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EDST - UL
Ecole Doctorale des Sciences
et de Technologie
Université Libanaise
Nanotechnologie et Nano-Biomécanique des
Systèmes Biologiques Complexes
Submitted to Dr. Karim EL KIRAT
February 19th, 2016
Sarah Hussein Master TIS
A G E N D A
Article 1
§  Authors: Marco P. E. Wenger
Laurent Bozec
Michael A. Horton
Patrick Mesquidaz
§  Journal: Biophysical Journal
Volume 93
August 2007
Article 2
§  Authors: Colin A. Grant
David J. Brockwell
Sheena E. Radford
Neil H. Thomson
§  Journal: Biophysical Journal
Volume 97
December 2009
“Mechanical Properties of
Collagen Fibrils”
“Tuning the Elastic Modulus of
Hydrated Collagen Fibrils”
2
Sarah Hussein Master TIS
A G E N D A
Article 1
§  Authors: Marco P. E. Wenger
Laurent Bozec
Michael A. Horton
Patrick Mesquidaz
§  Journal: Biophysical Journal
Volume 93
August 2007
Article 2
§  Authors: Colin A. Grant
David J. Brockwell
Sheena E. Radford
Neil H. Thomson
§  Journal: Biophysical Journal
Volume 97
December 2009
“Mechanical Properties of
Collagen Fibrils”
“Tuning the Elastic Modulus of
Hydrated Collagen Fibrils”
3
Sarah Hussein Master TIS
O U T L I N E S
INTRODUCTION METHODOLOGIES RESULTS CONCLUSIONS
1 2 3 4
4
Sarah Hussein Master TIS
INTRODUCTION
¨  Context
¨  Purpose
1
5
Sarah Hussein Master TIS
I N T R O D U C T I O N
Context
q  Collagen is a very abundant structural protein in mammals
q  It is a major component of connecting tissue, skin, bone, cartilage and tendons
q  The development of collagen model is important
q  There is a lack of convincing and comprehensive structural model for fibrils
q  The biological function of collagen lies in its mechanical properties
q  There is a necessity to determine these mechanical properties at different scales
6
Sarah Hussein Master TIS
I N T R O D U C T I O N
Context (Cont.)
q  These information are important to explain the macroscopic biophysics of
different tissues
q  In addition, it contribute to the understanding of the microscopic structure of
collagen fibrils
q  Conventional macroscopic technical tools are not applicable to Nano fibrils
q  Other techniques are used, the Nano scale indentation is one such a technique
7
Sarah Hussein Master TIS
I N T R O D U C T I O N
Purpose
“To determine the mechanical properties of
individual type I collagen fibrils of rat tail tendon in
air & at room temperature”
“The Young’s modulus is determined
quantitatively using sharp AFM tip in combination
with the Olivier and Pharr indentation model”
8
Sarah Hussein Master TIS
MATERIALS & METHODS
¨  Sample preparation
¨  AFM Imaging
¨  Nano-Indentation by AFM2
9
Sarah Hussein Master TIS
M A T E R I A L S & M E T H O D S
Sample Preparation
q  Type I collagen fibrils extracted from rat tail tendons and stored at 4°C
q  The sample is sectioned with a scalpel and washed in deionized water
q  A microscope glass slide was used as sample substrate
q  It was cleaned with DI water in an ultrasonic bath and rinsed with ethanol and
dried in a stream of nitrogen
q  A few samples deposited on the glass slide and smeared out using tweezers
q  The sample was then dried in a gentle stream of nitrogen
10
Sarah Hussein Master TIS
AFM Imaging
q  AFM imaging and indentation of
collagen fibrils using a Nanowizard AFM
q  All measurements were taken in air and
at room temperature
q  Aluminum-coated, silicon AFM tips of
150 kHz resonance frequency and 4.5
N/m nominal spring constant is used
q  Cantilever chosen to match stiffness of
collagen for optimizing sensitivity & SNR
11
M A T E R I A L S & M E T H O D S
Sarah Hussein Master TIS
Nano Indentation By AFM
12
M A T E R I A L S & M E T H O D S
Sarah Hussein Master TIS
Nano Indentation By AFM (Cont.)
