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Handling
NetCDF files
http://tinyurl.com/LearningR-NetCDF
José Roberto Motta Garcia
garcia.cptec@gmail.comDec-16
Leaning
José Roberto M. Garcia Dec-16Handling NetCDF files
NetCDF file
• Network Common Data Form
• Stores data in matrix format (grid), e.g., climate data
• Self-documented → metadata inside
• Portable
• Created by Unidata http://www.unidata.ucar.edu/software/netcdf/ (UCAR)
• Handling NetCDF with R → RNetCDF package
Visualizing NetCDF via sfw
http://www.giss.nasa.gov/tools/panoply/
Visualizing NetCDF via R
José Roberto M. Garcia Dec-16Handling NetCDF files
Reading NetCDF file
# of dimensions, e.g., lon, lat, time, ...
# of variables, e.g., lon, lat, time, temp, ...
# of global attributes, e.g., title, source, ...
# ID of the unlimited dimension or NA
José Roberto M. Garcia Dec-16Handling NetCDF files
More on NetCDF info
variable's attributes
José Roberto M. Garcia Dec-16Handling NetCDF files
NetCDF variable content
It's a monthly dataset,
so there are 12
months!
José Roberto M. Garcia Dec-16Handling NetCDF files
Reading variables and attributes
José Roberto M. Garcia Dec-16Handling NetCDF files
Plotting data
José Roberto M. Garcia Dec-16Handling NetCDF files
Creating attributes
Defines global
attributes
Defines attributes of
existing variables

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Learning R - Handling NetCDF files

  • 1. Handling NetCDF files http://tinyurl.com/LearningR-NetCDF José Roberto Motta Garcia garcia.cptec@gmail.comDec-16 Leaning
  • 2. José Roberto M. Garcia Dec-16Handling NetCDF files NetCDF file • Network Common Data Form • Stores data in matrix format (grid), e.g., climate data • Self-documented → metadata inside • Portable • Created by Unidata http://www.unidata.ucar.edu/software/netcdf/ (UCAR) • Handling NetCDF with R → RNetCDF package Visualizing NetCDF via sfw http://www.giss.nasa.gov/tools/panoply/ Visualizing NetCDF via R
  • 3. José Roberto M. Garcia Dec-16Handling NetCDF files Reading NetCDF file # of dimensions, e.g., lon, lat, time, ... # of variables, e.g., lon, lat, time, temp, ... # of global attributes, e.g., title, source, ... # ID of the unlimited dimension or NA
  • 4. José Roberto M. Garcia Dec-16Handling NetCDF files More on NetCDF info variable's attributes
  • 5. José Roberto M. Garcia Dec-16Handling NetCDF files NetCDF variable content It's a monthly dataset, so there are 12 months!
  • 6. José Roberto M. Garcia Dec-16Handling NetCDF files Reading variables and attributes
  • 7. José Roberto M. Garcia Dec-16Handling NetCDF files Plotting data
  • 8. José Roberto M. Garcia Dec-16Handling NetCDF files Creating attributes Defines global attributes Defines attributes of existing variables