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IntelliSys 2016
Using Machine Learning to Predict Length
of Stay and Discharge Destination for
Hip-Fracture Patients
Mahmoud Elbattah, Owen Molloy
mahmoud.elbattah@nuigalway.ie
IntelliSys 2016
Background:
Hip Fracture Care in Ireland
2
IntelliSys 2016
Our Focus: Hip Fracture Care in Ireland
3Figure1. Elderly Patient Journey
IntelliSys 2016
Study Objectives
4
IntelliSys 2016
Questions of Interest
1) How to predict the inpatient length of stay (LOS)?
2) How to predict the patient’s discharge destination?
5
IntelliSys 2016
Significance of the Study
LOS:
• A significant measure of
patient outcomes [1-3].
• A valid proxy to measure the
consumption of hospital
resources.
• Reported as the main
component of the overall cost
of hip fracture care [4].
Discharge Destination:
• Having a strategic importance
in order to estimate the needed
capacity of long-stay care
facilities such as nursing
homes.
Why predicting inpatient LOS and discharge destination is
important?
6
IntelliSys 2016
Significance of the Study: A Bigger Picture
7
Machine Learning
Predict LOS and
Discharge Destination
Patient-Focused Perspective
+ Simulation Modeling
Modeling Projected
Flow of Elderly Patients
Population-Driven Perspective
IntelliSys 2016
Methodology
IntelliSys 2016
Overview
• Training a regression model for predicting the LOS.
• Training a multi-class classifier for predicting the
discharge destination.
9
IntelliSys 2016
Data Description
• Irish Hip Fracture Database (IHFD).
• Patient records in the year 2013.
• Patients aged 60 and over.
• 38 data fields such as gender, age, type of fracture, date
of admission, and LOS.
10
IntelliSys 2016
Data Anomalies: Outliers
11
Figure 2. Histogram and probability density of the LOS variable.
The outliers can be observed when the LOS becomes longer than
40 days.
IntelliSys 2016
Data Anomalies: Imbalances
12
Figure 3. The imbalanced training samples, where figures (a) and (b) plot
histograms of inpatient LOS and discharge destination respectively.
IntelliSys 2016
Feature Selection
LOS Regression Model:
• Hospital Admitted to
• Age
• ICD-10 Diagnosis
• Fracture Type
• Patient Gender
• Fragility History
Discharge Destination
Classifier:
• Hospital Admitted to
• Age
• LOS
• Residence Area
• Patient Gender
13
* The features were decided based on the permutation importance method [5]
IntelliSys 2016
Learning Algorithm: Random Forests
Source: https://scholar.google.com/citations?user=mXSv_1UAAAAj
IntelliSys 2016
Paying Tribute to Leo Breiman (1928-2005)
15
IntelliSys 2016
Learning Algorithm: Random Forests
• A Random Forest is a classifier consisting of a collection of
tree-structured classifiers {h(x, Θk ), k = 1,...} where the {Θk}
are independent identically distributed random vectors and
each tree casts a unit vote for the most popular class at input x.
• The common element in all of these procedures is that for the
kth tree, a random vector Θk is generated, independently of the
past random vectors Θ1,..., Θk−1 but with the same distribution;
and a tree is grown using the training set and Θk , resulting in a
classifier h(x, Θk) where x is an input vector.
16Source: Breiman, L., 2001. Random forests. Machine learning, 45(1), pp.5-32.
IntelliSys 2016
Learning Algorithm: Random Forests
17
𝑝 𝑐 𝑣 =
1
𝑇
෍
𝑡=1
𝑇
𝑝𝑡(𝑐|𝑣)
, where pt(c|v) denotes the posterior distribution obtained by the t-th
tree.