13
M A T E R I A L S & M E T H O D S
Sarah Hussein Master TIS
RESULTS
¨  Young’s Modulus
¨  Anisotropy of Collagen Fibrils
¨  Fibrils Dehydration & Tip Shape
¨  Accuracy of Reduced modulus3
14
Sarah Hussein Master TIS
R E S U L T S
Anisotropy of Collagen Fibrils
q  Two fibrils used from the same sample,
similar in diameter, and aligned
perpendicular to each other
q  The same AFM tip used for experiments
and its orientation was not changed
q  Reduced modulus was found to be in
the range from 5 GPa to 11.5 Gpa
q  Non-uniform shape of the imprints
indicates different material properties in
longitudinal and transversal directions
15
Sarah Hussein Master TIS
R E S U L T S
Fibrils Dehydration & Tip Shape
q  Tendency of the Er to increase slightly
from 6 GPa to 7.5 GPa over three days
q  The indentation depth decreases from
3.5 nm to 2.5 nm
q  Dehydration of collagen fibrils
contributes with 30% to the broad
distribution of fibril moduli
q  Tip shape by AFM imaging revealed a
spherical tip apex
16
Sarah Hussein Master TIS
R E S U L T S
Accuracy of The Reduced Modulus Determination
q  The accuracy of reduced modulus depends on the experimental accuracy of the
determination of the contact area (A) and of the fibril stiffness (SF)
q  Stiffness is directly proportional to the cantilever spring constant: 5% error
q  For contact area, AFM tip radius and indentation depth is considered : 20% for
the radius determination and 10% for the indentation depth à 30%
q  Another possible source of error of contact area are attractive interfacial forces
between AFM tip and sample surface
q  The effects discussed above are assumed to be less relevant in the present work
and were not taken into account
17
Sarah Hussein Master TIS
CONCLUSIONS
¨  Brief Summary
4
18
Sarah Hussein Master TIS
C O N C L U S I O N S
Brief Summary
q  The great advantage of Nano-Indentation is the small size of the indenter
q  Using an indenter with tip apex smaller than the collagen fibril diameter,
indentation caused small imprints
q  The non-uniform shape of these imprints indicates an anisotropic material
structure of collagen fibrils
q  This anisotropy can be neglected as its contribution to the overall experimental
error is smaller than the variation of the stiffness upon fibril dehydration
19
Sarah Hussein Master TIS
A G E N D A
Article 1
§  Authors: Marco P. E. Wenger
Laurent Bozec
Michael A. Horton
Patrick Mesquidaz
§  Journal: Biophysical Journal
Volume 93
August 2007
Article 2
§  Authors: Colin A. Grant
David J. Brockwell
Sheena E. Radford
Neil H. Thomson
§  Journal: Biophysical Journal
Volume 97
December 2009
“Mechanical Properties of
Collagen Fibrils”
“Tuning the Elastic Modulus of
Hydrated Collagen Fibrils”
20
Sarah Hussein Master TIS
O U T L I N E S
INTRODUCTION METHODOLOGIES RESULTS CONCLUSIONS
1 2 3 4
21
Sarah Hussein Master TIS
INTRODUCTION
¨  Context
¨  Purpose
1
22
Sarah Hussein Master TIS
I N T R O D U C T I O N
Context
q  Huge importance of collagen fibrils
q  Collagen has a structure of triple helix of left-handed polypeptide chains coming
together to form right-handed twisted molecule (tropocollagen)
q  The generalized well-known formula for collagen amino acid sequence is Gly-X-
Y, where X is proline (Pro) and Y a hydroxyproline (Hyp) residue
q  Glycine, which occurs at every third residue, is found at the center of the coiled
peptide chain to allow a close packing of the triple helix
23
Sarah Hussein Master TIS
I N T R O D U C T I O N
Context (Cont.)
