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By
Romissaa Aly
Assistant lecturer of Oral
Medicine, Periodontology,
Diagnosis and Dental Radiology
(Al-Azhar Univerisity
Coronaviruses
Part (3)
Mouse Receptor
According to the Red Queen hypothesis,
hosts and pathogens are in an evolutionary
arms race to keep pace with each other for
fitness and survival (1, 2).
Coronaviruses are a large family of ancient and
diverse RNA virus pathogens that infect many
mammalian and avian species (3, 4).
Different coronaviruses use a variety of cell
surface receptors for entry into host cells through
the activities of virus-surface spike proteins (5, 6).
The host receptor-adapting evolution of
coronavirus spike proteins has been extensively
studied (3–6), but coronavirusdriven
evolution of host receptors is much less well
understood.
As the prototypic member of the
coronavirus family, mouse hepatitis
coronavirus (MHV)3 presents a good model
system for studying the co-evolutionary
relationship between viruses and hosts.
Depending on the strain, MHV can cause enteric,
respiratory, or brain infections in mice.
The enterotropic strains of MHV spread
widely in susceptible mouse populations and are
lethal in infant mice of many inbred strains (up to
100% fatality) (7).

Infection with MHV is a major concern in
laboratory mice because it can disrupt
mouse-based research through clinical disease
and/or alteration of immunologic responses (8).
MHV uses a cell-surface protein, mouse
carcinoembryonic antigen-related cell adhesion
molecule 1a (mCEACAM1a), as its host receptor (9,
10).
The CEACAM1 protein is widely expressed in all
mammals on the membranes of epithelial cells,
endothelial cells, and leukocytes (11).
It mediates cell-cell adhesion and signaling
and participates in the differentiation and
arrangement of tissue three-dimensional
structure, angiogenesis, apoptosis, tumor
suppression, cancer metastasis, and the modulation
of innate and adaptive immune responses (12).
The envelope-anchored MHV spike
glycoprotein specifically recognizes
mCEACAM1a through the N-terminal domain
of its S1 subunit (S1-NTD) (9, 13, 14).
 Previous Structural studies revealed that
coronavirus S1-NTDs have the same tertiary
structural fold as human galectins (galactose-
binding lectins), and that whereas MHV S1-NTD
recognizes mCEACAM1a, bovine coronavirus (BCoV) S1-
NTD recognizes sugar (15, 16).
Recent Study proposed that
coronaviruses acquired a host galectin
gene and inserted it into their spike protein gene,
and that whereas bovine coronavirus S1-NTD has
kept its original sugar-binding lectin activity,
MHV S1-NTD has evolved novel mCEACAM1a-
binding affinity and lost its original sugar-
binding lectin activity. These studies have provided
insight into the host receptor-adapting evolution of
coronaviruses (5, 6).
Other than their different MHV receptor activities,
mCEACAM1a and mCEACAM1b appear to be
functionally equivalent: neither 1a/1a mice
nor 1b/1b mice show any growth defects,
whereas a dysfunctional Ceacam1 gene leads to
impaired insulin clearance, abnormal weight gain,
and reduced fertility (22).
 Previous structural studies of mCEACAM1a
and its complex with MHV S1-NTD have
delineated detailed interactions between
mCEACAM1a and MHV S1-NTD (15, 23).

Moreover, previous studies identified the CC
loop (loop that connects –β strands C and C′)
in mCEACAM1a as critical for MHV binding;
the sequence of this loop diverges in
mCEACAM1b, partially accounting for the low
MHV receptor activity of mCEACAM1b (17, 24).
However, due to the lack of structural information
about mCEACAM1b, it was not known what
structural differences between mCEACAM1a
and mCEACAM1b or whether additional
residue differences between mCEACAM1a and
mCEACAM1b account for the
MHV resistance in mice homozygous for Ceacam1b.
In the recent study they have determined the
crystal structure of mCEACAM1b and
elucidated the structural differences and
additional residue differences between mCEACAM1a
and mCEACAM1b that impede the binding of MHV S1-
NTD to mCEACAM1b.
Moreover, they have performed structure-guided
mutagenesis studies onmCEACAM1a and
mCEACAM1bto investigate the significance of
their structural and sequence differences
upon their MHV receptor activities.
These results provide insight into the
possibility that MHV has driven the evolution
of the mCEACAM1 protein in mice.
Due to alternative mRNA splicing, mCEACAM1
contains either two [D1 and D4] or four [D1-D4] Ig-
like domains in tandem, in addition to a
transmembrane anchor and a short
intracellular tail at its C terminus (12).
mCEACAM1b[D1,D4] (residues 1–202)
without the membrane anchor or the
intracellular tail was expressed and purified as
previous described for mCEACAM1a[D1,D4] (15).
The overall structure of
mCEACAM1b[D1,D4] is similar to that of
mCEACAM1a[D1,D4], but the structural similarity
is uneven in different regions of the two proteins.
In both mCEACAM1a and mCEACAM1b, the
two Ig-like domains, D1 and D4, are arranged
in tandem without any significant
interactions with each other (Fig. 1, A and B).
