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Multiscale modelling and
decision support applied to
breast cancer
management
Overview of DESIREE
european H2020 project
Dr. Iván Macía
Project Coordinator
Vicomtech -K4
imacia@vicomtech.org
Index
1.Project Data
2.Background
3.Response to the Challenge
4.DESIREE Concept
5.Expected Results
Decision Support and Information System for
Breast Cancer
• Call: H2020-PHC-2015-single-stage
• Topic: PHC-30 (Personalizing Health and Care) - Digital
Representation of Health Data to Improve Disease Diagnosis and
Treatment
• Budget: 3.340.720€
1. PROJECT DATA
Why Breast cancer?
• High incidence and mortality (PBC)
• Complex clinical situation
• Great amount of heterogeneous data
2. BACKGROUND
Imaging
Genetics
Therapeutic
Biology
Diagnostic
Tests
Environmental
& Risk Factors
RT Plans
Personal &
Clinical
Patient-specificData
Clinical
Guidelines
Trials & Studies
Public DBs
Therapeutic
Admin. Data
ExternalData
• Experience of the consortium in:
• Models on effects of radiotherapy and
adjuvant therapy
• Models on breast conservative
therapy + healing
• Information / DSS systems for breast
cancer to be used by breast units
• DSS technology and how to model
experience
• Image analysis and visualization and
genomic data analysis
Main Idea
DESIREE is
• a web-based software ecosystem (i.e. a group of related tools)
• for personalized, collaborative and multidisciplinary case management and
decision support of clinicians in breast units (BUs)
• mainly for primary breast cancer (PBC)
Decision Support System
• Provides timely information and evidence for case management and decision
• Information for decision and advice may come in different forms:
- Integrated intuitive view of the patient data
- Decisional rules from experience and evidence / alarms
- Visual exploratory interfaces
- Comparison with previous cases
- Computational predictive modeling
- Exploitation of unstructured digital information sources (diagnostic, prognostic)
3. RESPONSE TO THE CHALLENGE
Objectives
• Improve the coordination and multidisciplinary management of
breast cancer cases in Bus
• BU professionals have a limited amount of time to review cases based
on a large amount of heterogeneous information
• Supported by a novel Digital Breast Cancer Patient model
• Exploit novel sources of information (genetic, lifestyle) and the
rich information contained in routine imaging examinations
• Develop and assess the value of prognostic imaging biomarkers and
other digital information sources available
• Develop tools for the visual assessment of the possible aesthetic
outcome of Breast Conservative Therapy
• Driving computational multiscale predictive modeling tools into clinical
practice for informed decision support
• Provide decision support for the diversity of therapeutic options
available in PBC
• Overcome the limitations of DSS based only on guidelines
• Provide the ability to explore and learn from previous experience
3. RESPONSE TO THE CHALLENGE
Core components
3. RESPONSE TO THE CHALLENGE
•Based on a digital breast cancer patient (DBCP)
•Capable of modelling experience
•On the basis of a set of evolving rules based on outcomes
•Providing visual exploratory interfaces
Decision Support
System for BUs
•Assess the prognostic value of certain modalities such as
mammo, DBT or MRI
•Develop prognostic imaging biomarkers of tumor
appearance (MRI) and breast density (mammo, DBT)
•Exploiting genetic information (Genesystems)
Exploitation of Novel
Digital Information
Sources
•Based on a physiological multi-scale model of breast
conservative therapy
•With predictive capacity of aesthetic outcome
•Incorporating effects at the cellular level of external stimuli
(healing, radiotherapy, chemotherapy)
Physiological
Predictive
Modelling
Work Package Overview 3. RESPONSE TO THE CHALLENGE
WP2 EXPLORE
Clinical guidelines and
protocols
Digital Breast Cancer
Patient Model
Data source
information
WP4 MODEL
WP3 ANALYSE
DM and DBT breast characterisation
MRI breast tissue characterisation
MRI tumour tissue characterisation
Cloud-based
implementation
Radiobiological and healing model
BCT multi-scale model
Virtual
lumpectomy
solution
WP5 DECIDE
Knowledge and clinical guidelines model
Decision recommendation generation
reasoning engine
Decision model engine
Experience model
Packaging and
interfaces
WP6 INTEGRATE
Requirements and
system architecture
System integration,
deployment, verification and
security
Databases and
graphical user
interfaces
Visual analytics and
web-based imaging
interfaces
WP7 VALIDATE
DESIREE validation
protocol
Clinical validation
Test and technical
validation
DESIREE vision:
• Integrated holistic
information system
and patient model
• Experience modelling
• Exploitation of
retrospective cases
• Evolving knowledge
model
• Added value of
imaging
• New predictive
computational models
• DSS providing specific
timely advice
4. DESIREE CONCEPTDESIREE DSS Concept
Impact Seek
• In terms of technology
• Push forward technologies into clinical practice (increase
TRLs)
• Fully functional, web-based DSS, imaging and modelling tools
• In terms of clinical practice
• New insight that may end up in new research, studies or trials
• Technologies applied into clinical practice at the end of the
project:
- Predictive modelling of BCT: this might be the hardest as it has the
lowest TRL. Demonstrate that is a valuable tool and to which extent
- Prognostic imaging biomarkers: demonstrate utility and provide tools
to measure them
- DSS for Breat Unit: having the DSS working in the Breast Unit is of
paramount importance
5. EXPECTED RESULTS
Thank you for
your attention
imacia@vicomtech.org
desiree-contact@vicomtech.org

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1 desiree symposium_project_overview_final