q  Charged residues make up ~15–20% of residues in tropocollagen, and ~40% of
Gly-X-Y sequences contain at least one charged residue
q  Electrostatic interactions are of great importance for the stability of the triple-
helical conformation with tropocollagen
q  Studies have shown that hydrated collagen fibrils under bulk aqueous solution
conditions have a reduction in modulus compared to the anhydrates
q  Measured hydrated shear modulus changes very little when a cross-linker is
applied to collagen fibrils
24
Sarah Hussein Master TIS
I N T R O D U C T I O N
Purpose
“To highlights the range of elastic response of
collagen type I fibrils that can be achieved in liquid by
altering the environment”
&
“To discuss the finding that the mechanical properties
of hydrated collagenous fibrils can be tuned by
adding salts, by changing the solution pH, or by
changing the solvent”
25
Sarah Hussein Master TIS
MATERIALS & METHODS
¨  AFM & Nano-Indentation
2
26
Sarah Hussein Master TIS
M A T E R I A L S & M E T H O D S
AFM & Nano-Indentation
q  AFM imaging and force measurements were made using silicon nitride
cantilevers with integral tips with spring constants of the order k ~ 0.3 N/m
q  Force volume (FV) imaging was carried out on isolated fibrils using arrays of 50
50 pixels, with each pixel representing a single force-distance measurement
q  The built-in software is used to calculate both the cantilever spring constant and
the reduced elastic modulus (Er), which uses a Hertzian contact theory
27
Sarah Hussein Master TIS
RESULTS
¨  Effect of Fibril Swelling in
Aqueous buffer
¨  Effect of Salt
Concentration
¨  Effect of Altering The
Cation Species
¨  Effect of Lowering pH
¨  Effect of Ethanol
3
28
Sarah Hussein Master TIS
R E S U L T S
Effect of Fibril Swelling in Aqueous buffer
q  Measurements of the same collagen fibrils
demonstrate that stable AFM imaging can be
achieved in liquids
q  Swelling occurs in the hydrated form but does
not change significantly among different
conditions of salt and pH
q  Collagen fibril mechanics are influenced by the
liquid phase of this biocomposite material
29
Sarah Hussein Master TIS
R E S U L T S
Effect of Salt Concentration
q  NaCl was added to the 100 mM sodium
phosphate buffer to concentrations up to 1 M
q  Modulus value showed no appreciable
change up to 500 mM NaCl, but 2.3 times
increase in modulus detected at 1 M NaCl
q  Imaging of the fibril in 1 M NaCl showed no
noticeable change in the morphology
30
Sarah Hussein Master TIS
R E S U L T S
Effect of Altering The Cation Species
q  Various monovalent chloride salt solutions
were used at concentrations up to 1 M
q  Cation species does not influence final value
of elastic modulus at 1 M monovalent
chloride salt
q  Increase in modulus at higher salt
concentration appears to be related to ionic
strength of solution surrounding collagen
31
Sarah Hussein Master TIS
R E S U L T S
Effect of Lowering pH
q  Effect on modulus of adding salt (1 M KCl)
greatly enhanced when the pH was lowered
q  The combined effects of lowering pH to 5
and increasing salt concentration to 1 M
raises the modulus by 10-fold compared
with its value at pH 7 with no salt
q  Increasing the ionic strength gradually
through the use of two different potassium
acetate buffers and and increasing amounts
of KCl, gave a gradual increase in the
measured modulus
32
Sarah Hussein Master TIS
R E S U L T S
Effect of Ethanol
q  Freshly prepared collagen fibril were placed
under an increasing concentration of ethanol
in 100 mM sodium phosphate
q  Modulus steadily increases with increasing
ethanol concentration up to 50%
q  Large increase in modulus was found when
scanning medium increased to 100% ethanol
q  Indentation depths measured from the FV
analysis in 100% ethanol are lower than
those measured in buffer
33
Sarah Hussein Master TIS
CONCLUSIONS
¨  Brief Summary
4
34
Sarah Hussein Master TIS
C O N C L U S I O N S
Brief Summary
q  When salt concentration or ionic strength is increased, hydration or solvation forces
dominate the response
q  When the pH is lowered, ion pair interactions would seem the most likely to
dominate
q  It is also conceivable that hydrophobic effects play a role in all these scenarios but
