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New

miScript™ miRNA PCR Arrays
miRNA expression profiling redefined
The miScript PCR System has always delivered the most robust, specific, and sensitive quantification of miRNAs available.
Now, this cutting-edge PCR technology also enables comprehensive profiling of miRNAs for disease research and potential
biomarker discovery using extensively verified miScript miRNA PCR Arrays.

miScript PCR System provides:

1. Isolate miRNA with the miRNeasy Kit or the miRNeasy FFPE Kit
2. Convert miRNA to cDNA in a one-step, single-tube reverse
transcription reaction.

„„ Disease- and pathway-focused or whole miRNome arrays
„„ Customizable PCR array solutions
„„ Robust, sensitive, and reproducible performance

RNA Sample 1

„„ Free Web-based and automated data analysis tools
5‘

miRNA expression profiling for your area of interest

Poly(A) tail

5‘

to a growing repertoire of biological and disease pathways have been
identified and incorporated into the miScript miRNA PCR Arrays. This
system allows rapid, comprehensive profiling of the most important

Reverse
transcription

3‘
A A A A A(A)n
TTT T TT

Universal RT Primer

method to explore the role of miRNAs in a variety of biological contexts.
Using thorough bioinformatics and literature analysis, miRNAs related

3‘
A A A A A(A)n

Single tube reaction

efficiency, and sensitivity of the miScript PCR System provides a reliable

Polyadenylation

3‘

5‘

The combination of pathway-focused PCR arrays with the specificity,

miRNA

RNA Sample 2

5‘

First strand cDNA

TTT T TT

3‘

3. Combine cDNA to QuantiTect SYBR Green PCR Mastermix,
miScript Universal Primer, and water.
Aliquot mixture across miScript miRNA PCR Array.

miRNAs related to your pathway of interest.

miScript Primer Assay
TTT T TT

5‘
cDNA

Figure 1. miScript miRNA PCR Array
Layout. miScript miRNA PCR Arrays
provide miScript Primer Assays for 84
miRNAs involved in your pathway of
interest, as well as controls for data
normalization, reverse transcription
performance, and PCR performance.
Data normalization controls include
primer assays for C. elegans miR-39 and
6 miScript PCR Controls. The cel-miR-39
assay detects the Syn-cel-miR-39 miScript
miRNA Mimic, which can be added to
samples, particularly serum or plasma
samples, to control for variations during
the preparation of total RNA and subsequent steps. The 5 snoRNAs and 1 snRNA targeted
by the miScript PCR Controls have relatively stable expression across tissues and cell types
and amplification efficiencies close to 100%. Moreover, they are designed with sequence
homologies for human, rat, mouse, and dog, and can therefore be used for all available
species.

3‘
Universal Primer

qPCR using miScript Primer Assay
and miScript Universal Primer

4. Run in real-time PCR cycler.
data

data

5. Analyze data.

Figure 2. miScript miRNA PCR Array workflow.

Sample & Assay Technologies
ProductProfile

Focus on pathway biology

Biomarker discovery in human colon tumors

„„ Complete miRNome

Human colon tumor versus adjacent normal tissue

4

„„ miFinder
„„ Cell Differentiation & Development

3

Log2 Fold-Difference

„„ Inflammatory Response & Autoimmunity
2

„„ Brain Cancer
„„ Cancer PathwayFinder

1

„„ Immunopathology
0

„„ Serum & Plasma
„„ Neurological Development & Disease
„„ Breast Cancer

m
iR
-1
83

m
iR
-1
99
a3p

m
iR
-9
6

-2

m
iR
-1
96
a

-1

„„ Ovarian Cancer

Figure 3. Human Cancer PathwayFinder miScript miRNA PCR Array identifies potential colon
cancer biomarkers. Total RNA isolated from human colon tumor and matched adjacent normal
tissue was characterized with Cancer PathwayFinder miScript miRNA PCR Arrays containing
assays specific for 84 cancer-related human miRNA sequences. Fold differences are calculated
from raw CT values normalized to a panel of miScript PCR Controls.

