Pedro R. Romero Data	Scientist	-	Life	Scientist	-	Computational	Scientist	
1946	Wallinford	Cir,	Sun	Prairie,	WI	53590	|	pedro.romero.phd@gmail.com	|	(608)	237-1475	
Qualifications
and Skills
•Internet	and	WWW:	Using	computers	since	1976;	WWW	experience	
since	1994;	Web	design	experience	from	early	HTML	to	WordPress.	
•Data	Science:	Ample	research	experience	in	machine	learning	(ML)	and	
data	analysis	on	large,	noisy	datasets,	plus	teaching	graduate	level	
machine	learning	for	5	years.	Familiarity	with	TensorFlow.	
• Computational	Biology:	Molecular	biology,	biochemistry,	biophysics,	
genomics,	protein	structure,	sequence	and	pathway	analysis,	cancer.	
• Programming:	Fluent	in	C/C++,	Objective	C,	Swift,	Perl,	Python,	Lisp.		
• Math/Stats:	Experience	with	R,	Partek,	Matlab,	WEKA.	
• Operating	systems:	Windows,	Mac	OS	X,	and	Unix-Linux-Solaris.	
• Databases:	Experience	with	relational	(SQL)	and	Object-oriented	DBMS	
and	biological	DBs	in	general.	Familiarity	with	NoSQL.	
• High-performance	computing:	Familiarity	with	Hadoop,	MapReduce,	
Spark.	
• Communication	skills:	Strong	oral	(15+	talks	and	lectures)	and	written	
(40+	peer	reviewed	publications	with	11,000+	total	citations	and	2	Book	
chapters).	Bilingual	(English-Spanish)	
•Management:	Industry:	Project	and	Research	Manager;	Academia:	
Research	Co-PI	and	Program	Director,	Faculty	President,	Resource	
Director,	Conference	session	chair,	Editorial	Boards.	
Profesional
Experience
•DIRECTOR,	BIOLOGICAL	MAGNETIC	RESONANCE	BANK	–	UNIVERSITY	OF	WISCONSIN	
MADISON:	Directs	an	important	database	resource	for	molecular	biology.	
•ASSOCIATE	SCIENTIST	–	UNIVERSITY	OF	WISCONSIN	MADISON:	Working	in	an	
industry	setting,	developed	a	machine	learning	approach	for	predicting	
drug	toxicity	from	protein	structure.		
• VISITING	SCIENTIST,	ASSISTANT	PROFESSOR	–	INDIANA	UNIVERSITY	–	PURDUE	
UNIVERSITY	INDIANAPOLIS:	Many	data	analysis-based	breakthroughs	in	
protein	intrinsic	disorder,	a	new	field	in	molecular	biology	co-founded	as	
a	doctoral	student	after	developing	the	first	ML	predictor	of	structural	
disorder,	with	applications	in	biomedicine	and	drug	discovery.	
• POSTDOCTORAL	FELLOW	–	SRI	INTERNATIONAL:		Developed	7	object-oriented	
Pathway-Genome	Databases	(PGDBs),	including	HumanCyc	the	first	
genome-based	human	metabolic	network	database.	Co-developed	a	
patented	computable	logic	representation	of	metabolic	networks.	
Added	functionality	to,	and	ported	to	Windows,	the	Pathway	Tools	
software	suite	in	a	professional	software	engineering	setting.	Also,	
developed	an	ML	predictor	of	transcription	units	on	PGDBs.
• SCIENTIFIC	CONSULTANT		–	MOLECULAR	KINETICS:	Advised	on	research	leading	
to	a	preliminary	patent	for	a	genome-wide	drug	target	search	tool.	
• SCIENTIFIC	CONSULTANT		–	SINGULARITY	INC.:	Advisor	on	data	analysis	
applications	on	biomedical	data.	
• SCIENTIFIC	CONSULTANT	–	PURDUE	UNIVERSITY	CHEMICAL	ENGINEERING:	Advisor	
on	machine	learning	for	drug	discovery.	
• PROJECT	MANAGER/RESEARCHER	–	DESARROLLO	EMPRESARIAL:	Management	
training,	consulting	and	research.	Co-authored	a	major	study	on	global	
management	trends	for	PDVSA	(Venezuelan	Oil	Industry).		
Education
•Postdoctoral,	Computational	Biology,	SRI	International,	2003	
•Ph.D.	Computer	Science,	Washington	State	University,	1999.	
• M.S.E.	Chemical	&	Biochemical	Engineering,	University	of	Pennsylvania.	
1984.	
•Chemical	Engineer:	Universidad	Simon	Bolivar,	Caracas,	Venezuela,	
1981.	
	