likely at a lower magnitude than the hydrophilic forces described in each case
q  A better understanding of which forces modulate the elastic response when one
parameter is changed should aid rational design of new materials based on collagen
and analogous synthetic peptides
q  All these effects appear to be fully reversible, which may indicate that it is possible
to modulate tissue elasticity in vivo by directed therapeutics, whether the tissue in
question is natural or bioengineered implants
35
Sarah Hussein Master TIS
THANK YOU
36

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Mechanical Properties of Collagen Fibrils

  • 1. 1 EDST - UL Ecole Doctorale des Sciences et de Technologie Université Libanaise Nanotechnologie et Nano-Biomécanique des Systèmes Biologiques Complexes Submitted to Dr. Karim EL KIRAT February 19th, 2016 Sarah Hussein Master TIS
  • 2. A G E N D A Article 1 §  Authors: Marco P. E. Wenger Laurent Bozec Michael A. Horton Patrick Mesquidaz §  Journal: Biophysical Journal Volume 93 August 2007 Article 2 §  Authors: Colin A. Grant David J. Brockwell Sheena E. Radford Neil H. Thomson §  Journal: Biophysical Journal Volume 97 December 2009 “Mechanical Properties of Collagen Fibrils” “Tuning the Elastic Modulus of Hydrated Collagen Fibrils” 2 Sarah Hussein Master TIS
  • 3. A G E N D A Article 1 §  Authors: Marco P. E. Wenger Laurent Bozec Michael A. Horton Patrick Mesquidaz §  Journal: Biophysical Journal Volume 93 August 2007 Article 2 §  Authors: Colin A. Grant David J. Brockwell Sheena E. Radford Neil H. Thomson §  Journal: Biophysical Journal Volume 97 December 2009 “Mechanical Properties of Collagen Fibrils” “Tuning the Elastic Modulus of Hydrated Collagen Fibrils” 3 Sarah Hussein Master TIS
  • 4. O U T L I N E S INTRODUCTION METHODOLOGIES RESULTS CONCLUSIONS 1 2 3 4 4 Sarah Hussein Master TIS
  • 6. I N T R O D U C T I O N Context q  Collagen is a very abundant structural protein in mammals q  It is a major component of connecting tissue, skin, bone, cartilage and tendons q  The development of collagen model is important q  There is a lack of convincing and comprehensive structural model for fibrils q  The biological function of collagen lies in its mechanical properties q  There is a necessity to determine these mechanical properties at different scales 6 Sarah Hussein Master TIS
  • 7. I N T R O D U C T I O N Context (Cont.) q  These information are important to explain the macroscopic biophysics of different tissues q  In addition, it contribute to the understanding of the microscopic structure of collagen fibrils q  Conventional macroscopic technical tools are not applicable to Nano fibrils q  Other techniques are used, the Nano scale indentation is one such a technique 7 Sarah Hussein Master TIS
  • 8. I N T R O D U C T I O N Purpose “To determine the mechanical properties of individual type I collagen fibrils of rat tail tendon in air & at room temperature” “The Young’s modulus is determined quantitatively using sharp AFM tip in combination with the Olivier and Pharr indentation model” 8 Sarah Hussein Master TIS
  • 9. MATERIALS & METHODS ¨  Sample preparation ¨  AFM Imaging ¨  Nano-Indentation by AFM2 9 Sarah Hussein Master TIS
  • 10. M A T E R I A L S & M E T H O D S Sample Preparation q  Type I collagen fibrils extracted from rat tail tendons and stored at 4°C q  The sample is sectioned with a scalpel and washed in deionized water q  A microscope glass slide was used as sample substrate q  It was cleaned with DI water in an ultrasonic bath and rinsed with ethanol and dried in a stream of nitrogen q  A few samples deposited on the glass slide and smeared out using tweezers q  The sample was then dried in a gentle stream of nitrogen 10 Sarah Hussein Master TIS
  • 11. AFM Imaging q  AFM imaging and indentation of collagen fibrils using a Nanowizard AFM q  All measurements were taken in air and at room temperature q  Aluminum-coated, silicon AFM tips of 150 kHz resonance frequency and 4.5 N/m nominal spring constant is used q  Cantilever chosen to match stiffness of collagen for optimizing sensitivity & SNR 11 M A T E R I A L S & M E T H O D S Sarah Hussein Master TIS
