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(ATS03-DEV05) Coding up Pipeline
       Pilot Components
                                   Mike Peeler
                          Senior Director, R&D
                 michael.peeler@accelrys.com
The information on the roadmap and future software development efforts are
intended to outline general product direction and should not be relied on in making
a purchasing decision.
Agenda

•   Component intro
•   Why code a new component?
•   Component model
•   Component categories
•   Component APIs
Pipeline Pilot Integration Points
                                                                                                     Client Integration
                                                                                                     Build clients that connect to Pipeline Pilot
                                                                                                     and run protocol services.
                                                       Web Browser
                          Run Protocol                                                      .NET Client               Java Client
  Professional                                                       JavaScript Client
                         Command Line         Web Port                                                                                SOAP Client    HTTP Client
     Client
                             Client
                                                                                            .NET Client
                                                      JavaScript Client SDK                                         Java Client SDK
                                                                                               SDK
                                                      Pipeline Pilot Enterprise Server

                 Web Apps                     Web Services API                           Admin Portal                                  Help Portal
                                                            Protocol Runtime Environment

  VB Script        VB Script
                                   Run                                                                SOAP &              Telnet /                   ODBC /
    (On               (On                   Java            Perl           Python        .NET                                         SSH / SCP
                                 Program                                                               HTTP                 FTP                       JDBC
   Client)          Server)


                                   Java      Perl           .NET
  VB Script        Cmd Line
                                  Classes   Scripts        Classes



Server Integration                                                                                         REST             SOAP
                                                                                                                                       Cmd Line
Extend pipelines with new                                                                                 Service          Service                     DBs

components that integrate
your code, data and services.
What is a component?

• A Pipeline Pilot component is a unit of useful functionality
  that can be built into a Pipeline Pilot protocol.
• Re-usability is the key for level of granularity.
More about components

• A component is displayed with a representational icon and any
  combination of the 3 standard ports.
• It has zero, one or more parameters, organized for usability,
  whose settings are used to modify run time behavior.
• A component and its parameters are self documenting.
Why ‘code’ a new component?
• First see if a non-coding approach will work
   – Specialization
   – PilotScript
   – Subprotocols
• Scripting languages
   – Perl, Python, VBScript, Dynamic Java + Dynamic .NET
   – R, as a more custom example
• Compiled
   – Java
   – .NET
• Integration Driver
Component model (State Machine)
Protocol event triggers:
•   onInitialize(context)                                 Context
•   onProcess (context, data)
                                                           Data
                                                  Access to:
•   onFinalize (context)
                                               Access to: data
                                                  o Global
                                               o Data record content
                                                  o Parameters
                           Data             Component State       CS
                                               o Port routingFactories
                                                  o Utilities,
            I              Record           •   Ready For Input Data
                                            •   Ready for New Data
Protocol         CS          onInitialize   •   Ready For Input Then New Data
Fires                                       •   Done Processing Data
Events
            P
                                            • How the component
                CS             onProcess      notifies the protocol what it
                                              is expecting next: input
                                              port record or a new data
            F                                 record.
                              onFinalize
Demo
 • Event Handling in component code
Component categories

•   Components generally fall into one of a number of roles e.g. Reader, Filter, Calculator, Viewer, Merger.
•   Within a category, there is a specific use pattern for component state and data record processing. E.G.
           Reader                               Calculator                          Merger/Sorter




                                                                                  ReadyForInputData
     ReadyForNewData                         ReadyForInputData                    …
     ReadyForNewData                         ReadyForInputData                    ReadyForInputData
     …                                       …                                    ReadyForNewData
     ReadyForNewData                         ReadyForInputData                    …
     DoneProcessingData                                                           ReadyForNewData
                                                                                  DoneProcessing



         There are conventions for naming and parameterization for each component
         category, described in the Component Development Guide.
Component APIs

• Similarities and differences
   – Java, .NET, Perl, Python
   – API Documentation
      • Where to find it
• Debugging
• Object model
   – See next slide
Object Model
                     1                                           Global Data       1
 Data Record                                                                             Context
               Data Root                                                                 1

                                                                                       Parameters




                     1            1
                                          1   1                                1
                           Node                   Property Collection
                             1        *                     1


                                                            *
                                                      Property
                                                     Name: string
                                                            1

                                                             1

                                                        Value
Summary
• Multiple ways to build components
• Most advanced approach is to code your own
   – Specialized integration components for various language options
• Component interface
   – Context, Data Record, Ports
   – Object models
   – Manage component state for the behavior you need
• Developers Tab in Pipeline Pilot Help Center
   – Server-side Integration/Language-based Integration
   – Development Guides/*
The information on the roadmap and future software development efforts are
intended to outline general product direction and should not be relied on in making
a purchasing decision.