In mCEACAM1a, the D1 domain binds to
MHVS1-NTD, whereas the D4 domain has
no contact with MHV S1-NTD (Fig. 1C).
In the D1 domain of mCEACAM1a, several
loops (CC′, C′C″″, CD, and FG) and -strands (βC,
βC′, and βC″) are directly involved in MHV binding,
and thus these regions have been called the virus-
binding motifs (VBMs) (Fig. 1, C and D).
 Interestingly, the D1 domains of
mCEACAM1a and mCEACAM1b are
significantly more divergent in both
primary structure (sequence identity 74%)
and tertiary structure (main chain r.m.s.d. 1.11
Ǻ)than the D4 domains (sequence identity 98%;
main chain r.m.s.d. 0.77Ǻ ‫إ‬( ) Fig. 2).
Further inspection of the structures of mCEACAM1a
and mCEACAM1b has identified detailed
structural divergence between the VBMs of the
two proteins.
 In mCEACAM1a, a critical CC′ loop (loop that
connects β-strands C and C′) in the D1 domain
interacts extensively with MHV S1-NTD and
thus plays a prominent role in the virus/receptor
binding interactions (Fig. 3A).
FIGURE 1. Overall structure of mouse CEACAM1b. A, crystal
structure of mCEACAM1b[D1,D4] containing the D1 and D4
domains. Secondary structures in
domain D1 of mCEACAM1b[D1,D4] are named after the
mCEACAM1a[D1,D4] structure (23).
B, crystal structure of mCEACAM1a[D1,D4] (PDB 1L67) (23).
VBMs
are in blue.
C, crystal structure of mCEACAM1a[D1,D4] complexed with
MHV S1-NTD (PDB 3R4D) (16).
MHV S1-NTD is in cyan, with receptor-binding motifs
(RBMs) in red. D, sequence alignment of mCEACAM1b[D1,D4] and
mCEACAM1a[D1,D4]. -strands are shown as arrows.
Virus binding motifs (VBMs )in mCEACAM1a and the
corresponding regions in mCEACAM1b are in blue. Asterisks indicate
positions that have fully conserved residues; colons indicate
positions that have strongly conserved residues; periods indicate
positions that have weakly conserved residues. The boundary
between domains D1 and D4 is indicated by a black line.
Sequence alignment was done using ClustalW (48). Structural
Coronavirus mouse receptors: part 3
Coronavirus mouse receptors: part 3
Coronavirus mouse receptors: part 3
Coronavirus mouse receptors: part 3
Coronavirus mouse receptors: part 3
Coronavirus mouse receptors: part 3
Coronavirus mouse receptors: part 3
Coronavirus mouse receptors: part 3

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Coronavirus mouse receptors: part 3

  • 1.
  • 2. By Romissaa Aly Assistant lecturer of Oral Medicine, Periodontology, Diagnosis and Dental Radiology (Al-Azhar Univerisity Coronaviruses Part (3) Mouse Receptor
  • 3. According to the Red Queen hypothesis, hosts and pathogens are in an evolutionary arms race to keep pace with each other for fitness and survival (1, 2).
  • 4. Coronaviruses are a large family of ancient and diverse RNA virus pathogens that infect many mammalian and avian species (3, 4). Different coronaviruses use a variety of cell surface receptors for entry into host cells through the activities of virus-surface spike proteins (5, 6).
  • 5. The host receptor-adapting evolution of coronavirus spike proteins has been extensively studied (3–6), but coronavirusdriven evolution of host receptors is much less well understood.
  • 6. As the prototypic member of the coronavirus family, mouse hepatitis coronavirus (MHV)3 presents a good model system for studying the co-evolutionary relationship between viruses and hosts.
  • 7. Depending on the strain, MHV can cause enteric, respiratory, or brain infections in mice. The enterotropic strains of MHV spread widely in susceptible mouse populations and are lethal in infant mice of many inbred strains (up to 100% fatality) (7). 
  • 8. Infection with MHV is a major concern in laboratory mice because it can disrupt mouse-based research through clinical disease and/or alteration of immunologic responses (8).
  • 9. MHV uses a cell-surface protein, mouse carcinoembryonic antigen-related cell adhesion molecule 1a (mCEACAM1a), as its host receptor (9, 10). The CEACAM1 protein is widely expressed in all mammals on the membranes of epithelial cells, endothelial cells, and leukocytes (11).
  • 10. It mediates cell-cell adhesion and signaling and participates in the differentiation and arrangement of tissue three-dimensional structure, angiogenesis, apoptosis, tumor suppression, cancer metastasis, and the modulation of innate and adaptive immune responses (12).
  • 11. The envelope-anchored MHV spike glycoprotein specifically recognizes mCEACAM1a through the N-terminal domain of its S1 subunit (S1-NTD) (9, 13, 14).
  • 12.  Previous Structural studies revealed that coronavirus S1-NTDs have the same tertiary structural fold as human galectins (galactose- binding lectins), and that whereas MHV S1-NTD recognizes mCEACAM1a, bovine coronavirus (BCoV) S1- NTD recognizes sugar (15, 16).