  • 12. Nano Indentation By AFM 12 M A T E R I A L S & M E T H O D S Sarah Hussein Master TIS
  • 13. Nano Indentation By AFM (Cont.) 13 M A T E R I A L S & M E T H O D S Sarah Hussein Master TIS
  • 14. RESULTS ¨  Young’s Modulus ¨  Anisotropy of Collagen Fibrils ¨  Fibrils Dehydration & Tip Shape ¨  Accuracy of Reduced modulus3 14 Sarah Hussein Master TIS
  • 15. R E S U L T S Anisotropy of Collagen Fibrils q  Two fibrils used from the same sample, similar in diameter, and aligned perpendicular to each other q  The same AFM tip used for experiments and its orientation was not changed q  Reduced modulus was found to be in the range from 5 GPa to 11.5 Gpa q  Non-uniform shape of the imprints indicates different material properties in longitudinal and transversal directions 15 Sarah Hussein Master TIS
  • 16. R E S U L T S Fibrils Dehydration & Tip Shape q  Tendency of the Er to increase slightly from 6 GPa to 7.5 GPa over three days q  The indentation depth decreases from 3.5 nm to 2.5 nm q  Dehydration of collagen fibrils contributes with 30% to the broad distribution of fibril moduli q  Tip shape by AFM imaging revealed a spherical tip apex 16 Sarah Hussein Master TIS
  • 17. R E S U L T S Accuracy of The Reduced Modulus Determination q  The accuracy of reduced modulus depends on the experimental accuracy of the determination of the contact area (A) and of the fibril stiffness (SF) q  Stiffness is directly proportional to the cantilever spring constant: 5% error q  For contact area, AFM tip radius and indentation depth is considered : 20% for the radius determination and 10% for the indentation depth à 30% q  Another possible source of error of contact area are attractive interfacial forces between AFM tip and sample surface q  The effects discussed above are assumed to be less relevant in the present work and were not taken into account 17 Sarah Hussein Master TIS
  • 19. C O N C L U S I O N S Brief Summary q  The great advantage of Nano-Indentation is the small size of the indenter q  Using an indenter with tip apex smaller than the collagen fibril diameter, indentation caused small imprints q  The non-uniform shape of these imprints indicates an anisotropic material structure of collagen fibrils q  This anisotropy can be neglected as its contribution to the overall experimental error is smaller than the variation of the stiffness upon fibril dehydration 19 Sarah Hussein Master TIS
  • 20. A G E N D A Article 1 §  Authors: Marco P. E. Wenger Laurent Bozec Michael A. Horton Patrick Mesquidaz §  Journal: Biophysical Journal Volume 93 August 2007 Article 2 §  Authors: Colin A. Grant David J. Brockwell Sheena E. Radford Neil H. Thomson §  Journal: Biophysical Journal Volume 97 December 2009 “Mechanical Properties of Collagen Fibrils” “Tuning the Elastic Modulus of Hydrated Collagen Fibrils” 20 Sarah Hussein Master TIS
  • 21. O U T L I N E S INTRODUCTION METHODOLOGIES RESULTS CONCLUSIONS 1 2 3 4 21 Sarah Hussein Master TIS
  • 23. I N T R O D U C T I O N Context q  Huge importance of collagen fibrils q  Collagen has a structure of triple helix of left-handed polypeptide chains coming together to form right-handed twisted molecule (tropocollagen) q  The generalized well-known formula for collagen amino acid sequence is Gly-X- Y, where X is proline (Pro) and Y a hydroxyproline (Hyp) residue q  Glycine, which occurs at every third residue, is found at the center of the coiled peptide chain to allow a close packing of the triple helix 23 Sarah Hussein Master TIS
  • 24. I N T R O D U C T I O N Context (Cont.) q  Charged residues make up ~15–20% of residues in tropocollagen, and ~40% of Gly-X-Y sequences contain at least one charged residue q  Electrostatic interactions are of great importance for the stability of the triple- helical conformation with tropocollagen q  Studies have shown that hydrated collagen fibrils under bulk aqueous solution conditions have a reduction in modulus compared to the anhydrates q  Measured hydrated shear modulus changes very little when a cross-linker is applied to collagen fibrils 24 Sarah Hussein Master TIS
