2. Learning objectives
2
At the end of the session, the students will be able to understand:
▰ Common zoonotic infections
▰ Epidemiology, virulence factors, clinical types, lab diagnosis, treatment and
prevention of plaque and tularemia.
▰ Bite wound infections and agents causing the infections
3. INTRODUCTION
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▰ Zoonosis is any disease or infection that is naturally transmissible from
vertebrate animals to humans.
▰ Animals thus play an essential role in maintaining zoonotic infections in
nature.
▰ Zoonoses - associated with bacterial, viral, or parasitic, or due to fungal
agents .
4. Important zoonotic infections affecting human
beings and their usual sources
4
Essentials of Medical Microbiology
Bacteria Animals
Anthrax Herbivores
Plague Rat
Brucellosis Sheep, goat, camel
Pasteurella infection Dog, cat
Capnocytophaga infection Dog
Rat bite fever Rodents
Leptospirosis Rodents
Non-typhoidal salmonellosis Poultry
Bovine tuberculosis Cow
Endemic typhus Rodents
Tularaemia Rabbits
Viruses Animals
Rabies Dogs
Yellow fever Monkeys
Japanese B encephalitis Pigs
Kyasanur forest disease Monkeys
Chikungunya Monkeys
Monkey pox Monkeys
Prion diseases Cattle
Hemorrhagic fevers Rodents, cattle, wild animals
Influenza Pigs, birds
5. Important zoonotic infections affecting human
beings and their usual sources (Cont..)
5
Essentials of Medical Microbiology
Fungi Animals
Zoophilic dermatophytoses
Trichophyton equinum Horse
Trichophyton simii Dogs, poultry
Microsporum canis Dogs
Microsporum equinum Horse
Sporothrix Cats
Malassezia Dogs, cats
Cryptococcus Wide variety of
animals, birds
Penicillium marneffei Bamboo rats
Lacazia loboi Dolphins
Conidiobolus Horses
Fungi Animals
Histoplasma Cattle, sheep
Coccidioides Dogs
Paracoccidioides Dogs
Blastomyces Dogs
Pneumocystis jirovecii Rodents
6. Important zoonotic infections affecting human
beings and their usual sources (Cont..)
6
Essentials of Medical Microbiology
Parasites Animals
Toxoplasma Cats
Leishmania Dogs
Taenia Pigs, cattle
Echinococcus Dog
Cryptosporidium Cattle
Fasciolopsis buski Pigs, cattle
Trichinella Pigs
Hookworms and Roundworms Dogs and cats
Dirofilaria and zoonotic
Brugia species
Dogs, cats, raccoons, etc.
7. Classification
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▰ Anthropozoonoses: Infections transmitted from animals to man
▰ Zooanthroponoses: Infections that are transmitted from man to animals
▰ Amphixenoses: Infections that are maintained in both man and animals that
may be transmitted in either direction.
Essentials of Medical Microbiology
10. PLAGUE (YERSINIA PESTIS)
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▰ Tribe Yersinieae - genus Yersinia - three well-established human pathogens
Yersinia pestis: rodent-borne zoonotic disease – plague
Yersinia pseudotuberculosis and Y.Enterocolitica— cause yersiniosis, a
self-limiting gastrointestinal illness
Essentials of Medical Microbiology
11. Plague Pandemics
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▰ First pandemic (in AD 541): Caused by biotype ‘Medievalis’
▰ Second pandemic (in 14th century) was called black death, Caused by biotype
‘Antiqua’
▰ Third pandemic (1894): Mainly affected India and China. Caused by biotype
‘Orientalis’.
