at Gallery Kapelicain Ljubljana, Slovenia. Section Two
  • 33.
  • 34. Why choose plants as the material and meaning for these works of art? What fundamental connections can be explored between carrier/ modulator and genetics/epigenetics and differentiation? Could a time-based, algorithmic and even digital work of visual art be made without a human or computer as its primary actors?
  • 35.
  • 36.
  • 38. The premise for this work is the merging of a living botanical system with the cultural legacy of botanical motifs. By attempting to structure a living organism inside an abstraction of itself, a poetic fractal of consciousness, control, and plasticity unfolds in time. The essence or idealized structure of a living system collides with its material existence. Section Three
  • 40. Plant cells are totipotent. This means that, depending on the ratio of auxins to cytokinins, the cells have the capacity to differentiate into any organ in the plant. Through chemical intervention, functional forumlas embedded in plant cells allow for this quality to be manipulated: cytokinins > auxins = leaves cytokinins < auxins = roots cytokinins = auxins = undifferentiated tissue Section Three
  • 41. cytokinins > auxins = leaves Section Three
  • 42. Time-lapse documentation of leaf cuttings sprouting leaves in-vitro. Section Three
  • 43. Time-lapse documentation of leaf cuttings sprouting leaves in-vitro. Section Three
  • 45. REVERSE ENTROPY? Section Three
  • 47. The installation begins harmoniously, yet the structure is modulated, and disrupted by the varying behaviors, growths, and senescence processes occurring in each unit. The algorithms running on the cells themselves, as they strive to reorganize themselves, can be seen alongside the algorithms of contamination as parasites grow quickly, covering the plant tissue and taking the plant’s nutrients. The structure for the work can no longer be defined with any precision. Section Three
  • 49. Due to the repetition of the pattern, the occupants to the space witness a performative experiment of morphological and ecological changes in each micro-environment over the duration of the exhibit. Section Three
  • 50. Leaf tissue is too Balance in sterility is achieved, Tissue is not sterilized sterilized and their micro-organisms enough and hidden fungi and cells turn brown and contaminating the leaf are not bacteria emerge, growing die. present and leaf tissue over the healthy leaf tissue. remains alive and growing. It takes about a week before Fungi and Bacteria appear in a matter of cells show they are no longer days and weeks and inhibit survival of the living. Can live for months if there is enough leaf tissue. growth medium and can be transplanted as well. Section Three
  • 51. Left: Leaves after being cut with bilaterally symmetrical dies. Right: Die sets. Section Three
  • 52. The process of abstraction widens the granularity of a system, thing, or set of things so that what remains is the unifying and similar essence of the thing being abstracted. Left: Tobacco plant in aerial view. Right: Analogous abstraction composed of 4 petri dishes rotating around a central axis. Section Three
  • 54. Growth Pattern was presented in Hasselt, Belgium, from 21 November 2010 - 13 March 2011 at the Z33. The show was titled Alter Nature: We Can and was curated by Karen Verschooren. The exhibition showed the work of 20 international artists who were manipulating, designing, or displacing nature and biological systems. For my presentation of Growth Pattern, I worked at the University of Hasselt, with biologist Greet Clerx. The process of creation or score for the work was demonstrated in November of 2010 to Greet Clerx. When the work was reproduced in January of 2011, I was not present. Greet Clerx at the University of Hasselt’s greenhouse with the tobacco plants, 2010. Section Three
  • 55. Entropy is the final result, confronting the audience with the very living nature of the work, suggesting that attempting to control a living system in the way one can control the pixels in a computer animation is not only difficult but also defeating the poetry embedded in living systems and the complex interactions that occur in their co-existing micro- environments. Final state of decay as presented at LABoral, Gijon, Spain. Section Three
  • 56. Still from Time-lapse documentation. Beginning and End. Section Three
  • 58. Detail of symmetrical leaf growths. Section Three
  • 59. Detail of symmetrical fungal growths. Section Three
  • 60. Blossfeldt stands out as having begun, in a methodical way, the process of finding idealized and stylized forms within the natural world and taking photographs of them. His photographs transcend documentation of a once living artifact to appear timeless and otherworldly. Karl Blossfeldt, Forsythia suspensa, 1929. Photogravure. Section Three
  • 61. “The drawings of patients with Parkinsonism, as they are “awakened” by L-Dopa, form an instructive analogy. Asked to draw a tree, the Parkinsonian tends to draw a small, meager thing, stunted, impoverished, a bare winter-tree with no foliage at all. As he “warms up”, “comes to”, is animated by L-Dopa, so the tree acquires vigor, life, imagination—and foliage. If he becomes too excited, high, on L-Dopa, the tree may acquire a fantastic ornateness and exuberance, exploding with a florescence of new branches and foliage with little arabesques, curlicues, and what-not, until finally its original form is completely lost beneath this enormous, this baroque, elaboration.” Oliver Sacks, The Man Who Mistook His Wife For A Hat Section Three
  • 62. In my artistic practice, I call for a serious re-evaluation of many of the approaches to dealing with encoding information into living systems. I place strong value on the centuries of embedded biological software, agency, resilience, and evolutionary data that is already residing in every living system. The code guiding the organism is the mystery to be unravelled, the plasticity to be explored, the structure to marvel at and imagine futures from, and the behavior to value, emphasize and render aesthetic. Section Three

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