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Structured-Classification-of-PseudoUridine.pptx
The document provides a detailed classification of pseudouridine and related molecular entities, including definitions and formulas for various compounds such as c-glycosyl pyrimidines and methylpseudouridine derivatives. It outlines the structural distinctions and functional relationships of these compounds in the context of organic chemistry. Additionally, the document includes contact information and organizational details related to the classification of these chemical entities.
Structured-Classification-of-PseudoUridine.pptx
- 1. Structured Classification of PseudoUridine International: 1-631-504-6093 US& Canada (Toll free): 1-844-BOC(262)-0123 Email: info@bocsci.com Fax: 1-631-614-7828 45-16 Ramsey Road, Shirley, NY 11967, USA https://nucleotech.bocsci.com
- 2. Name Definition Chemical entityA physical entity of interest in chemistry, including molecular entities, parts thereof, and chemical substances Molecular entity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer, etc.; identifiable as a separately distinguishable entity Main group molecular entity A molecular entity contains one or more atoms from groups 1, 2, 13, 14, 15, 16, 17, and 18 of the periodic table P-block molecular entity A main group molecular entity contains one or more atoms of a p-block element Carbon group molecular entity A p-block molecular entity Organ molecular entity Any molecular entity that contains carbon Heteroorganic entity An organic molecular entity in which carbon atoms or organic groups are bonded directly to one or more heteroatoms Organochalcogen compound A compound containing at least one carbon-chalcogen bond Chalcogen molecular entity Any p-block molecular entity containing a chalcogen Oxygen molecular entity A chalcogen molecular entity Organooxygen compound A compound contains at least one carbon-oxygen bond Carbohydrate and carbohydrate derivative Any organooxygen compounds in the form of polyhydroxy-aldehyde or -ketone and/or compound derivatives; carbohydrates contain only carbon, hydrogen, and oxygen and usually have an empirical formula Cm(H2O)n; carbohydrate derivatives may include other elements by substitution or condensation Carbohydrate derivative Any organooxygen compound derived from carbohydrate by replacement of one or more hydroxy groups by an amino group, a thiol group, or similar heteroatomic groups Glycosyl compound A carbohydrate derivative that arises formally from the elimination of water from a glycosidic hydroxy group and an H atom bound to an oxygen, carbon, nitrogen, or sulfur atom of a separate entity C-glycosyl compound A glycosyl compound that arises formally from the elimination of water from a glycosidic hydroxy group and an H atom bound to a carbon atom, thus creating a C-C bond C-nucleoside A C-glycosyl compound C-glycosyl pyrimidine A C-nucleoside PseudoUridine A C-glycosyl pyrimidine that consists of uracil having a β-D-ribofuranosyl residue attached at 5’-position; the C- glycosyl isomer of the nucleoside uridine Graph View chemical entity molecular entity main group molecular entity carbon group molecular entity organic molecular entity p-block molecular entity heteroorganic entity chalcogen molecular entity organooxygen compound oxygen molecular entity carbohydrates and carbohydrate derivatives carbohydrate derivative glycosyl compound C-glycosyl compound C-nucleoside C-glycosyl pyrimidine pseudoUridines methylpseudoUridin e pseudoUridine organochalcogen compound
- 3. Classification of PseudoUridine pseudoUridinemethylpseudoUridine pseudoUridines 1- methylpseudoUridine 2'-O- methylpseudoUridine pseudoUridine 5'-phosphate N(1)- methylpseudoUridine 5'- monophosphate N(3)-methylpseudoUridine 5'-monophosphate
- 4. N(3)-methylpseudoUridine 5'- monophosphate PseudoUridine N(3)-methylpseudoUridine 5'- monophosphateis a C-nucleoside phosphate that is pseudoUridine 5'- monophosphate, bearing an additional N(3)-methyl substituent. It is functionally related to a pseudoUridine. Molecular Formula: C10H15N2O9P Molecular Weight: 338.21 N(1)-methylpseudoUridine 5'- monophosphate N(1)-methylpseudoUridine 5'- monophosphate is a C-nucleoside phosphate consisting of N(1)- methylpseudoUridine substituted at the 5'-position by a monophosphate group. It is functionally related to a pseudoUridine. Molecular Formula: C10H15N2O9P Molecular Weight: 338.21 PseudoUridine 5'- phosphate PseudoUridine 5'-phosphate is a C- nucleoside phosphate consisting of pseudoUridine and a monophosphate group at the 5'- position. It is functionally related to a pseudoUridine and is a conjugate acid of pseudoUridine 5'- phosphate(2-). Molecular Formula: C9H13N2O9P Molecular Weight: 324.18 MethylpseudoUridine 1-methylpseudoUridine is a methylpseudoUridine in which the methyl group is located at position N-1 on the uracil ring. Molecular Formula: C10H14N2O6 Molecular Weight: 258.23 1- methylpseudoUridine 2'-O-methylpseudoUridine 2'-O-methylpseudoUridine is a methylpseudoUridine in which the methyl group is located at position O-2' on the ribose ring. Molecular Formula: C10H14N2O6 Molecular Weight: 258.23