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PRECISION
MEDICINE
W I T H D A L T O N
Peter Pekos
an Overview
This technical report is intended to provide an overview to key
stakeholders including regulatory professionals on precision
medicine. This technical report should be read in conjunction with
the relevant laws, regulations, and guidance's that apply to your
situation.
Disclaimer
FDA inspected, HC approved, & MRA with EMA
2
"Dalton Pharma Services uses its scientific and pharmaceutical
expertise to bring customer ideas to life. We develop their new drug
products, optimize the synthesis of therapeutic candidates, and
manufacture them at the highest level of quality."
Company Vision
Precision Medicine
Precision medicine is an emerging strategy that considers individual
variability in genes, environment, and lifestyle to identify, treat, predict, and
prevent disease among patients.
Precision medicine has become increasingly feasible due to improved
understanding and advancing technologies, such as next-generation
sequencing, of individual variability in the human genome.
DID YOU
KNOW? The global market for precision
medicine was valued at 43.6 billion USD
in 2016 and is estimated to triple in the
next decade.
$43.6 b
3
The field of molecular biology known as genomics is concerned with the
structure, function, evolution, and mapping of genomes. Next-generation
sequencing and biomarkers are examples of how genome characteristics are
measured and analyzed.
Precision medicine uses genomics to identify disease-specific variants or
biomarkers in a patient’s genome to determine the best-suited treatment
available to them.
Genomics
4
Next-generation sequencing (NGS)
The precise and quick sequencing of genes is made possible by
next-generation sequencing technology. Next-generation
sequencing works by sequencing fragments of an individual's DNA
or RNA molecules and ligating them to adapters, rather than
sequencing their full genetic code from scratch. This is then
compared to a DNA library that undergoes clonal amplifications
and uses algorithms to fill in the blanks. During the procedure, any
variations or mutations can be identified.
Biomarkers
Biomarkers are measurable substances within an organism such
as antibodies, thyroid hormone levels, or prostate-specific
antigens (PSA), whose presence is indicative that a normal
biological process, or a pathogenic process such as disease,
infection, or toxicity is taking place within an organism.
5
Pharmacogenetics
Precision medicine also uses pharmacogenomics (the study of how genes
affect a person’s response to particular drugs) to develop effective and safe
treatment options that are tailored to the variations in a person’s genes.
Precision Medicine vs Personalized Medicine
By virtue of its name, the term “personalized medicine” may be easily
misinterpreted to mean that every patient can receive completely
individualized treatments, which is not the case. Hence, the medical industry
is moving away from this term and toward the term “precision medicine,”
which more accurately infers a treatment approach that considers an
individual’s unique characteristics, such as genetic variability.
6
Precision medicine aims to match each individual patient to the appropriate
therapies and at the appropriate dose to initiate the desired response. Hence,
it is critical to understand the primary causes for variation in response to
treatment: pharmacokinetics and pharmacodynamics.
Pharmacokinetics (PK) is concerned with the movement of drugs
within the body. PK variability includes:
•Subject phenotype: weight, body surface area, organ status, age,
ethnicity, gender, microbiome
•Subject genotype: polymorphisms in metabolizing enzymes or
transporters
•Disease response or advancement over time
•Lifestyle and environmental variables including concomitant
medications, diet, and smoking
•Adherence to the prescribed course of action, dosage, and medicine
formulation.
Pharmacodynamics (PD) is concerned with the mechanism of action
and effects of a drug. PD variability includes polymorphism in drug
target or downstream pathway and driver mutations of disease
heterogeneity.
Foundation of Precision Medicine
7
Therapeutic drug monitoring is also a key component of precision medicine.
Therapeutic drug monitoring provides insight into dosage adjustments that
may be needed to meet the predefined target exposure in each patient,
lowering response variability. Drug doses may be adjusted based on
biomarkers such as glucose/glycosylated hemoglobin, cholesterol, prostate-
specific antigens, and blood pressure.
8
Examples of Precision Medicine as A
Treatment Tool
•The drug Ivacaftor to treat individuals with cystic
fibrosis (CF) who have very specific pathogenic
mutations in the gene CFTR.
•The use of Primaquine to treat malaria in people
who do not have G6PD gene variants.
•The use of Imatinib to treat chronic myelogenous
leukemia (CML) in patients whose tumor harbors
the Abelson proto-oncogene (abl) and breakpoint
cluster region (bcr) fusion mutation.
9
Abacavir is likely to cause multi-organ system
hypersensitivity in persons with HIV infection with
the HLA-B*5701 gene. Therefore, it is advised that all
patients who are administered Abacavir undergo
genetic testing.
