1. Table 1. Binding sites selected in vitro by Myb 126:
representative sample derived from 89 sequences
ACI: ACCTACC: 30
gaggaggagggGAGAGATCGACCTACCGTTGTGCACgcttttctcg 1b.U
cagatcggaggaggagggCCACCTACCAAACAGCTCGACTCGGCAg 5b.T7
gaggaggagggGGGCGCCGGACCTACCAAATAGAATGACTCgcttt 6b.T7
cattgggcgagaaaagcGCCACCTACCGGTCCAGAGGTCACGTAcc 7a.U
atcggaggaggagggGATTCACCTACTTTTTTTTAAACAGATgctt 9b.T7
acattgggcgagaaaagcTCACCTACTTTTGTGTAACTTGTGTCcc 18a.U
gaggaggagggGCGCCCCCCACCTACCAGGGCTTCTCCgcttttct 29.U
ggagggCTGAGCGCAGTTTCACCCACCGCAATAgcttttctcgccc 38.U
ggaggaggagggCATTTTCCACCTACCGAAAATACCTCAgcttttc 52.T7
agatcggaggaggagggGCCACCTACCAGCTTCCGACCCACAGGgc 55.T7
agatcggaggaggagggACCACCTACCAGCTTCCGACCCTGACCgc 59.U
ACAAAATAGCCGCGAGCCCCACCTACCgcttttctcgcccaatgt 81.T7
attgggcgagaaaagcACTCACCTACTTGTTGTTCAGCGTATccct 82.T7
ATACGTCTCAACCAGCTCCCACCTACCgcttttctcgcccaatgt 87.U
cggaggaggagggGGTATCTACCTACCGCCCGACGCCAGGgctttt 92.U
gCTTACGCGGGCGAACCGCTACCTACCGgcttttctcgcccaatgt 19.U.2
gcgagaaaagcACCAGTGCTACCTACTTTTATGTTGGCCCCccctc 24.R2.3
agggTAAGAAATATAAATCGACCTACCTCTgcttttctcgcccaat 24.R2.4
aggaggagggCAAACATTTCACCTACTTTGTATCCTTgcttttctc 37.U.1
CCCCGCACCGGAAAATTCCCACCTACCgcttttctcgcccaatgt 37.U.2
gcgagaaaagcTGAGGCTCTACCTACCATCGCGTTATAccctcctc 40.U.2
aggagggCCAGGATGATTCTACCTACCGTGTGGAgcttttctcgcc 40.U.3
acattgggcgagaaaagcTACCTACCGCTTGAGATCCTTCGTATG 47.R2.1
gaggagggGGTTCAATCTCTACCTACCGCCAGGACgcttttctcgc 48.U.1
ATAAACGGAACCACATTCTCACCTACCgcttttctcgcccaatgt 58.U.2
GAAAGGGACTAGGCATTTCTACCTACCGgcttttctcgcccaatgt 61.U.1
tcggaggaggagggCATCATACCTACCAGGAAGAACATCATgcttt 61.U.2
atcggaggaggagggTAGCCACCTACCGCAGCCGCAACCCGgcttt 65.R2.2
gCGACATTAACCCCCCCTCCACCTACCAgcttttctcgcccaatgt 72.U.1
atcggaggaggagggGCCCCACCTACCGGGAGAAAGACACGTgctt 74.R2.2
ACII:ACCAACC: 3
cggaggaggagggACCGTCCACCAACCGCTAAAAGCCGTCgctttt 4b.U
ggaggaggagggTGATCCCCACCAACCCGGGGTTACTCCgcttttc 7b.U
gagggGTCCCGCCCTTCCCCACCAACCGCCACgcttttctcgccca 64.R2.3
ACIII: ACCTAAC: 4
ggagggGGAGTACTTTACTTACCCAACAAGTACgcttttctcgccc 16b.U
gaggagggCAACATACTTTTACCTAACTCCCCCAGgcttttctcgc 37.T7
acattgggcgagaaaagcTACCTAACTTTTTATTGGTGATCCTTc 8.U.1
gggGTAAGAAATATAAATCCACCTAACTCTgcttttctcgcccaat 33.R2.2
Complex Sequences:
cagatcggaggaggagggCACCCACCACAGTCCGCTCCACCTACC 8.U.2
CATCAACACACTACCAACCCACCTACCgcttttctcgcccaatgt 47.U.1
tcggaggaggagggGGACCTACCTACCATCCACTGTGGCCCgcttt 19.R2.2
gagggCCCAGCACCAATCTCACCTACCAGTACgcttttctcgccca 66.U.2
gaggaggagggTCCATACCTACCAACCGACTCAAAACCgcttttct 88.U
gagggAGGAAAGAACCACCCACCTAACCTGGAgcttttctcgccca 30.U
Tables 1 and 2. DNAs recovered after five rounds of selection
with Myb 126 or 413. Conserved regions appear in bold and were
detected in 100% of the sequenced DNAs. DNAs with more than
one conserved region (complex sequences) were grouped
separately. Lowercase bases in each DNA indicate PCR primer
annealing regions.