IntelliSys 2016
Experimental Results
IntelliSys 2016
Experimental Results:
RegressionAccuracy Based on 10-Fold Cross-Validation
(LOS)
19
Algorithm Relative Absolute Error (≈)
Random Forests 0.26
Boosted Decision Tree 0.34
Neural Network 0.55
Linear Regression 0.93
IntelliSys 2016
Experimental Results:
ClassificationAccuracy Based on 10-fold Cross-
Validation (Discharge Destination)
20
Algorithm Precision (≈) Recall (≈) Overall
Classification
Accuracy (≈)
Random Forest 0.88 0.87 0.88
Neural Network 0.71 0.72 0.72
Logistic Regression 0.61 0.60 0.62
IntelliSys 2016
Full-Text Paper
• https://www.researchgate.net/publication/319198340_Using_Machine_Learni
ng_to_Predict_Length_of_Stay_and_Discharge_Destination_for_Hip-
Fracture_Patients
• https://link.springer.com/chapter/10.1007/978-3-319-56994-9_15
21
IntelliSys 2016
References
1. O'Keefe, G.E., Jurkovich, G.J. and Maier, R.V., 1999. Defining excess resource
utilization and identifying associated factors for trauma victims. Journal of Trauma
and Acute Care Surgery, 46(3), pp.473-478.
2. Englert, J., Davis, K.M. and Koch, K.E., 2001. Using clinical practice analysis to
improve care. Joint Commission Journal on Quality and Patient Safety, 27(6),
pp.291-301.
3. Guru, V., Anderson, G.M., Fremes, S.E., O’Connor, G.T., Grover, F.L., Tu, J.V. and
Consensus, C.C.S.Q.I., 2005. The identification and development of Canadian
coronary artery bypass graft surgery quality indicators. The Journal of thoracic and
cardiovascular surgery, 130(5), pp.1257-e1.
4. Johansen, A., Wakeman, R., Boulton, C., Plant, F., Roberts, J. and Williams, A.,
2013. National Hip Fracture Database: National Report 2013. Clinical Effectiveness
and Evaluation Unit at the Royal College of Physicians.
5. Altmann, A., Toloşi, L., Sander, O. and Lengauer, T., 2010. Permutation importance:
a corrected feature importance measure. Bioinformatics, 26(10), pp.1340-1347.
6. Breiman, L., 2001. Random forests. Machine learning, 45(1), pp.5-32.
7. Brailsford, S. and Vissers, J., 2011. OR in healthcare: A European
perspective. European journal of operational research, 212(2), pp.223-234.
22
IntelliSys 2016
THANK YOU!
mahmoud.elbattah@nuigalway.ie

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Using Machine Learning to Predict Length of Stay and Discharge Destination for Hip-Fracture Patients

  • 1. IntelliSys 2016 Using Machine Learning to Predict Length of Stay and Discharge Destination for Hip-Fracture Patients Mahmoud Elbattah, Owen Molloy mahmoud.elbattah@nuigalway.ie
  • 3. IntelliSys 2016 Our Focus: Hip Fracture Care in Ireland 3Figure1. Elderly Patient Journey
  • 5. IntelliSys 2016 Questions of Interest 1) How to predict the inpatient length of stay (LOS)? 2) How to predict the patient’s discharge destination? 5
  • 6. IntelliSys 2016 Significance of the Study LOS: • A significant measure of patient outcomes [1-3]. • A valid proxy to measure the consumption of hospital resources. • Reported as the main component of the overall cost of hip fracture care [4]. Discharge Destination: • Having a strategic importance in order to estimate the needed capacity of long-stay care facilities such as nursing homes. Why predicting inpatient LOS and discharge destination is important? 6
  • 7. IntelliSys 2016 Significance of the Study: A Bigger Picture 7 Machine Learning Predict LOS and Discharge Destination Patient-Focused Perspective + Simulation Modeling Modeling Projected Flow of Elderly Patients Population-Driven Perspective
  • 9. IntelliSys 2016 Overview • Training a regression model for predicting the LOS. • Training a multi-class classifier for predicting the discharge destination. 9
  • 10. IntelliSys 2016 Data Description • Irish Hip Fracture Database (IHFD). • Patient records in the year 2013. • Patients aged 60 and over. • 38 data fields such as gender, age, type of fracture, date of admission, and LOS. 10
  • 11. IntelliSys 2016 Data Anomalies: Outliers 11 Figure 2. Histogram and probability density of the LOS variable. The outliers can be observed when the LOS becomes longer than 40 days.
  • 12. IntelliSys 2016 Data Anomalies: Imbalances 12 Figure 3. The imbalanced training samples, where figures (a) and (b) plot histograms of inpatient LOS and discharge destination respectively.