Example of Precision Medicine as A
Predictive Tool
Drugs like warfarin, primaquine (PQ), and imatinib
that seem to only work without side effects when a
patient has a specific genetic profile.
Example of Precision Medicine as A
Preventative Tool
10
Patient’s
genome
Sample
(i.e.,
biomarker)
Genome
sequencing/
testing
(i.e., NGS)
Genome
analysis
Pharmacogenetic
interpretation
Precision
medicine
application
(diagnostic,
treatment,
prediction,
prevention)
Precision Medicine
11
Certain gene or protein changes can affect how cancer responds to certain
treatments. Therefore, before starting treatment, health care providers may
take a biopsy to test the cancer cells for certain gene and protein changes to
help determine which treatments are likely to work best.
The two types of treatment most commonly used in oncology precision
medicine are targeted drug therapy (drugs designed to attack a specific target
on cancer cells) and immunotherapy (medicines used to help the body’s
immune system attack the cancer).
For more on oncology treatments, view our latest whitepaper, Drug Development
in Oncology: An Overview.
Precision Medicine and Cancer
12
•Relies on evidence outside of
traditional randomized, drug-
centered clinical trials
•Absence of concise regulatory
guidance
•Higher setup costs
•Higher medication prices for
specific subgroups of patients
•Legal, social, and ethical issues
•Patency and intellectual property
concerns
•Privacy, confidentiality, and patient
rights concerns
All these issues impact safety, effectiveness,
and sustainability.
DID YOU
KNOW?
In the US, The Health
Insurance Portability and
Accountability Act of
1996 (HIPAA) was
enacted to ensure that
personal medical
information stored,
accessed, or processed
adheres to a set of
privacy guidelines.
Challenges in Precision Medicine
13
Next Step & Opportunities in Precision Medicine
•Elevating mechanistic understanding, such as why the body reacts
negatively to a treatment and what triggers differences in efficacy
•Improving manufacturing capabilities
•Further exploring current technologies (i.e., omics including
proteomics, metabolomics, and genomics)
•Advancing in new technologies (i.e., CRISPR)
14
The emergence and evolving field of precision medicine necessitate that
global regulatory bodies adopt an integrated policy framework that balances
the needs of patients, industry, and science without impeding the
development of this revolutionary sector. This may entail adopting new
approaches to product approval.
Although regulatory guidance among global regulators is still in development,
the FDA provides can serve as an example on how to approach precision
medicine.
As the FDA and other health authorities continue to develop clearer regulatory
pathways in precision medicine, life sciences industries must prepare to
quickly adopt shifts in regulations related to precision medicine.
Regulatory
15
In 2015, precisionFDA was introduced - a cloud-based site for community
research and development that enables users from across the globe to
share data and tools to test, pilot, and validate existing and novel
bioinformatics approaches to next-generation sequencing processing.
In 2020, the FDA published several guidance documents on the
manufacturing and clinical development of gene and cell-based
therapeutic products, which provided updated guidance on the process to
obtain approval for the commercialization of new therapeutics, including
when and under what circumstances the use of a new drug must be
preceded and/or accompanied by a diagnostic or screening test.
In 2021, the FDA provided further clarity on developing new drug products
in the age of individualized medicine, specifically for the development of
antisense oligonucleotide (ASO) products, as it is the most advanced
individualized genetic drug products thus far, by releasing a new draft
guidance on investigational new drug (IND) submissions for individualized
ASO drug products.
The CDER has also been developing infrastructure programs
and review capacity to be on the leading edge of precision
medicine initiatives.
16
At Dalton we can help with drug innovation through our cGMP APIs.
Our skilled scientists can support your drug discovery process through
API synthesis for all stages of pre-clinical and clinical trials as well as
small scale commercial manufacturing. We provide integrated process
development, API manufacturing and finished dose manufacturing at a
single location with the expertise required for developing a process that
is robust, transferable, and scalable to meet your requirements.
We bring over 35 years of experience
developing products for our clients that
are compliant, transferable, and scalable.
Dalton's
Services
17
Our API development services include:
•Lead identification
•Synthetic route development
•Feasibility studies & tech transfer
•Process optimization & scale-up
•Scale-up troubleshooting
•Engineering batches
•cGMP API manufacturing
18
For more information on services we provide, visit our website.
Dalton is Health Canada licensed
to manufacture, test, and package
complex pharmaceutical products
for global markets. US FDA
inspected; Dalton
manufactures commercial products
for the USA. The MRA (Mutual
Recognition Agreement), recognizes
Health Canada Licensed facilities in
seven countries.