  • 25. I N T R O D U C T I O N Purpose “To highlights the range of elastic response of collagen type I fibrils that can be achieved in liquid by altering the environment” & “To discuss the finding that the mechanical properties of hydrated collagenous fibrils can be tuned by adding salts, by changing the solution pH, or by changing the solvent” 25 Sarah Hussein Master TIS
  • 26. MATERIALS & METHODS ¨  AFM & Nano-Indentation 2 26 Sarah Hussein Master TIS
  • 27. M A T E R I A L S & M E T H O D S AFM & Nano-Indentation q  AFM imaging and force measurements were made using silicon nitride cantilevers with integral tips with spring constants of the order k ~ 0.3 N/m q  Force volume (FV) imaging was carried out on isolated fibrils using arrays of 50 50 pixels, with each pixel representing a single force-distance measurement q  The built-in software is used to calculate both the cantilever spring constant and the reduced elastic modulus (Er), which uses a Hertzian contact theory 27 Sarah Hussein Master TIS
  • 28. RESULTS ¨  Effect of Fibril Swelling in Aqueous buffer ¨  Effect of Salt Concentration ¨  Effect of Altering The Cation Species ¨  Effect of Lowering pH ¨  Effect of Ethanol 3 28 Sarah Hussein Master TIS
  • 29. R E S U L T S Effect of Fibril Swelling in Aqueous buffer q  Measurements of the same collagen fibrils demonstrate that stable AFM imaging can be achieved in liquids q  Swelling occurs in the hydrated form but does not change significantly among different conditions of salt and pH q  Collagen fibril mechanics are influenced by the liquid phase of this biocomposite material 29 Sarah Hussein Master TIS
  • 30. R E S U L T S Effect of Salt Concentration q  NaCl was added to the 100 mM sodium phosphate buffer to concentrations up to 1 M q  Modulus value showed no appreciable change up to 500 mM NaCl, but 2.3 times increase in modulus detected at 1 M NaCl q  Imaging of the fibril in 1 M NaCl showed no noticeable change in the morphology 30 Sarah Hussein Master TIS
  • 31. R E S U L T S Effect of Altering The Cation Species q  Various monovalent chloride salt solutions were used at concentrations up to 1 M q  Cation species does not influence final value of elastic modulus at 1 M monovalent chloride salt q  Increase in modulus at higher salt concentration appears to be related to ionic strength of solution surrounding collagen 31 Sarah Hussein Master TIS
  • 32. R E S U L T S Effect of Lowering pH q  Effect on modulus of adding salt (1 M KCl) greatly enhanced when the pH was lowered q  The combined effects of lowering pH to 5 and increasing salt concentration to 1 M raises the modulus by 10-fold compared with its value at pH 7 with no salt q  Increasing the ionic strength gradually through the use of two different potassium acetate buffers and and increasing amounts of KCl, gave a gradual increase in the measured modulus 32 Sarah Hussein Master TIS
  • 33. R E S U L T S Effect of Ethanol q  Freshly prepared collagen fibril were placed under an increasing concentration of ethanol in 100 mM sodium phosphate q  Modulus steadily increases with increasing ethanol concentration up to 50% q  Large increase in modulus was found when scanning medium increased to 100% ethanol q  Indentation depths measured from the FV analysis in 100% ethanol are lower than those measured in buffer 33 Sarah Hussein Master TIS
  • 35. C O N C L U S I O N S Brief Summary q  When salt concentration or ionic strength is increased, hydration or solvation forces dominate the response q  When the pH is lowered, ion pair interactions would seem the most likely to dominate q  It is also conceivable that hydrophobic effects play a role in all these scenarios but likely at a lower magnitude than the hydrophilic forces described in each case q  A better understanding of which forces modulate the elastic response when one parameter is changed should aid rational design of new materials based on collagen and analogous synthetic peptides q  All these effects appear to be fully reversible, which may indicate that it is possible to modulate tissue elasticity in vivo by directed therapeutics, whether the tissue in question is natural or bioengineered implants 35 Sarah Hussein Master TIS