Essentials of Medical Microbiology
12. Timeline of Plague in India
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▰ 1896 to 1918: Hong Kong pandemic entered India and millions of people were
killed
▰ 1918 to 1967: gradually declined, sporadic cases continued in endemic foci
▰ 1967 to 1994: No plague cases were reported
Essentials of Medical Microbiology
13. Timeline of Plague in India (Cont..)
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▰ 1994 (Surat epidemic): It started as bubonic plague from Beed-Latur belt in
Maharashtra - pneumonic plague - spread to Surat and adjoining regions of
Gujarat - 60 deaths in two months
▰ 2002 (Shimla outbreak): A short outbreak at Rohru, near Shimla. Four deaths
▰ 2004 (Uttarkashi outbreak): Localized outbreak of bubonic plague (8 cases
and 3 deaths) - Dangud village of Uttarkashi district, Uttaranchal
Essentials of Medical Microbiology
14. Timeline of Plague in India (Cont..)
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▰ Four potential endemic foci
1. Region near Kolar, Karnataka
2. Beed-Latur belt in Maharashtra
3. Rohru in Himachal Pradesh
4. Dangud village, Uttaranchal
Essentials of Medical Microbiology
15. Epidemiological Factors
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▰ Reservoir: Wild rodents, field mice & bandicoot
▰ Source of infection - wild rodents, rat fleas, cases of pneumonic plague
▰ Vector: Rat flea
Xenopsylla cheopis - Most efficient, North India
Xenopsylla astia - Less efficient, South India
Xenopsylla brasiliensis
Essentials of Medical Microbiology
16. Epidemiological Factors (Cont..)
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▰ Mode of transmission:
Bite of an infected rat flea (most common)
Direct contact with tissues of infected animal (rodents)
Droplet inhalation (man to man) - pneumonic plague
Bite of an infected human flea (Pulex irritans)
Essentials of Medical Microbiology
17. Epidemiological Factors (Cont..)
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Blocked flea:
Bacilli multiply enormously in the gut of flea and may block the proventriculus
- while making efforts to suck, it regurgitates the blood mixed bacteria into the
bite - transmission of infection
Contamination of bite wound with feces of infected fleas
Partially blocked flea is more dangerous than a completely blocked flea
Essentials of Medical Microbiology
18. Epidemiological Factors (Cont..)
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▰ Extrinsic incubation period – two weeks for Xenopsylla cheopis
▰ Cheopis index - Average number of X.cheopis per rat is most significant flea
index
Cheopis index >1 outbreak likely
▰ Seasonality: North India - September to May, South India - throughout the year
Essentials of Medical Microbiology
19. Virulence Factors of Y. pestis
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Fraction 1 (F1) antigen:
▰ Capsular protein antigen, encoded by a plasmid (pFra).
▰ Acts by inhibiting phagocytosis by macrophage.
▰ Highly antigenic and is used as immunodiagnostic marker of infection
Essentials of Medical Microbiology
20. Virulence Factors of Y. pestis (Cont..)
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▰ Other virulence factors include—Phospholipase D (murine toxin), surface
proteases, pH 6 antigen, lipopolysaccharide (endotoxin), pigments (hemin-
containing), type III secretion system, adhesins (help in attachment), and
siderophore (helps in acquisition of iron)
Essentials of Medical Microbiology
21. Human Plague: Clinical Types
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▰ Bubonic
▰ Pneumonic
▰ Septicemic
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22. Bubonic Plague
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▰ Most common type, transmitted by the bite of an infected rat flea