19
1. FDA. (2022). Focus Area: Individualized Therapeutics and Precision Medicine. Food and Drug Administration.
https://www.fda.gov/science-research/focus-areas-regulatory-science-report/focus-area-individualized-therapeutics-and-precision-medicine
2. FDA. (2021). FDA Takes Steps to Provide Clarity on Developing New Drug Products in the Age of Individualized Medicine.
Food and Drug Administration. https://www.fda.gov/news-events/press-announcements/fda-takes-steps-provide-clarity-developing-new-
drug-products-age-individualized-medicine
3. Health IT Analytics. (2020). What Are Precision Medicine and Personalized Medicine?
https://healthitanalytics.com/features/what-are-precision-medicine-and-personalized-medicine
4. Goetz, L. H., & Schork, N. J. (2018). Personalized medicine: motivation, challenges, and progress. Fertility and sterility,
109(6), 952–963. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366451/
5. Akhoon N. (2021). Precision Medicine: A New Paradigm in Therapeutics. International journal of preventive medicine, 12, 12.
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8106271/
6. American Cancer Society. (2022). Precision or Personalized Medicine. https://www.cancer.org/treatment/treatments-and-side-
effects/treatment-types/precision-medicine.html
7. RAPS. (2016). Precision Medicine: Technology, Regulations and Challenges. Regulatory Affairs Professional Society.
https://www.raps.org/regulatory-focus%E2%84%A2/news-articles/2016/3/precision-medicine-technology,-regulations-and-challenges
8. PMC. (2020). Personalized medicine at FDA - The Scope & Significance of Progress in 2020.
https://www.mastercontrol.com/gxp-lifeline/3-ways-to-rethink-regulatory-change-in-personalized-medicine/ LINK WITHIN
9. McAlister, F. A., Laupacis, A., & Armstrong, P. W. (2017). Finding the right balance between precision medicine and
personalized care. CMAJ: Canadian Medical Association journal = journal de l'Association medicale canadienne, 189(33), E1065–
E1068. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566606/
10. Morash, M., Mitchell, H., Beltran, H., Elemento, O., & Pathak, J. (2018). The Role of Next-Generation Sequencing in
Precision Medicine: A Review of Outcomes in Oncology. Journal of personalized medicine, 8(3), 30.
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6164147/
References
20
Call Us
(416)-661-2102
(800)-567-5060
Write Us
Dalton Pharma Services
349 Wildcat Rd.
Toronto, ON M3J 2S3
Email Us
bd@dalton.com
Website
https://www.dalton.com/
#DaltonPharmaServices
Peter Pekos
21

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Precision medicine.ppt

  • 1. PRECISION MEDICINE W I T H D A L T O N Peter Pekos an Overview
  • 2. This technical report is intended to provide an overview to key stakeholders including regulatory professionals on precision medicine. This technical report should be read in conjunction with the relevant laws, regulations, and guidance's that apply to your situation. Disclaimer FDA inspected, HC approved, & MRA with EMA 2 "Dalton Pharma Services uses its scientific and pharmaceutical expertise to bring customer ideas to life. We develop their new drug products, optimize the synthesis of therapeutic candidates, and manufacture them at the highest level of quality." Company Vision
  • 3. Precision Medicine Precision medicine is an emerging strategy that considers individual variability in genes, environment, and lifestyle to identify, treat, predict, and prevent disease among patients. Precision medicine has become increasingly feasible due to improved understanding and advancing technologies, such as next-generation sequencing, of individual variability in the human genome. DID YOU KNOW? The global market for precision medicine was valued at 43.6 billion USD in 2016 and is estimated to triple in the next decade. $43.6 b 3
  • 4. The field of molecular biology known as genomics is concerned with the structure, function, evolution, and mapping of genomes. Next-generation sequencing and biomarkers are examples of how genome characteristics are measured and analyzed. Precision medicine uses genomics to identify disease-specific variants or biomarkers in a patient’s genome to determine the best-suited treatment available to them. Genomics 4
  • 5. Next-generation sequencing (NGS) The precise and quick sequencing of genes is made possible by next-generation sequencing technology. Next-generation sequencing works by sequencing fragments of an individual's DNA or RNA molecules and ligating them to adapters, rather than sequencing their full genetic code from scratch. This is then compared to a DNA library that undergoes clonal amplifications and uses algorithms to fill in the blanks. During the procedure, any variations or mutations can be identified. Biomarkers Biomarkers are measurable substances within an organism such as antibodies, thyroid hormone levels, or prostate-specific antigens (PSA), whose presence is indicative that a normal biological process, or a pathogenic process such as disease, infection, or toxicity is taking place within an organism. 5