  • 13. IntelliSys 2016 Feature Selection LOS Regression Model: • Hospital Admitted to • Age • ICD-10 Diagnosis • Fracture Type • Patient Gender • Fragility History Discharge Destination Classifier: • Hospital Admitted to • Age • LOS • Residence Area • Patient Gender 13 * The features were decided based on the permutation importance method [5]
  • 14. IntelliSys 2016 Learning Algorithm: Random Forests Source: https://scholar.google.com/citations?user=mXSv_1UAAAAj
  • 15. IntelliSys 2016 Paying Tribute to Leo Breiman (1928-2005) 15
  • 16. IntelliSys 2016 Learning Algorithm: Random Forests • A Random Forest is a classifier consisting of a collection of tree-structured classifiers {h(x, Θk ), k = 1,...} where the {Θk} are independent identically distributed random vectors and each tree casts a unit vote for the most popular class at input x. • The common element in all of these procedures is that for the kth tree, a random vector Θk is generated, independently of the past random vectors Θ1,..., Θk−1 but with the same distribution; and a tree is grown using the training set and Θk , resulting in a classifier h(x, Θk) where x is an input vector. 16Source: Breiman, L., 2001. Random forests. Machine learning, 45(1), pp.5-32.
  • 17. IntelliSys 2016 Learning Algorithm: Random Forests 17 𝑝 𝑐 𝑣 = 1 𝑇 ෍ 𝑡=1 𝑇 𝑝𝑡(𝑐|𝑣) , where pt(c|v) denotes the posterior distribution obtained by the t-th tree.
  • 19. IntelliSys 2016 Experimental Results: RegressionAccuracy Based on 10-Fold Cross-Validation (LOS) 19 Algorithm Relative Absolute Error (≈) Random Forests 0.26 Boosted Decision Tree 0.34 Neural Network 0.55 Linear Regression 0.93
  • 20. IntelliSys 2016 Experimental Results: ClassificationAccuracy Based on 10-fold Cross- Validation (Discharge Destination) 20 Algorithm Precision (≈) Recall (≈) Overall Classification Accuracy (≈) Random Forest 0.88 0.87 0.88 Neural Network 0.71 0.72 0.72 Logistic Regression 0.61 0.60 0.62
  • 21. IntelliSys 2016 Full-Text Paper • https://www.researchgate.net/publication/319198340_Using_Machine_Learni ng_to_Predict_Length_of_Stay_and_Discharge_Destination_for_Hip- Fracture_Patients • https://link.springer.com/chapter/10.1007/978-3-319-56994-9_15 21
  • 22. IntelliSys 2016 References 1. O'Keefe, G.E., Jurkovich, G.J. and Maier, R.V., 1999. Defining excess resource utilization and identifying associated factors for trauma victims. Journal of Trauma and Acute Care Surgery, 46(3), pp.473-478. 2. Englert, J., Davis, K.M. and Koch, K.E., 2001. Using clinical practice analysis to improve care. Joint Commission Journal on Quality and Patient Safety, 27(6), pp.291-301. 3. Guru, V., Anderson, G.M., Fremes, S.E., O’Connor, G.T., Grover, F.L., Tu, J.V. and Consensus, C.C.S.Q.I., 2005. The identification and development of Canadian coronary artery bypass graft surgery quality indicators. The Journal of thoracic and cardiovascular surgery, 130(5), pp.1257-e1. 4. Johansen, A., Wakeman, R., Boulton, C., Plant, F., Roberts, J. and Williams, A., 2013. National Hip Fracture Database: National Report 2013. Clinical Effectiveness and Evaluation Unit at the Royal College of Physicians. 5. Altmann, A., Toloşi, L., Sander, O. and Lengauer, T., 2010. Permutation importance: a corrected feature importance measure. Bioinformatics, 26(10), pp.1340-1347. 6. Breiman, L., 2001. Random forests. Machine learning, 45(1), pp.5-32. 7. Brailsford, S. and Vissers, J., 2011. OR in healthcare: A European perspective. European journal of operational research, 212(2), pp.223-234. 22