MongoDB is a NoSQL database that stores data in BSON format, which is a binary encoding of JSON. It uses collections instead of tables, does not enforce schemas heavily, and queries use BSON queries. Data can be inserted, updated, and deleted from collections. Apache Hive also runs on Hadoop and uses HDFS for storage. It provides SQL-like queries using HiveQL, but organizes data into databases, tables, partitions, and buckets. Hive queries actually generate MapReduce jobs, so they can take a long time to complete for large datasets.