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How the InChI chemical identifier
catalyzed a career in building
web-based chemistry tools
Antony Williams
Center for Computational Toxicology and Exposure
U.S. Environmental Protection Agency, RTP, NC
http://www.orcid.org/0000-0002-2668-4821
August 2022: ACS Chicago
The views expressed in this presentation are those of the author and do not necessarily reflect the views or policies of the U.S. EPA
My background…
• Work History to date (1988-2022)
– Government lab as postdoc (NRC-Canada)
– Academia as NMR Facility Manager (Ottawa University)
– Fortune 500 Company as NMR Tech Leader (Kodak)
– Small start-up company as product manager, marketing
manager, Chief Science Officer (ACD/Labs)
– Consultant – chemistry informatics industry
– Company owner – created ChemSpider (ChemZoo Inc)
– Royal Society of Chemistry (who bought ChemSpider)
– US-EPA – cheminformatician and “connector”
InChI first version: 2005
• Work History to date (1988-2022)
– Government lab as postdoc (NRC-Canada)
– Academia as NMR Facility Manager (Ottawa University)
– Fortune 500 Company as NMR Tech Leader (Kodak)
– Small start-up company as product manager, marketing
manager, Chief Science Officer (ACD/Labs) 1997-2007
– Consultant – chemistry informatics industry
– Company owner – created ChemSpider (ChemZoo Inc)
– Royal Society of Chemistry (who bought ChemSpider)
– US-EPA – cheminformatician and “connector”
Introduced InChI into ChemSketch
3
Full InChI support
4
ACD/ChemSketch InChI support
5
InChI in the hands of the masses
6
September 2005
June 2020
Concept of a Structure-Searchable Web
• December 2006: the promise of InChI to
“index the chemical web”
• March 2007: ChemSpider Unveiled.. HERE
7
ChemSpider March 2007
8
I still like the
old logo 
ACD/Labs and ChemSpider
Left July 2007
9
ChemSpider was BUILT on InChI
• InChI was pivotal for “linking the web”
• Simple linking to other resources – plus the
advantages of “skeleton searching”
10
The Path to Curation
• We used InChI to aggregate, collapse and
guide curation
11
We used InChi to help Wikipedia
12
We may be done finally….
13
I talk, a lot
14
I talk, a lot (some say too much)
15
I talk, a lot…about InChI
16
Joined US-EPA in May 2015
• 10 releases in 5 years…
17
We use InChI so many places…
• Primary search
• As an identifier and path to Google search
18
For our External Links
19
In our batch search
20
We spread InChIs to the world
• We provide download files of every list, of
the entire database, and every SDF, CSV
and Excel file with InChIs…
21
We have expanded the education..
• Every presentation about the Dashboard
explains the value and benefits of InChI
• We educate as many groups as possible
regarding the benefits of InChI including
– How to source isotopically labeled compounds
– Linking across stereospecific chemicals
– Crosslinking to other EPA websites
22
New Cheminformatics Modules
https://www.epa.gov/chemical-research/cheminformatics
23
The Impact of InChI:
Ten Years Revisit coming…
24
Thank you Igor Pletnev
• Igor Pletnev did more for me than InChI
• ACD/ChemBasic for ChemSketch
• Thank you to the InChI Trust, and Igor, for everything
25
Thank you
26

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How the InChI chemical identifier catalyzed a career in building web-based chemistry tools

  • 1. How the InChI chemical identifier catalyzed a career in building web-based chemistry tools Antony Williams Center for Computational Toxicology and Exposure U.S. Environmental Protection Agency, RTP, NC http://www.orcid.org/0000-0002-2668-4821 August 2022: ACS Chicago The views expressed in this presentation are those of the author and do not necessarily reflect the views or policies of the U.S. EPA
  • 2. My background… • Work History to date (1988-2022) – Government lab as postdoc (NRC-Canada) – Academia as NMR Facility Manager (Ottawa University) – Fortune 500 Company as NMR Tech Leader (Kodak) – Small start-up company as product manager, marketing manager, Chief Science Officer (ACD/Labs) – Consultant – chemistry informatics industry – Company owner – created ChemSpider (ChemZoo Inc) – Royal Society of Chemistry (who bought ChemSpider) – US-EPA – cheminformatician and “connector”
  • 3. InChI first version: 2005 • Work History to date (1988-2022) – Government lab as postdoc (NRC-Canada) – Academia as NMR Facility Manager (Ottawa University) – Fortune 500 Company as NMR Tech Leader (Kodak) – Small start-up company as product manager, marketing manager, Chief Science Officer (ACD/Labs) 1997-2007 – Consultant – chemistry informatics industry – Company owner – created ChemSpider (ChemZoo Inc) – Royal Society of Chemistry (who bought ChemSpider) – US-EPA – cheminformatician and “connector”
  • 4. Introduced InChI into ChemSketch 3
  • 7. InChI in the hands of the masses 6 September 2005 June 2020
  • 8. Concept of a Structure-Searchable Web • December 2006: the promise of InChI to “index the chemical web” • March 2007: ChemSpider Unveiled.. HERE 7
  • 9. ChemSpider March 2007 8 I still like the old logo 
  • 11. ChemSpider was BUILT on InChI • InChI was pivotal for “linking the web” • Simple linking to other resources – plus the advantages of “skeleton searching” 10
  • 12. The Path to Curation • We used InChI to aggregate, collapse and guide curation 11
  • 13. We used InChi to help Wikipedia 12
  • 14. We may be done finally…. 13
  • 15. I talk, a lot 14
  • 16. I talk, a lot (some say too much) 15
  • 17. I talk, a lot…about InChI 16
  • 18. Joined US-EPA in May 2015 • 10 releases in 5 years… 17
  • 19. We use InChI so many places… • Primary search • As an identifier and path to Google search 18
  • 20. For our External Links 19
  • 21. In our batch search 20
  • 22. We spread InChIs to the world • We provide download files of every list, of the entire database, and every SDF, CSV and Excel file with InChIs… 21
  • 23. We have expanded the education.. • Every presentation about the Dashboard explains the value and benefits of InChI • We educate as many groups as possible regarding the benefits of InChI including – How to source isotopically labeled compounds – Linking across stereospecific chemicals – Crosslinking to other EPA websites 22
  • 25. The Impact of InChI: Ten Years Revisit coming… 24
  • 26. Thank you Igor Pletnev • Igor Pletnev did more for me than InChI • ACD/ChemBasic for ChemSketch • Thank you to the InChI Trust, and Igor, for everything 25