For more information on the Accelrys Tech Summits and other IT & Developer
information, please visit:
https://community.accelrys.com/groups/it-dev

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(ATS3-DEV05) Coding up Pipeline Pilot Components

  • 1. (ATS03-DEV05) Coding up Pipeline Pilot Components Mike Peeler Senior Director, R&D michael.peeler@accelrys.com
  • 2. The information on the roadmap and future software development efforts are intended to outline general product direction and should not be relied on in making a purchasing decision.
  • 3. Agenda • Component intro • Why code a new component? • Component model • Component categories • Component APIs
  • 4. Pipeline Pilot Integration Points Client Integration Build clients that connect to Pipeline Pilot and run protocol services. Web Browser Run Protocol .NET Client Java Client Professional JavaScript Client Command Line Web Port SOAP Client HTTP Client Client Client .NET Client JavaScript Client SDK Java Client SDK SDK Pipeline Pilot Enterprise Server Web Apps Web Services API Admin Portal Help Portal Protocol Runtime Environment VB Script VB Script Run SOAP & Telnet / ODBC / (On (On Java Perl Python .NET SSH / SCP Program HTTP FTP JDBC Client) Server) Java Perl .NET VB Script Cmd Line Classes Scripts Classes Server Integration REST SOAP Cmd Line Extend pipelines with new Service Service DBs components that integrate your code, data and services.
  • 5. What is a component? • A Pipeline Pilot component is a unit of useful functionality that can be built into a Pipeline Pilot protocol. • Re-usability is the key for level of granularity.
  • 6. More about components • A component is displayed with a representational icon and any combination of the 3 standard ports. • It has zero, one or more parameters, organized for usability, whose settings are used to modify run time behavior. • A component and its parameters are self documenting.
  • 7. Why ‘code’ a new component? • First see if a non-coding approach will work – Specialization – PilotScript – Subprotocols • Scripting languages – Perl, Python, VBScript, Dynamic Java + Dynamic .NET – R, as a more custom example • Compiled – Java – .NET • Integration Driver
  • 8. Component model (State Machine) Protocol event triggers: • onInitialize(context) Context • onProcess (context, data) Data Access to: • onFinalize (context) Access to: data o Global o Data record content o Parameters Data Component State CS o Port routingFactories o Utilities, I Record • Ready For Input Data • Ready for New Data Protocol CS onInitialize • Ready For Input Then New Data Fires • Done Processing Data Events P • How the component CS onProcess notifies the protocol what it is expecting next: input port record or a new data F record. onFinalize
  • 9. Demo • Event Handling in component code
  • 10. Component categories • Components generally fall into one of a number of roles e.g. Reader, Filter, Calculator, Viewer, Merger. • Within a category, there is a specific use pattern for component state and data record processing. E.G. Reader Calculator Merger/Sorter ReadyForInputData ReadyForNewData ReadyForInputData … ReadyForNewData ReadyForInputData ReadyForInputData … … ReadyForNewData ReadyForNewData ReadyForInputData … DoneProcessingData ReadyForNewData DoneProcessing There are conventions for naming and parameterization for each component category, described in the Component Development Guide.
  • 11. Component APIs • Similarities and differences – Java, .NET, Perl, Python – API Documentation • Where to find it • Debugging • Object model – See next slide
  • 12. Object Model 1 Global Data 1 Data Record Context Data Root 1 Parameters 1 1 1 1 1 Node Property Collection 1 * 1 * Property Name: string 1 1 Value
  • 13. Summary • Multiple ways to build components • Most advanced approach is to code your own – Specialized integration components for various language options • Component interface – Context, Data Record, Ports – Object models – Manage component state for the behavior you need • Developers Tab in Pipeline Pilot Help Center – Server-side Integration/Language-based Integration – Development Guides/*
  • 14. The information on the roadmap and future software development efforts are intended to outline general product direction and should not be relied on in making a purchasing decision. For more information on the Accelrys Tech Summits and other IT & Developer information, please visit: https://community.accelrys.com/groups/it-dev