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Xenobiotics
Definition of Xenobiotics
• Xenobiotics: is a compound that is foreign to the
body ; is a chemical which is found in an organism
but which is not normally produced or expected to
be present in body.
Endogenous: Pigments , hormone
Non-endogenous: such as drugs , food additives,
pollutants, toxin, etc
• Most of these compounds are subject to
metabolism (biotransformation) in human body
Definition of the biotransformation
Conversion of lipophilic xenobiotics to water-soluble chemicals
by a process catalyzed by enzymes in the liver and other tissues.
In most cases, biotransformation lessens the toxicity of
xenobiotics, but many must undergo the process to exert their
toxic effects.
Purpose of biotransformation
Facilitates excretion: Converts lipophilic to hydrophilic
compounds
Detoxification/inactivation: converts chemicals to less
toxic forms
Metabolic activation: converts chemicals to more toxic
active forms
Factors affecting drug metabolism
Genetic variations: genetic polymorphisms in drug-metabolizing
enzymes can lead to variable responses to medications.
Age-related changes and sex hormones influence enzyme activity.
Liver and renal function: can impair metabolism and elimination.
Drug-drug interactions: can alter enzyme activity, affecting
metabolism.
Environmental factors, smoking, and alcohol consumption, can
induce specific enzymes.
Disease states and hormonal changes: impact drug metabolism.
And nutritional status: adequate nutrition is essential for optimal
enzyme function.
Biotransformation
Phase I
Introduction of functional group
Hydrophilicity increases slightly
May inactivate or activate original compound
major player is CYP or mixed function oxygenase
(MFO) system in conjunction with NAD(P)H
Location of reactions is smooth endoplasmic
reticulum
Sites of biotransformation
Primary site: Liver
 Rich in enzymes which Acts on endogenous and exogenous
compounds
Extrahepatic metabolism sites; Intestinal wall Sulfate conjugation
Esterase and lipases - important in prodrug metabolism Lungs,
kidney, placenta, brain, skin, adrenal glands
Phase I- Biotransformation Activation
Biotransformation Activation of xenobiotics is a key
element (e.g. benzene, vinyl chloride) –
Reactive intermediates include epoxides and free radical
species (unpaired electrons) that are short-lived and hence
highly reactive
Protection is provided by endogenous antioxidant
substances, e.g. GSH vitamins C and E antioxidant
enzymes, SOD, GPX, CAT in coupled reactions
Antioxidant molecules are oxidized in the process but have
the capacity to regenerate the reduced form from the
oxidized - NAD(P)H is a key player
Cytochrome P450 (CYP) Mixed Function Oxidases (MFO)
Located in many tissues but highly in liver ER Human:
16 gene families CYP 1,2,3 perform drug metabolism >48 genes
sequenced Key forms:
CYP1A2, CYP2C9, CYP2C19, CYP2D6, CYP2E1, and CYP3A4
Highly inducible –
AlcoholCYP2E1
Dioxin/PCBs CYP1A
Barbiturates
 Microsomal Mixed Function Oxidases (MFOs) Flavoprotein,
 NADPH-monooxygenase Cytochrome P450
 Non-cytochrome oxidizing enzymes.
 Xanthine oxidase Alcohol/aldehyde dehydrogenase
Cytochrome P450 (CYP) Mixed Function Oxidases
(MFO)
Phase I metabolizing enzymes
Metabolic enzymes
Drug metabolism Refers to enzyme-mediated biotransformations
(detoxication) that alter the pharmacological activity of both
endogenous and exogenous compounds.
Examples
Quizzes
Describe hydrolysis process of
esters and amides
Organophosphates
Epoxides
Describe the reductions of Azo and Nitro compounds
Elaborate on benezene transformation to leukemia causing
metabolites
Phase II
Conjugation with endogenous molecules (GSH, glycine, cystein,
glucuronic acid)
Hydrophilicity increases substantially
Neutralization of active metabolic intermediates
Facilitation of elimination
Location of reactions is cytoplasm
Types of reactions
PHASE II (CONJUGATION) OR CONJUGATIVE ENZYMES
• Phase II conjugative enzymes
metabolize drugs by attaching
(conjugating) a more polar
molecule to the original drug
molecule to increase water
solubility.
• thereby permitting more rapid
drug excretion.
• This conjugation can occur
following a phase I reaction
involving the molecule, but prior
metabolism is not required.
• The phase II enzymes typically
consist of multiple isoforms,
analogous to the CYPs, but to
date are less well defined.
Glucourinic acid conjugation
Acetylation
glycine conjugation
Sulfonation
Methylation
Glucourinic acid conjugation
This is the most common.
The active form of glucoronic acid is UDP-glucoronic acid in
uronic acid pathway.
UDP-glucuronyltransferasesare the enzymes which participate in
glucuronide formation.
It occurs with compounds containing hydroxyl , carbonyl,
sulfhydryl or amino groups.
Strongly acidic compounds which are more soluble in water are
produced – hence more easily excreted.
Glycine conjugation
Aromatic carboxylic acids are conjugated with glycine.
When benzoyl CoA is conjugated with glycine, hippuric
acid is formed.
Sulfonation
• The active form 3’-phosphoadenosine 5-
phosphosulfate(PAPS) participates in conjugation.
• Enzyme sulfotransferase in involved.
• Aliphatic & aromatic compounds undergo sulfation.
Methylation
Methyl group of S-adenosylmethionine is used to methylate
many compounds.
Enzyme methyl transferase is used.
Acetylation
Acetyl CoA is the active form .