▰ Bacilli pass through the local lymphatics - regional lymph nodes - multiply
▰ Incubation period: 2–7 days
▰ Sudden onset, fever, malaise, headache & painful lymphadenitis
▰ Cannot spread from person to person
Essentials of Medical Microbiology
23. Bubonic Plague (Cont..)
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▰ Buboes: Regional lymph nodes - tense,
tender swellings “buboes”
Common site - inguinal
Other sites - crural, axillary, cervical, or
submaxillary
Essentials of Medical Microbiology
24. Pneumonic Plague
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▰ Spread: Inhalation of bacilli in droplets expelled from another person or an
animal with plague pneumonia
▰ Incubation period: 1–3 days
▰ Manifestation: Sudden onset fever, headache and respiratory symptoms pain ™
▰ Rare (<1%) but highly infectious and highly fatal
▰ Agent of bioterrorism
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25. Septicemic Plague
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▰ Secondary septicemic plague is more
common than Primary
▰ From spread of bubonic or pneumonic plague
▰ Incubation period:2–7 days
▰ Hemorrhages in the skin and mucosa -
gangrene of affected site - black death
Essentials of Medical Microbiology
26. Laboratory Diagnosis - Specimen Collection
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▰ Bubonic plague—pus or fluid aspirated from buboes
▰ Pneumonic plague—sputum and blood
▰ Septicemic plague—blood and splenic aspirate (post mortem)
▰ Transport medium - Cary–Blair medium
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27. Laboratory Diagnosis - Direct Microscopy
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▰ Gram staining: Gram negative oval
coccobacilli surrounded by
capsule
▰ Wayson stain or methylene blue
stain - bipolar or safety pin
appearance
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28. Laboratory Diagnosis - Culture
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▰ Y. pestis is aerobic and facultatively anaerobic
▰ Blood agar: Non-hemolytic and dark brown pigmented colonies (absorption of
the hemin)
▰ MacConkey agar: Lactose non-fermenting
Essentials of Medical Microbiology
29. Laboratory Diagnosis - Culture Smear and
Motility Testing
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▰ Gram staining of culture smear - pleomorphism-coccid, coccobacillary,
bacillary, filamentous and giant forms.
▰ Y. pestis - nonmotile both at 25°C and 37°C; in contrast to other Yersinia
species which are motile at 25°C and nonmotile at 37°C.
Essentials of Medical Microbiology
30. Laboratory Diagnosis - Identification
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▰ Catalase positive and oxidase negative
▰ ICUT tests: Indole test (negative), citrate test (negative), urease test (negative)
and TSI (triple sugar iron agar) test shows alkaline/acid, gas absent, H2S
absent
▰ MALDI-TOF - rapid accurate identification of Y. pestis and also to differentiate
its three biotypes.
Essentials of Medical Microbiology
31. Laboratory Diagnosis - F1 Antigen Detection
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▰ From bubo aspirate or sputum by direct immunofluorescence test, ELISA or
immunochromatographic test (ICT)
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32. Laboratory Diagnosis - Antibodies to F1 Antigen
Detection
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▰ By ELISA, passive agglutination or CFT
▰ Limited diagnostic value as they appear late
▰ Useful epidemiological markers
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33. Laboratory Diagnosis - Molecular Methods
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▰ PCR – gene coding F1 antigen, pesticin gene, and the plasminogen activator
gene
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34. Treatment of Plague
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▰ Streptomycin - treatment for plague in the past, given for 10 days
▰ Gentamicin is superior to streptomycin and currently recommended for
treatment
▰ Levofloxacin - recently been approved for treatment and for post-exposure
prophylaxis
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35. Treatment of Plague (Cont..)
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▰ Alternative drugs - doxycycline and chloramphenicol are also effective.
▰ β-lactams and macrolides - not recommended as the response is poor.
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36. Prevention of Plague
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▰ Control of cases by early diagnosis, isolation and treatment of cases
▰ Control of fleas by use of effective insecticides - DDT or BHC
▰ Control of rodents
▰ Chemoprophylaxis - all contacts of pneumonic plague - Doxycycline or
levofloxacin - for 7 days
Essentials of Medical Microbiology
37. Prevention of Plague (Cont..)
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Vaccine: For prevention of an anticipated outbreak and not for general use
▰ Formalin killed vaccine (Sokhey’s modification of original Haffkine vaccine):
Subcutaneous, two doses 4 weeks apart - booster after 6 months
Protection is short-lasting (<6 months)
Not protective against pneumonic plague and has considerable side effects
Essentials of Medical Microbiology
38. Prevention of Plague (Cont..)
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Vaccine (Cont..):
▰ Live attenuated vaccine based on strain EV76
Still used in countries of the former Soviet Union
Has significant side effects
Essentials of Medical Microbiology
40. TULARAEMIA (FRANCISELLA TULARENSIS)
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▰ Causative agent of ‘tularemia’ primarily a plague-like disease of rodents and
other small animals
▰ Human infection is zoonotic and usually results from:
Interaction with biting or blood-sucking insects (especially ticks and
tabanid flies)
Ingestion of contaminated water or food
Inhalation of infective aerosols.
Essentials of Medical Microbiology
41. Prevalence
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▰ Four subspecies: tularensis, holarctica, novicida, and mediasiatica
▰ First three subspecies are found in North America, whereas subspecies
mediasiatica is found in centralAsia
▰ Subspecies tularensis - most common & most virulent among all.
