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41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
Learning Clustersin Autism Spectrum Disorder:
Image-BasedClusteringof Eye-TrackingScanpathswith
DeepAutoencoder
Mahmoud Elbattah, Romuald Carette, Gilles Dequen, Jean-Luc Guérin, Federica Cilia
Université de Picardie Jules Verne (UPJV), France
mahmoud.elbattah@u-picardie.fr
https://mahmoud-elbattah.github.io/ML4Autism
https://ieeexplore.ieee.org/document/8856904
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
Background:Autism SpectrumDisorder
• Autism Spectrum Disorder (ASD) is a pervasive developmental disorder
characterised by a set of impairments including social communication problems.1
• ASD has been considered to affect about 1% of the world’s population (US Dep. of
Health, 2018). 2
• The hallmark of autism is an impairment of the ability to make and maintain eye
contact. 3
2
1 L. Wing, and J. Gould, “Severe Impairments of Social Interaction and AssociatedAbnormalitiesin Children: Epidemiologyand
Classification”.Journal of Autism and DevelopmentalDisorders,9(1), pp.11-29,1979.
2
U.S. Departmentof Health & Human Services.Data and statistics | autism spectrum disorder(asd) | ncbddd | cdc, 2018.URL:
https://www.cdc.gov/ncbddd/autism/data.html.
3
Coonrod,E. E. and Stone, W. L. (2004).Early concerns of parents of children with autistic and nonautistic disorders.Infants & Young
Children, 17(3),258–268.
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
Background:Eye-TrackingTechnology
3
Image Source: https://imotions.com/blog/eye-tracking/
J.H. Goldberg, and J.I. Helfman, “Visual scanpath representation”, In Proceedings of the 2010 Symposium on Eye-Tracking Research &
Applications, ACM, 2010, pp. 203-210.
Scan-path
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
Key Idea:
Learningthe VisualPatternsof Eye-TrackingScanpaths
4
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
MotivationalQuestions
• Would the visual patterns of eye-tracking scanpaths indicate an underlying structure
of clusters?
• If so, could the clusters discovered reveal possible connections related to the
dynamics of gaze behavior (e.g. velocity, acceleration)?
• Further, how would clusters vary with respect to the characteristics of participants
(e.g. age)?
5
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
Data Description
• 59 participants.
• Avg age 7.88 years old.
• 547 images: 328 (Non-ASD), 219 (ASD)
• Image dimensions: 640x480
6
ASD Non-ASD
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
FeatureExtractionUsingAutoencoder
7
• A multi-layered ANN performs the functionality of encoding and decoding of images
as follows.
Encoding:
• The encoder takes an image (100x100) at the input layer.
• The compression process is conducted over four hidden layers.
• The concentration of neuros continues to gradually decrease down to 500 units, which
contain the final image codings.
• Decoding:
• The decoder is a flipped copy of the encoder.
• In an inverse fashion, the number of neurons progressively increased all the way back to
the original dimension (i.e. 10k units).
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
FeatureExtractionUsingAutoencoder (cont’d)
8
The autoencoder architecture.
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
AutoencoderAccuracy
9
Training loss (blue) and validation loss (red) over 100 epochs.
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
AutoencoderAccuracy (cont’d)
10
Sample images produced by the autoencoder.
The first row gives the original images, while below are the
reconstructed images by the autoencoder.
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
K-MeansClusteringExperiments
11
0
0.1
0.2
0.3
0.4
0.5
0.6
0.7
0.8
0.9
1
Pixel-Based
Features
PCA-Based
Features
t-SNE-Based
Features
Autoencoder
Features
SilhouetteScore
K=2 K=3 K=4
Quality of clusters based on the Silhouette score.
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
ClusterAnalysis
12
Cluster
Percentage of ASD
Participants
Avg. Age (years)
Cluster 1 33% 8.2
Cluster 2 85% 8.7
Cluster
Percentage of ASD
Participants
Avg. Age (years)
Cluster 1 28% 7.95
Cluster 2 49% 8.76
Cluster 3 94% 9.02
Summary of Clusters (K=2)
Summary of Clusters (K=3)
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
ClusterAnalysis(cont’d)
13
The variation of gaze velocity in clusters (K=2). The variation of gaze acceleration in clusters (K=2).
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
ClusterAnalysis(cont’d)
14
The variation of velocity in clusters (K=3).
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
Conclusions
• The clustering experiments confirmed the applicability of the image-based clustering using
eye-tracking scanpaths.
• This could translate into that scanpath visualizations could largely discriminate the ASD-
diagnosed samples from others.
• Furthermore, the cluster analysis could reveal potential connections between the dynamics of
gaze behaviour and autism.
• From a practical standpoint, the deep autoencoder played a key role in learning efficient
compressed representations of images.
• The study gives promising prospects for employing such visual patterns for developing
assistive diagnostic tools including classification models.