Languages
•English		
•Spanish

Pedro Romero Resume 2017vXweb

  • 1.
    Pedro R. RomeroData Scientist - Life Scientist - Computational Scientist 1946 Wallinford Cir, Sun Prairie, WI 53590 | pedro.romero.phd@gmail.com | (608) 237-1475 Qualifications and Skills •Internet and WWW: Using computers since 1976; WWW experience since 1994; Web design experience from early HTML to WordPress. •Data Science: Ample research experience in machine learning (ML) and data analysis on large, noisy datasets, plus teaching graduate level machine learning for 5 years. Familiarity with TensorFlow. • Computational Biology: Molecular biology, biochemistry, biophysics, genomics, protein structure, sequence and pathway analysis, cancer. • Programming: Fluent in C/C++, Objective C, Swift, Perl, Python, Lisp. • Math/Stats: Experience with R, Partek, Matlab, WEKA. • Operating systems: Windows, Mac OS X, and Unix-Linux-Solaris. • Databases: Experience with relational (SQL) and Object-oriented DBMS and biological DBs in general. Familiarity with NoSQL. • High-performance computing: Familiarity with Hadoop, MapReduce, Spark. • Communication skills: Strong oral (15+ talks and lectures) and written (40+ peer reviewed publications with 11,000+ total citations and 2 Book chapters). Bilingual (English-Spanish) •Management: Industry: Project and Research Manager; Academia: Research Co-PI and Program Director, Faculty President, Resource Director, Conference session chair, Editorial Boards. Profesional Experience •DIRECTOR, BIOLOGICAL MAGNETIC RESONANCE BANK – UNIVERSITY OF WISCONSIN MADISON: Directs an important database resource for molecular biology. •ASSOCIATE SCIENTIST – UNIVERSITY OF WISCONSIN MADISON: Working in an industry setting, developed a machine learning approach for predicting drug toxicity from protein structure. • VISITING SCIENTIST, ASSISTANT PROFESSOR – INDIANA UNIVERSITY – PURDUE UNIVERSITY INDIANAPOLIS: Many data analysis-based breakthroughs in protein intrinsic disorder, a new field in molecular biology co-founded as a doctoral student after developing the first ML predictor of structural disorder, with applications in biomedicine and drug discovery. • POSTDOCTORAL FELLOW – SRI INTERNATIONAL: Developed 7 object-oriented Pathway-Genome Databases (PGDBs), including HumanCyc the first genome-based human metabolic network database. Co-developed a patented computable logic representation of metabolic networks. Added functionality to, and ported to Windows, the Pathway Tools software suite in a professional software engineering setting. Also, developed an ML predictor of transcription units on PGDBs.
  • 2.
    • SCIENTIFIC CONSULTANT – MOLECULAR KINETICS: Advised on research leading to a preliminary patent for a genome-wide drug target search tool. • SCIENTIFIC CONSULTANT – SINGULARITY INC.: Advisor on data analysis applications on biomedical data. •SCIENTIFIC CONSULTANT – PURDUE UNIVERSITY CHEMICAL ENGINEERING: Advisor on machine learning for drug discovery. • PROJECT MANAGER/RESEARCHER – DESARROLLO EMPRESARIAL: Management training, consulting and research. Co-authored a major study on global management trends for PDVSA (Venezuelan Oil Industry). Education •Postdoctoral, Computational Biology, SRI International, 2003 •Ph.D. Computer Science, Washington State University, 1999. • M.S.E. Chemical & Biochemical Engineering, University of Pennsylvania. 1984. •Chemical Engineer: Universidad Simon Bolivar, Caracas, Venezuela, 1981. Languages •English •Spanish