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42. Clinical Manifestations
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▰ Ulceroglandular tularemia: Ulcerative lesion at the site of inoculation, with
regional lymphadenopathy
▰ Other forms include—Pulmonary, oropharyngeal, oculoglandular form and
typhoid-like illness
Essentials of Medical Microbiology
43. Clinical Manifestations (Cont..)
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▰ Complications: Suppurated lymph nodes, acute kidney injury, hepatitis,
rhabdomyolysis, empyema, pericarditis, meningitis, osteomyelitis and
endocarditis
▰ Agent of bioterrorism
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44. Laboratory Diagnosis
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▰ Culture: Highly fastidious - special media - BCG agar (blood cysteine glucose
agar)
▰ Specimen: Ulcer scrapings, and lymph node biopsy are the preferred
specimens
▰ Safety precautions - biosafety level III must be used to handle clinical
specimens to avoid the risk of laboratory-acquired infection
Essentials of Medical Microbiology
45. Laboratory Diagnosis (Cont..)
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▰ Antibody detection - Agglutination tests (latex and tube agglutination) and
ELISA
▰ PCR assay - F. tularensis specific genes encoding the outer-membrane
proteins - also differentiate subspecies.
Essentials of Medical Microbiology
46. Treatment of Tularemia
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▰ Gentamicin - drug of choice; given for 7–10 days.
▰ Doxycycline or ciprofloxacin - alternatives.
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48. BITE WOUND INFECTIONS
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▰ Bites and scratches from animals and humans allow the inoculation of
microorganisms that are commonly found in the animal’s oral cavity, nose or
nail.
Essentials of Medical Microbiology
49. BITE WOUND INFECTIONS (Cont..)
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▰ They cause a range of infections such as:
Lodging of the organisms on the wound surface - bite-wound infections
Can breach skin barrier and penetrate into the deeper tissue
Invasion of lymphatics and blood - various systemic infections -
bacteremia, meningitis, brain abscess, and endocarditis.
Rarely, infection of the cutaneous nerves can carry the organism to CNS
(e.g. rabies causing encephalitis).
Essentials of Medical Microbiology
50. Dog Bites
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▰ Dog bites - 80% of all animal-bite wounds, of which about 15–20% become
infected.
▰ Age/gender: Victims - often children than adults, and males than females
▰ Site: Upper extremity, except for children <4 years - head and neck region
Essentials of Medical Microbiology
51. Dog Bites (Cont..)
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Microbiology:
▰ Common aerobes - β-hemolytic streptococci, Pasteurella species,
Staphylococcus, Eikenella corrodens, and Capnocytophaga canimorsus
▰ Many wounds also include anaerobic bacteria - Actinomyces, Fusobacterium,
Prevotella, and Porphyromonas species
▰ Organisms causing systemic diseases: Rabies and tetanus.
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52. Cat Bites
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▰ Compared to dog bite, they are also at a higher risk of causing penetrating
injury leading septic arthritis and osteomyelitis (especially in the hand); owing
to their narrow, sharp canine teeth
▰ Victims of cat bite are more often women than men
Essentials of Medical Microbiology
53. Cat Bites (Cont..)
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▰ Microbiology: The organism implicated in cat-bite wound infections is usually
mixed, from cat’s oropharynx; similar to that of dog bite
Essentials of Medical Microbiology
54. Human Bites
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▰ Human bites may take place during
fights, domestic abuse, sexual activity or
healthcare workers caring for patients.
▰ Types of human bites:
Occlusional injuries
Clenched-fist injuries
Essentials of Medical Microbiology
Clenched-fist injuries
55. Human Bites (Cont..)
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Microbiology:
▰ Common aerobic isolates - viridans streptococci, S. aureus, Eikenella
corrodens (common in clenched-fist injury), and Haemophilus influenzae
▰ Anaerobic species - Fusobacterium nucleatum and Prevotella, Porphyromonas,
and Peptostreptococcus species
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56. Other Animal Bites
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▰ Rat bite infections
▰ Snakebites
▰ Bites from Old World monkeys
▰ Bites of seals
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57. Laboratory Diagnosis for Bite Wound Infections
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▰ The best material for culture - purulent exudate aspirated from the depth of
the wound or samples obtained during surgery .