  • 1. Multiscale modelling and decision support applied to breast cancer management Overview of DESIREE european H2020 project Dr. Iván Macía Project Coordinator Vicomtech -K4 imacia@vicomtech.org
  • 2. Index 1.Project Data 2.Background 3.Response to the Challenge 4.DESIREE Concept 5.Expected Results
  • 3. Decision Support and Information System for Breast Cancer • Call: H2020-PHC-2015-single-stage • Topic: PHC-30 (Personalizing Health and Care) - Digital Representation of Health Data to Improve Disease Diagnosis and Treatment • Budget: 3.340.720€ 1. PROJECT DATA
  • 4. Why Breast cancer? • High incidence and mortality (PBC) • Complex clinical situation • Great amount of heterogeneous data 2. BACKGROUND Imaging Genetics Therapeutic Biology Diagnostic Tests Environmental & Risk Factors RT Plans Personal & Clinical Patient-specificData Clinical Guidelines Trials & Studies Public DBs Therapeutic Admin. Data ExternalData • Experience of the consortium in: • Models on effects of radiotherapy and adjuvant therapy • Models on breast conservative therapy + healing • Information / DSS systems for breast cancer to be used by breast units • DSS technology and how to model experience • Image analysis and visualization and genomic data analysis
  • 5. Main Idea DESIREE is • a web-based software ecosystem (i.e. a group of related tools) • for personalized, collaborative and multidisciplinary case management and decision support of clinicians in breast units (BUs) • mainly for primary breast cancer (PBC) Decision Support System • Provides timely information and evidence for case management and decision • Information for decision and advice may come in different forms: - Integrated intuitive view of the patient data - Decisional rules from experience and evidence / alarms - Visual exploratory interfaces - Comparison with previous cases - Computational predictive modeling - Exploitation of unstructured digital information sources (diagnostic, prognostic) 3. RESPONSE TO THE CHALLENGE
  • 6. Objectives • Improve the coordination and multidisciplinary management of breast cancer cases in Bus • BU professionals have a limited amount of time to review cases based on a large amount of heterogeneous information • Supported by a novel Digital Breast Cancer Patient model • Exploit novel sources of information (genetic, lifestyle) and the rich information contained in routine imaging examinations • Develop and assess the value of prognostic imaging biomarkers and other digital information sources available • Develop tools for the visual assessment of the possible aesthetic outcome of Breast Conservative Therapy • Driving computational multiscale predictive modeling tools into clinical practice for informed decision support • Provide decision support for the diversity of therapeutic options available in PBC • Overcome the limitations of DSS based only on guidelines • Provide the ability to explore and learn from previous experience 3. RESPONSE TO THE CHALLENGE
  • 7. Core components 3. RESPONSE TO THE CHALLENGE •Based on a digital breast cancer patient (DBCP) •Capable of modelling experience •On the basis of a set of evolving rules based on outcomes •Providing visual exploratory interfaces Decision Support System for BUs •Assess the prognostic value of certain modalities such as mammo, DBT or MRI •Develop prognostic imaging biomarkers of tumor appearance (MRI) and breast density (mammo, DBT) •Exploiting genetic information (Genesystems) Exploitation of Novel Digital Information Sources •Based on a physiological multi-scale model of breast conservative therapy •With predictive capacity of aesthetic outcome •Incorporating effects at the cellular level of external stimuli (healing, radiotherapy, chemotherapy) Physiological Predictive Modelling
  • 8. Work Package Overview 3. RESPONSE TO THE CHALLENGE WP2 EXPLORE Clinical guidelines and protocols Digital Breast Cancer Patient Model Data source information WP4 MODEL WP3 ANALYSE DM and DBT breast characterisation MRI breast tissue characterisation MRI tumour tissue characterisation Cloud-based implementation Radiobiological and healing model BCT multi-scale model Virtual lumpectomy solution WP5 DECIDE Knowledge and clinical guidelines model Decision recommendation generation reasoning engine Decision model engine Experience model Packaging and interfaces WP6 INTEGRATE Requirements and system architecture System integration, deployment, verification and security Databases and graphical user interfaces Visual analytics and web-based imaging interfaces WP7 VALIDATE DESIREE validation protocol Clinical validation Test and technical validation
  • 9. DESIREE vision: • Integrated holistic information system and patient model • Experience modelling • Exploitation of retrospective cases • Evolving knowledge model • Added value of imaging • New predictive computational models • DSS providing specific timely advice 4. DESIREE CONCEPTDESIREE DSS Concept
  • 10. Impact Seek • In terms of technology • Push forward technologies into clinical practice (increase TRLs) • Fully functional, web-based DSS, imaging and modelling tools • In terms of clinical practice • New insight that may end up in new research, studies or trials • Technologies applied into clinical practice at the end of the project: - Predictive modelling of BCT: this might be the hardest as it has the lowest TRL. Demonstrate that is a valuable tool and to which extent - Prognostic imaging biomarkers: demonstrate utility and provide tools to measure them - DSS for Breat Unit: having the DSS working in the Breast Unit is of paramount importance 5. EXPECTED RESULTS
  • 11. Thank you for your attention imacia@vicomtech.org desiree-contact@vicomtech.org