„„ Custom Array

Ordering Information
Product

Contents

Cat. no.

miRNome miScript miRNA PCR Array

miRNome panels of miRNA assays

331222

miScript miRNA PCR Array

Pathway or disease panels of miRNA assays

331221

Custom miScript miRNA PCR Array

Custom panels of miRNA assays

331231

miRNeasy Mini Kit (50)

Columns, plasticware, and reagents for 50 preps

217004

miRNeasy FFPE Kit (50)

Columns, plasticware, and reagents for 50 preps

217504

miScript II RT Kit (12)

Reagents for 12 x 20 µl cDNA synthesis reactions

218160

miScript SYBR Green PCR Kit (200)

Reagents for 200 x 50 µl PCRs

218073

miScript Primer Assay (100)

miRNA-specific primer for 100 x 50 µl PCRs

Varies*

miScript Precursor Assay (100)

Precursor-specific primer pair for 100 x 50 µl PCRs

Varies*

* Visit GeneGlobe to search for and order these products www.qiagen.com/GeneGlobe.

Discover more, visit www.qiagen.com/miRNA !
For up-to-date licensing information and product-specific disclaimers, see the respective QIAGEN kit handbook or user manual.
QIAGEN kit handbooks and user manuals are available at www.qiagen.com or can be requested from QIAGEN Technical
Services or your local distributor.
Trademarks: QIAGEN®, miScript™, QuantiTect® (QIAGEN Group); SYBR® (Life Technologies Corporation).
1070193 10/2011 © 2011 QIAGEN, all rights reserved.

www.qiagen.com
Australia n 1-800-243-066
Austria n 00800-22448000
Belgium n 00800-22448000
Brazil n 0800-557779

Canada n 0800-362-7737
China n 0800-988-0325
Denmark n 00800-22448000
Finland n 00800-22448000
France n 00800-22448000
Germany n 00800-22448000

Ireland n 00800-22448000
Italy n 00800-22448000
Japan n 03-5632-9610
Luxembourg n 00800-22448000
Mexico n 01-800-7742-436
Netherlands n 00800-22448000

Norway n 00800-22448000
Singapore n 1800-742-4368
Sweden n 00800-22448000
Switzerland n 00800-22448000
UK n 00800-22448000
USA n 1-888-503-3187