▰ Most common specimen - wound swab - not suitable for anaerobic culture,
unless immediately dipped into an anaerobic transport media
Essentials of Medical Microbiology
58. Laboratory Diagnosis for Bite Wound Infections
(Cont..)
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▰ Gram-stained smears - prepared and examined
▰ For aerobic cultures, a minimum of blood, MacConkey and chocolate agar
should be inoculated
▰ Anaerobic culture is necessary if abscesses, devitalized tissue, or foul-
smelling exudate is present.
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59. Pasteurellosis
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▰ Pasteurella species - harbored as normal flora in the oral cavity of cats and
dogs.
▰ Hemorrhagic septicemia in animals.
▰ Pasteurella multocida - most common species infecting man.
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60. Pasteurellosis (Cont..)
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▰ Clinical features:
▰ Affected area of bite becomes red, swollen and painful with regional
lymphadenopathy and low grade fever
▰ More serious cases - bacteremia , osteomyelitis or endocarditis or meningitis.
Essentials of Medical Microbiology
61. Pasteurellosis (Cont..)
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▰ Laboratory diagnosis: P. multocida - gram-negative coccobacillus, readily
grows in culture media. Identification - biochemically or through automated
methods - MALDI-TOF or VITEK
▰ Treatment: Penicillin G or amoxicillin-clavulanate
Essentials of Medical Microbiology
62. Capnocytophaga Infection
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▰ Several species - C. ochracea, C. gingivalis and C. sputigena - human mouth
flora.
▰ Occasionally cause periodontal diseases, and sepsis/meningitis in
immunocompromised hosts
▰ C. canimorsus and C. cynodegmi - commensals in mouth of dogs
Essentials of Medical Microbiology
63. Capnocytophaga Infection (Cont..)
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▰ Laboratory diagnosis: Fusiform or filamentous gram-negative coccobacilli
▰ Capnophilic (require CO2), grow in enriched media (e.g. blood agar), and
produce orange-pigmented colonies. Grow slowly - 14 days
▰ Identification - biochemically or through automated methods - MALDI-TOF or
VITEK.
Essentials of Medical Microbiology
64. Capnocytophaga Infection (Cont..)
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Treatment:
▰ As they produce β-lactamases, β lactam/ β-lactam inhibitor combination -
ampicillin-sulbactam is used as the drug of choice.
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65. Rat-bite Fever
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▰ Rat-bite fever (RBF) - septic fever, petechial rashes, and painful polyarthritis
with frequent relapses.
▰ Caused by either of the two pathogens: (1) Streptobacillus moniliformis, and
(2) Spirillum minus.
Essentials of Medical Microbiology
66. Rat-bite Fever (Cont..)
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Transmission:
▰ Transmitted by contact with rodents carrying these bacteria
▰ Consumption of food or water contaminated with the urine and droppings of
rodents carrying the bacteria - Haverhill fever or epidemic arthritic erythema
Essentials of Medical Microbiology
67. Rat-bite Fever (Cont..)
67
▰ Streptobacillus moniliformis: Causes RBF in North America
Gram-negative, highly pleomorphic non-motile bacilli, arranged in chains
and tangled filaments with bulbous swellings. Tendency to form L-form
Isolated from blood, synovial fluid and other infected tissues
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68. Rat-bite Fever (Cont..)
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▰ Spirillum minus: Causes RBF in Asia (known as Sodoku)
Rigid, spirally coiled motile bacilli
Doesn’t grow in artificial media.
▰ Treatment: Penicillin
Essentials of Medical Microbiology
69. Questions:
69
▰ Q1. Plague is transmitted by:
a. Rat flea
b. Soft tick
c. Hard tick
d. Louse
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70. Questions:
70
▰ Q2. Rat bite fever is caused by:
a. Borrelia recurrentis
b. Streptobacillus moniliformis
c. Yersinia pestis
d. Leptospira
Essentials of Medical Microbiology