  • 6. Pharmacogenetics Precision medicine also uses pharmacogenomics (the study of how genes affect a person’s response to particular drugs) to develop effective and safe treatment options that are tailored to the variations in a person’s genes. Precision Medicine vs Personalized Medicine By virtue of its name, the term “personalized medicine” may be easily misinterpreted to mean that every patient can receive completely individualized treatments, which is not the case. Hence, the medical industry is moving away from this term and toward the term “precision medicine,” which more accurately infers a treatment approach that considers an individual’s unique characteristics, such as genetic variability. 6
  • 7. Precision medicine aims to match each individual patient to the appropriate therapies and at the appropriate dose to initiate the desired response. Hence, it is critical to understand the primary causes for variation in response to treatment: pharmacokinetics and pharmacodynamics. Pharmacokinetics (PK) is concerned with the movement of drugs within the body. PK variability includes: •Subject phenotype: weight, body surface area, organ status, age, ethnicity, gender, microbiome •Subject genotype: polymorphisms in metabolizing enzymes or transporters •Disease response or advancement over time •Lifestyle and environmental variables including concomitant medications, diet, and smoking •Adherence to the prescribed course of action, dosage, and medicine formulation. Pharmacodynamics (PD) is concerned with the mechanism of action and effects of a drug. PD variability includes polymorphism in drug target or downstream pathway and driver mutations of disease heterogeneity. Foundation of Precision Medicine 7
  • 8. Therapeutic drug monitoring is also a key component of precision medicine. Therapeutic drug monitoring provides insight into dosage adjustments that may be needed to meet the predefined target exposure in each patient, lowering response variability. Drug doses may be adjusted based on biomarkers such as glucose/glycosylated hemoglobin, cholesterol, prostate- specific antigens, and blood pressure. 8
  • 9. Examples of Precision Medicine as A Treatment Tool •The drug Ivacaftor to treat individuals with cystic fibrosis (CF) who have very specific pathogenic mutations in the gene CFTR. •The use of Primaquine to treat malaria in people who do not have G6PD gene variants. •The use of Imatinib to treat chronic myelogenous leukemia (CML) in patients whose tumor harbors the Abelson proto-oncogene (abl) and breakpoint cluster region (bcr) fusion mutation. 9
  • 10. Abacavir is likely to cause multi-organ system hypersensitivity in persons with HIV infection with the HLA-B*5701 gene. Therefore, it is advised that all patients who are administered Abacavir undergo genetic testing. Example of Precision Medicine as A Predictive Tool Drugs like warfarin, primaquine (PQ), and imatinib that seem to only work without side effects when a patient has a specific genetic profile. Example of Precision Medicine as A Preventative Tool 10
  • 12. Certain gene or protein changes can affect how cancer responds to certain treatments. Therefore, before starting treatment, health care providers may take a biopsy to test the cancer cells for certain gene and protein changes to help determine which treatments are likely to work best. The two types of treatment most commonly used in oncology precision medicine are targeted drug therapy (drugs designed to attack a specific target on cancer cells) and immunotherapy (medicines used to help the body’s immune system attack the cancer). For more on oncology treatments, view our latest whitepaper, Drug Development in Oncology: An Overview. Precision Medicine and Cancer 12
  • 13. •Relies on evidence outside of traditional randomized, drug- centered clinical trials •Absence of concise regulatory guidance •Higher setup costs •Higher medication prices for specific subgroups of patients •Legal, social, and ethical issues •Patency and intellectual property concerns •Privacy, confidentiality, and patient rights concerns All these issues impact safety, effectiveness, and sustainability. DID YOU KNOW? In the US, The Health Insurance Portability and Accountability Act of 1996 (HIPAA) was enacted to ensure that personal medical information stored, accessed, or processed adheres to a set of privacy guidelines. Challenges in Precision Medicine 13
  • 14. Next Step & Opportunities in Precision Medicine •Elevating mechanistic understanding, such as why the body reacts negatively to a treatment and what triggers differences in efficacy •Improving manufacturing capabilities •Further exploring current technologies (i.e., omics including proteomics, metabolomics, and genomics) •Advancing in new technologies (i.e., CRISPR) 14
  • 15. The emergence and evolving field of precision medicine necessitate that global regulatory bodies adopt an integrated policy framework that balances the needs of patients, industry, and science without impeding the development of this revolutionary sector. This may entail adopting new approaches to product approval. Although regulatory guidance among global regulators is still in development, the FDA provides can serve as an example on how to approach precision medicine. As the FDA and other health authorities continue to develop clearer regulatory pathways in precision medicine, life sciences industries must prepare to quickly adopt shifts in regulations related to precision medicine. Regulatory 15