  • 13. Recent Study proposed that coronaviruses acquired a host galectin gene and inserted it into their spike protein gene, and that whereas bovine coronavirus S1-NTD has kept its original sugar-binding lectin activity,
  • 14. MHV S1-NTD has evolved novel mCEACAM1a- binding affinity and lost its original sugar- binding lectin activity. These studies have provided insight into the host receptor-adapting evolution of coronaviruses (5, 6).
  • 15. Other than their different MHV receptor activities, mCEACAM1a and mCEACAM1b appear to be functionally equivalent: neither 1a/1a mice nor 1b/1b mice show any growth defects, whereas a dysfunctional Ceacam1 gene leads to impaired insulin clearance, abnormal weight gain, and reduced fertility (22).
  • 16.  Previous structural studies of mCEACAM1a and its complex with MHV S1-NTD have delineated detailed interactions between mCEACAM1a and MHV S1-NTD (15, 23). 
  • 17. Moreover, previous studies identified the CC loop (loop that connects –β strands C and C′) in mCEACAM1a as critical for MHV binding; the sequence of this loop diverges in mCEACAM1b, partially accounting for the low MHV receptor activity of mCEACAM1b (17, 24).
  • 18. However, due to the lack of structural information about mCEACAM1b, it was not known what structural differences between mCEACAM1a and mCEACAM1b or whether additional residue differences between mCEACAM1a and mCEACAM1b account for the MHV resistance in mice homozygous for Ceacam1b.
  • 19. In the recent study they have determined the crystal structure of mCEACAM1b and elucidated the structural differences and additional residue differences between mCEACAM1a and mCEACAM1b that impede the binding of MHV S1- NTD to mCEACAM1b.
  • 20. Moreover, they have performed structure-guided mutagenesis studies onmCEACAM1a and mCEACAM1bto investigate the significance of their structural and sequence differences upon their MHV receptor activities.
  • 21. These results provide insight into the possibility that MHV has driven the evolution of the mCEACAM1 protein in mice. Due to alternative mRNA splicing, mCEACAM1 contains either two [D1 and D4] or four [D1-D4] Ig- like domains in tandem, in addition to a transmembrane anchor and a short intracellular tail at its C terminus (12).
  • 22. mCEACAM1b[D1,D4] (residues 1–202) without the membrane anchor or the intracellular tail was expressed and purified as previous described for mCEACAM1a[D1,D4] (15). The overall structure of mCEACAM1b[D1,D4] is similar to that of mCEACAM1a[D1,D4], but the structural similarity is uneven in different regions of the two proteins.
  • 23. In both mCEACAM1a and mCEACAM1b, the two Ig-like domains, D1 and D4, are arranged in tandem without any significant interactions with each other (Fig. 1, A and B). In mCEACAM1a, the D1 domain binds to MHVS1-NTD, whereas the D4 domain has no contact with MHV S1-NTD (Fig. 1C).
  • 24. In the D1 domain of mCEACAM1a, several loops (CC′, C′C″″, CD, and FG) and -strands (βC, βC′, and βC″) are directly involved in MHV binding, and thus these regions have been called the virus- binding motifs (VBMs) (Fig. 1, C and D).
  • 25.  Interestingly, the D1 domains of mCEACAM1a and mCEACAM1b are significantly more divergent in both primary structure (sequence identity 74%) and tertiary structure (main chain r.m.s.d. 1.11 Ǻ)than the D4 domains (sequence identity 98%; main chain r.m.s.d. 0.77Ǻ ‫إ‬( ) Fig. 2).
  • 26. Further inspection of the structures of mCEACAM1a and mCEACAM1b has identified detailed structural divergence between the VBMs of the two proteins.  In mCEACAM1a, a critical CC′ loop (loop that connects β-strands C and C′) in the D1 domain interacts extensively with MHV S1-NTD and thus plays a prominent role in the virus/receptor binding interactions (Fig. 3A).
  • 27.
  • 28. FIGURE 1. Overall structure of mouse CEACAM1b. A, crystal structure of mCEACAM1b[D1,D4] containing the D1 and D4 domains. Secondary structures in domain D1 of mCEACAM1b[D1,D4] are named after the mCEACAM1a[D1,D4] structure (23). B, crystal structure of mCEACAM1a[D1,D4] (PDB 1L67) (23). VBMs are in blue. C, crystal structure of mCEACAM1a[D1,D4] complexed with MHV S1-NTD (PDB 3R4D) (16). MHV S1-NTD is in cyan, with receptor-binding motifs (RBMs) in red. D, sequence alignment of mCEACAM1b[D1,D4] and mCEACAM1a[D1,D4]. -strands are shown as arrows. Virus binding motifs (VBMs )in mCEACAM1a and the corresponding regions in mCEACAM1b are in blue. Asterisks indicate positions that have fully conserved residues; colons indicate positions that have strongly conserved residues; periods indicate positions that have weakly conserved residues. The boundary between domains D1 and D4 is indicated by a black line. Sequence alignment was done using ClustalW (48). Structural