15
41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC)
Thank You!
mahmoud.elbattah@u-picardie.fr
Find the original publication on:
• https://ieeexplore.ieee.org/document/8856904
Dataset available on Figshare:
• https://figshare.com/articles/Visualization_of_Eye-
Tracking_Scanpaths_in_Autism_Spectrum_Disorder_Image_Dataset/7073087
Project Website:
• https://mahmoud-elbattah.github.io/ML4Autism/
• https://www.researchgate.net/project/Predicting-Autism-Spectrum-Disorder-Using-Machine-
Learning-and-Eye-Tracking

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Learning Clusters in Autism Spectrum Disorder: Image-Based Clustering of Eye-Tracking Scanpaths with Deep Autoencoder

  • 1. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) Learning Clustersin Autism Spectrum Disorder: Image-BasedClusteringof Eye-TrackingScanpathswith DeepAutoencoder Mahmoud Elbattah, Romuald Carette, Gilles Dequen, Jean-Luc Guérin, Federica Cilia Université de Picardie Jules Verne (UPJV), France mahmoud.elbattah@u-picardie.fr https://mahmoud-elbattah.github.io/ML4Autism https://ieeexplore.ieee.org/document/8856904
  • 2. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) Background:Autism SpectrumDisorder • Autism Spectrum Disorder (ASD) is a pervasive developmental disorder characterised by a set of impairments including social communication problems.1 • ASD has been considered to affect about 1% of the world’s population (US Dep. of Health, 2018). 2 • The hallmark of autism is an impairment of the ability to make and maintain eye contact. 3 2 1 L. Wing, and J. Gould, “Severe Impairments of Social Interaction and AssociatedAbnormalitiesin Children: Epidemiologyand Classification”.Journal of Autism and DevelopmentalDisorders,9(1), pp.11-29,1979. 2 U.S. Departmentof Health & Human Services.Data and statistics | autism spectrum disorder(asd) | ncbddd | cdc, 2018.URL: https://www.cdc.gov/ncbddd/autism/data.html. 3 Coonrod,E. E. and Stone, W. L. (2004).Early concerns of parents of children with autistic and nonautistic disorders.Infants & Young Children, 17(3),258–268.
  • 3. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) Background:Eye-TrackingTechnology 3 Image Source: https://imotions.com/blog/eye-tracking/ J.H. Goldberg, and J.I. Helfman, “Visual scanpath representation”, In Proceedings of the 2010 Symposium on Eye-Tracking Research & Applications, ACM, 2010, pp. 203-210. Scan-path
  • 4. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) Key Idea: Learningthe VisualPatternsof Eye-TrackingScanpaths 4
  • 5. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) MotivationalQuestions • Would the visual patterns of eye-tracking scanpaths indicate an underlying structure of clusters? • If so, could the clusters discovered reveal possible connections related to the dynamics of gaze behavior (e.g. velocity, acceleration)? • Further, how would clusters vary with respect to the characteristics of participants (e.g. age)? 5
  • 6. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) Data Description • 59 participants. • Avg age 7.88 years old. • 547 images: 328 (Non-ASD), 219 (ASD) • Image dimensions: 640x480 6 ASD Non-ASD
  • 7. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) FeatureExtractionUsingAutoencoder 7 • A multi-layered ANN performs the functionality of encoding and decoding of images as follows. Encoding: • The encoder takes an image (100x100) at the input layer. • The compression process is conducted over four hidden layers. • The concentration of neuros continues to gradually decrease down to 500 units, which contain the final image codings. • Decoding: • The decoder is a flipped copy of the encoder. • In an inverse fashion, the number of neurons progressively increased all the way back to the original dimension (i.e. 10k units).
  • 8. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) FeatureExtractionUsingAutoencoder (cont’d) 8 The autoencoder architecture.
  • 9. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) AutoencoderAccuracy 9 Training loss (blue) and validation loss (red) over 100 epochs.
  • 10. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) AutoencoderAccuracy (cont’d) 10 Sample images produced by the autoencoder. The first row gives the original images, while below are the reconstructed images by the autoencoder.
  • 11. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) K-MeansClusteringExperiments 11 0 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1 Pixel-Based Features PCA-Based Features t-SNE-Based Features Autoencoder Features SilhouetteScore K=2 K=3 K=4 Quality of clusters based on the Silhouette score.
  • 12. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) ClusterAnalysis 12 Cluster Percentage of ASD Participants Avg. Age (years) Cluster 1 33% 8.2 Cluster 2 85% 8.7 Cluster Percentage of ASD Participants Avg. Age (years) Cluster 1 28% 7.95 Cluster 2 49% 8.76 Cluster 3 94% 9.02 Summary of Clusters (K=2) Summary of Clusters (K=3)
  • 13. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) ClusterAnalysis(cont’d) 13 The variation of gaze velocity in clusters (K=2). The variation of gaze acceleration in clusters (K=2).
  • 14. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) ClusterAnalysis(cont’d) 14 The variation of velocity in clusters (K=3).
  • 15. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) Conclusions • The clustering experiments confirmed the applicability of the image-based clustering using eye-tracking scanpaths. • This could translate into that scanpath visualizations could largely discriminate the ASD- diagnosed samples from others. • Furthermore, the cluster analysis could reveal potential connections between the dynamics of gaze behaviour and autism. • From a practical standpoint, the deep autoencoder played a key role in learning efficient compressed representations of images. • The study gives promising prospects for employing such visual patterns for developing assistive diagnostic tools including classification models. 15
  • 16. 41st Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) Thank You! mahmoud.elbattah@u-picardie.fr Find the original publication on: • https://ieeexplore.ieee.org/document/8856904 Dataset available on Figshare: • https://figshare.com/articles/Visualization_of_Eye- Tracking_Scanpaths_in_Autism_Spectrum_Disorder_Image_Dataset/7073087 Project Website: • https://mahmoud-elbattah.github.io/ML4Autism/ • https://www.researchgate.net/project/Predicting-Autism-Spectrum-Disorder-Using-Machine- Learning-and-Eye-Tracking