Drugs like sulfanilamide are converted to acetyl
derivatives.

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xenobiotics chemistry and drug metabolism

  • 2. Definition of Xenobiotics • Xenobiotics: is a compound that is foreign to the body ; is a chemical which is found in an organism but which is not normally produced or expected to be present in body. Endogenous: Pigments , hormone Non-endogenous: such as drugs , food additives, pollutants, toxin, etc • Most of these compounds are subject to metabolism (biotransformation) in human body
  • 3. Definition of the biotransformation Conversion of lipophilic xenobiotics to water-soluble chemicals by a process catalyzed by enzymes in the liver and other tissues. In most cases, biotransformation lessens the toxicity of xenobiotics, but many must undergo the process to exert their toxic effects. Purpose of biotransformation Facilitates excretion: Converts lipophilic to hydrophilic compounds Detoxification/inactivation: converts chemicals to less toxic forms Metabolic activation: converts chemicals to more toxic active forms
  • 4. Factors affecting drug metabolism Genetic variations: genetic polymorphisms in drug-metabolizing enzymes can lead to variable responses to medications. Age-related changes and sex hormones influence enzyme activity. Liver and renal function: can impair metabolism and elimination. Drug-drug interactions: can alter enzyme activity, affecting metabolism. Environmental factors, smoking, and alcohol consumption, can induce specific enzymes. Disease states and hormonal changes: impact drug metabolism. And nutritional status: adequate nutrition is essential for optimal enzyme function.
  • 6. Phase I Introduction of functional group Hydrophilicity increases slightly May inactivate or activate original compound major player is CYP or mixed function oxygenase (MFO) system in conjunction with NAD(P)H Location of reactions is smooth endoplasmic reticulum
  • 7. Sites of biotransformation Primary site: Liver  Rich in enzymes which Acts on endogenous and exogenous compounds Extrahepatic metabolism sites; Intestinal wall Sulfate conjugation Esterase and lipases - important in prodrug metabolism Lungs, kidney, placenta, brain, skin, adrenal glands
  • 8. Phase I- Biotransformation Activation Biotransformation Activation of xenobiotics is a key element (e.g. benzene, vinyl chloride) – Reactive intermediates include epoxides and free radical species (unpaired electrons) that are short-lived and hence highly reactive Protection is provided by endogenous antioxidant substances, e.g. GSH vitamins C and E antioxidant enzymes, SOD, GPX, CAT in coupled reactions Antioxidant molecules are oxidized in the process but have the capacity to regenerate the reduced form from the oxidized - NAD(P)H is a key player
  • 9. Cytochrome P450 (CYP) Mixed Function Oxidases (MFO) Located in many tissues but highly in liver ER Human: 16 gene families CYP 1,2,3 perform drug metabolism >48 genes sequenced Key forms: CYP1A2, CYP2C9, CYP2C19, CYP2D6, CYP2E1, and CYP3A4 Highly inducible – AlcoholCYP2E1 Dioxin/PCBs CYP1A Barbiturates  Microsomal Mixed Function Oxidases (MFOs) Flavoprotein,  NADPH-monooxygenase Cytochrome P450  Non-cytochrome oxidizing enzymes.  Xanthine oxidase Alcohol/aldehyde dehydrogenase Cytochrome P450 (CYP) Mixed Function Oxidases (MFO) Phase I metabolizing enzymes
  • 10. Metabolic enzymes Drug metabolism Refers to enzyme-mediated biotransformations (detoxication) that alter the pharmacological activity of both endogenous and exogenous compounds. Examples
  • 11. Quizzes Describe hydrolysis process of esters and amides Organophosphates Epoxides Describe the reductions of Azo and Nitro compounds Elaborate on benezene transformation to leukemia causing metabolites
  • 12. Phase II Conjugation with endogenous molecules (GSH, glycine, cystein, glucuronic acid) Hydrophilicity increases substantially Neutralization of active metabolic intermediates Facilitation of elimination Location of reactions is cytoplasm Types of reactions
  • 13. PHASE II (CONJUGATION) OR CONJUGATIVE ENZYMES • Phase II conjugative enzymes metabolize drugs by attaching (conjugating) a more polar molecule to the original drug molecule to increase water solubility. • thereby permitting more rapid drug excretion. • This conjugation can occur following a phase I reaction involving the molecule, but prior metabolism is not required. • The phase II enzymes typically consist of multiple isoforms, analogous to the CYPs, but to date are less well defined. Glucourinic acid conjugation Acetylation glycine conjugation Sulfonation Methylation
  • 14. Glucourinic acid conjugation This is the most common. The active form of glucoronic acid is UDP-glucoronic acid in uronic acid pathway. UDP-glucuronyltransferasesare the enzymes which participate in glucuronide formation. It occurs with compounds containing hydroxyl , carbonyl, sulfhydryl or amino groups. Strongly acidic compounds which are more soluble in water are produced – hence more easily excreted.
  • 15. Glycine conjugation Aromatic carboxylic acids are conjugated with glycine. When benzoyl CoA is conjugated with glycine, hippuric acid is formed.
  • 16. Sulfonation • The active form 3’-phosphoadenosine 5- phosphosulfate(PAPS) participates in conjugation. • Enzyme sulfotransferase in involved. • Aliphatic & aromatic compounds undergo sulfation.
  • 17. Methylation Methyl group of S-adenosylmethionine is used to methylate many compounds. Enzyme methyl transferase is used.
  • 18. Acetylation Acetyl CoA is the active form . Drugs like sulfanilamide are converted to acetyl derivatives.