Sample & Assay Technologies

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Mi rna brochure_set

  • 1. ProductProfile New miScript™ miRNA PCR Arrays miRNA expression profiling redefined The miScript PCR System has always delivered the most robust, specific, and sensitive quantification of miRNAs available. Now, this cutting-edge PCR technology also enables comprehensive profiling of miRNAs for disease research and potential biomarker discovery using extensively verified miScript miRNA PCR Arrays. miScript PCR System provides: 1. Isolate miRNA with the miRNeasy Kit or the miRNeasy FFPE Kit 2. Convert miRNA to cDNA in a one-step, single-tube reverse transcription reaction. „„ Disease- and pathway-focused or whole miRNome arrays „„ Customizable PCR array solutions „„ Robust, sensitive, and reproducible performance RNA Sample 1 „„ Free Web-based and automated data analysis tools 5‘ miRNA expression profiling for your area of interest Poly(A) tail 5‘ to a growing repertoire of biological and disease pathways have been identified and incorporated into the miScript miRNA PCR Arrays. This system allows rapid, comprehensive profiling of the most important Reverse transcription 3‘ A A A A A(A)n TTT T TT Universal RT Primer method to explore the role of miRNAs in a variety of biological contexts. Using thorough bioinformatics and literature analysis, miRNAs related 3‘ A A A A A(A)n Single tube reaction efficiency, and sensitivity of the miScript PCR System provides a reliable Polyadenylation 3‘ 5‘ The combination of pathway-focused PCR arrays with the specificity, miRNA RNA Sample 2 5‘ First strand cDNA TTT T TT 3‘ 3. Combine cDNA to QuantiTect SYBR Green PCR Mastermix, miScript Universal Primer, and water. Aliquot mixture across miScript miRNA PCR Array. miRNAs related to your pathway of interest. miScript Primer Assay TTT T TT 5‘ cDNA Figure 1. miScript miRNA PCR Array Layout. miScript miRNA PCR Arrays provide miScript Primer Assays for 84 miRNAs involved in your pathway of interest, as well as controls for data normalization, reverse transcription performance, and PCR performance. Data normalization controls include primer assays for C. elegans miR-39 and 6 miScript PCR Controls. The cel-miR-39 assay detects the Syn-cel-miR-39 miScript miRNA Mimic, which can be added to samples, particularly serum or plasma samples, to control for variations during the preparation of total RNA and subsequent steps. The 5 snoRNAs and 1 snRNA targeted by the miScript PCR Controls have relatively stable expression across tissues and cell types and amplification efficiencies close to 100%. Moreover, they are designed with sequence homologies for human, rat, mouse, and dog, and can therefore be used for all available species. 3‘ Universal Primer qPCR using miScript Primer Assay and miScript Universal Primer 4. Run in real-time PCR cycler. data data 5. Analyze data. Figure 2. miScript miRNA PCR Array workflow. Sample & Assay Technologies
  • 2. ProductProfile Focus on pathway biology Biomarker discovery in human colon tumors „„ Complete miRNome Human colon tumor versus adjacent normal tissue 4 „„ miFinder „„ Cell Differentiation & Development 3 Log2 Fold-Difference „„ Inflammatory Response & Autoimmunity 2 „„ Brain Cancer „„ Cancer PathwayFinder 1 „„ Immunopathology 0 „„ Serum & Plasma „„ Neurological Development & Disease „„ Breast Cancer m iR -1 83 m iR -1 99 a3p m iR -9 6 -2 m iR -1 96 a -1 „„ Ovarian Cancer Figure 3. Human Cancer PathwayFinder miScript miRNA PCR Array identifies potential colon cancer biomarkers. Total RNA isolated from human colon tumor and matched adjacent normal tissue was characterized with Cancer PathwayFinder miScript miRNA PCR Arrays containing assays specific for 84 cancer-related human miRNA sequences. Fold differences are calculated from raw CT values normalized to a panel of miScript PCR Controls. „„ Custom Array Ordering Information Product Contents Cat. no. miRNome miScript miRNA PCR Array miRNome panels of miRNA assays 331222 miScript miRNA PCR Array Pathway or disease panels of miRNA assays 331221 Custom miScript miRNA PCR Array Custom panels of miRNA assays 331231 miRNeasy Mini Kit (50) Columns, plasticware, and reagents for 50 preps 217004 miRNeasy FFPE Kit (50) Columns, plasticware, and reagents for 50 preps 217504 miScript II RT Kit (12) Reagents for 12 x 20 µl cDNA synthesis reactions 218160 miScript SYBR Green PCR Kit (200) Reagents for 200 x 50 µl PCRs 218073 miScript Primer Assay (100) miRNA-specific primer for 100 x 50 µl PCRs Varies* miScript Precursor Assay (100) Precursor-specific primer pair for 100 x 50 µl PCRs Varies* * Visit GeneGlobe to search for and order these products www.qiagen.com/GeneGlobe. Discover more, visit www.qiagen.com/miRNA ! For up-to-date licensing information and product-specific disclaimers, see the respective QIAGEN kit handbook or user manual. QIAGEN kit handbooks and user manuals are available at www.qiagen.com or can be requested from QIAGEN Technical Services or your local distributor. Trademarks: QIAGEN®, miScript™, QuantiTect® (QIAGEN Group); SYBR® (Life Technologies Corporation). 1070193 10/2011 © 2011 QIAGEN, all rights reserved. www.qiagen.com Australia n 1-800-243-066 Austria n 00800-22448000 Belgium n 00800-22448000 Brazil n 0800-557779 Canada n 0800-362-7737 China n 0800-988-0325 Denmark n 00800-22448000 Finland n 00800-22448000 France n 00800-22448000 Germany n 00800-22448000 Ireland n 00800-22448000 Italy n 00800-22448000 Japan n 03-5632-9610 Luxembourg n 00800-22448000 Mexico n 01-800-7742-436 Netherlands n 00800-22448000 Norway n 00800-22448000 Singapore n 1800-742-4368 Sweden n 00800-22448000 Switzerland n 00800-22448000 UK n 00800-22448000 USA n 1-888-503-3187 Sample & Assay Technologies