  • 16. In 2015, precisionFDA was introduced - a cloud-based site for community research and development that enables users from across the globe to share data and tools to test, pilot, and validate existing and novel bioinformatics approaches to next-generation sequencing processing. In 2020, the FDA published several guidance documents on the manufacturing and clinical development of gene and cell-based therapeutic products, which provided updated guidance on the process to obtain approval for the commercialization of new therapeutics, including when and under what circumstances the use of a new drug must be preceded and/or accompanied by a diagnostic or screening test. In 2021, the FDA provided further clarity on developing new drug products in the age of individualized medicine, specifically for the development of antisense oligonucleotide (ASO) products, as it is the most advanced individualized genetic drug products thus far, by releasing a new draft guidance on investigational new drug (IND) submissions for individualized ASO drug products. The CDER has also been developing infrastructure programs and review capacity to be on the leading edge of precision medicine initiatives. 16
  • 17. At Dalton we can help with drug innovation through our cGMP APIs. Our skilled scientists can support your drug discovery process through API synthesis for all stages of pre-clinical and clinical trials as well as small scale commercial manufacturing. We provide integrated process development, API manufacturing and finished dose manufacturing at a single location with the expertise required for developing a process that is robust, transferable, and scalable to meet your requirements. We bring over 35 years of experience developing products for our clients that are compliant, transferable, and scalable. Dalton's Services 17
  • 18. Our API development services include: •Lead identification •Synthetic route development •Feasibility studies & tech transfer •Process optimization & scale-up •Scale-up troubleshooting •Engineering batches •cGMP API manufacturing 18
  • 19. For more information on services we provide, visit our website. Dalton is Health Canada licensed to manufacture, test, and package complex pharmaceutical products for global markets. US FDA inspected; Dalton manufactures commercial products for the USA. The MRA (Mutual Recognition Agreement), recognizes Health Canada Licensed facilities in seven countries. 19
  • 20. 1. FDA. (2022). Focus Area: Individualized Therapeutics and Precision Medicine. Food and Drug Administration. https://www.fda.gov/science-research/focus-areas-regulatory-science-report/focus-area-individualized-therapeutics-and-precision-medicine 2. FDA. (2021). FDA Takes Steps to Provide Clarity on Developing New Drug Products in the Age of Individualized Medicine. Food and Drug Administration. https://www.fda.gov/news-events/press-announcements/fda-takes-steps-provide-clarity-developing-new- drug-products-age-individualized-medicine 3. Health IT Analytics. (2020). What Are Precision Medicine and Personalized Medicine? https://healthitanalytics.com/features/what-are-precision-medicine-and-personalized-medicine 4. Goetz, L. H., & Schork, N. J. (2018). Personalized medicine: motivation, challenges, and progress. Fertility and sterility, 109(6), 952–963. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366451/ 5. Akhoon N. (2021). Precision Medicine: A New Paradigm in Therapeutics. International journal of preventive medicine, 12, 12. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8106271/ 6. American Cancer Society. (2022). Precision or Personalized Medicine. https://www.cancer.org/treatment/treatments-and-side- effects/treatment-types/precision-medicine.html 7. RAPS. (2016). Precision Medicine: Technology, Regulations and Challenges. Regulatory Affairs Professional Society. https://www.raps.org/regulatory-focus%E2%84%A2/news-articles/2016/3/precision-medicine-technology,-regulations-and-challenges 8. PMC. (2020). Personalized medicine at FDA - The Scope & Significance of Progress in 2020. https://www.mastercontrol.com/gxp-lifeline/3-ways-to-rethink-regulatory-change-in-personalized-medicine/ LINK WITHIN 9. McAlister, F. A., Laupacis, A., & Armstrong, P. W. (2017). Finding the right balance between precision medicine and personalized care. CMAJ: Canadian Medical Association journal = journal de l'Association medicale canadienne, 189(33), E1065– E1068. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566606/ 10. Morash, M., Mitchell, H., Beltran, H., Elemento, O., & Pathak, J. (2018). The Role of Next-Generation Sequencing in Precision Medicine: A Review of Outcomes in Oncology. Journal of personalized medicine, 8(3), 30. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6164147/ References 20
  • 21. Call Us (416)-661-2102 (800)-567-5060 Write Us Dalton Pharma Services 349 Wildcat Rd. Toronto, ON M3J 2S3 Email Us bd@dalton.com Website https://www.dalton.com/ #DaltonPharmaServices Peter Pekos 21