ACI: ACCTACC:17
cggaggagggTCAGGGAGTCTACCTACCACATTATCCgcttttctcg 4b.T3.1
gggCAAGGGAACAAGAAACTTACCTACCGTgcttttctcgcccaatg 5b.T7.2
AACCCAAAAACCCGCGGACACACCTACCgcttttctcgcccaatgt 50.T3.1
aggaggagggATAGAAACTGTACCTACCGCCCGCGCCgcttttctcg 52.T3.1
gagaaaagcAGAGATTTTCTTACCTACTTTCCGGCccctcctcctcc 66.T7.2
gGATCATACAAATAAAAGGACACCTACCgcttttctcgcccaatgt 73.T3.2
gaggagggATACCTTGGACTCACCTACCACTCCATgcttttctcgcc 86.T7
ggagaaaagcTGAAATTCTCTACCTACCGGTCCCCCccctcctcctc 138.U
atcggaggaggagggCATCCCACCTACCGCCACACTAAGACAgcttt 48.U.2
GCAGCTGGCTCCCCAAAACGCACCTACCgcttttctcgcccaatgt 49.U.3
GACACCCAAACAGCTTATTCCACCTACCgcttttctcgcccaatgt 85.R2.3
acattgggcgagaaaagcTTACCTACCATATGCGATTGCCCGCTTc 90.U.1
tcggaggaggagggCACCCTCACCTACCATCCCAACGACTAgctttt 95.R2.1
gaggaggagggCTCAAATCACACCTACCGTGCATGCAGgcttttctc 101.U.2
GCCAAAAAAAGCACAACCCACACCTACCgcttttctcgcccaatgt 101.R2.1
ggaggaggagggCACGACCATACCTACCACAATGACAAGgcttttct 105.U.2
ggagggGCCCCCATGCACGCCACCTACCGCCACgcttttctcgccca 117.U.2
ACII: ACCAACC: 12
gaggaggagggGCATAAGTCCACCAACCGCACGGCCATgcttttctc 1a.T7
GAGCATGAGAATAACTGACTCACCAACCgcttttctcgcccaatgt 11b.T7.1
GAAAGGAGTACAACAGCAGGTACCAACCgcttttctcgcccaatgt 50.T3.2
agggCAACATATACAAAACTCACCAACCGGTgcttttctcgcccaat 58.U.2
cgagaaaagcTCGGTTTTTTTACCAACCGCCGCGCCTccctcctcct 73.T3.1
ggagggCGCCAAACTAATTTCACCAACCACCGCgcttttctcgccca 117.U
tcggaggagggCAATGACTGCACCAACCGCTCCTGCGCgcttttctc 48.R2.2
agggCACACCCGCTTCCATTTACCAACCACCgcttttctcgcccaat 49.U.2
GTGATCTTACATAAGGAGTGCACCAACCgcttttctcgcccaatgt 50.U.1
ggaggaggagggGCATACGCTACCAACCGCCCGTGCATgcttttctc 72.R2.1
ACAGCATACAGACCCTAGCCACCAACCgcttttctcgcccaatgt 95.U.1
gaggaggagggTCAAACACACACCAACCGCCGCCGTCAgcttttctc 105.R2.2
ACIII: ACCTAAC:18
ggGCTGACTGCTATATTTCCCACCTAACCGgcttttctcgcccaatg 11b.T7.2
cgagaaaagcTGATCCCGTCTACCTAACGATGTGGCTccctcctcct 17b.T7.2
aggaggagggAGGGGATCCGCACCCAACGGTTAGGTAgcttttctcg 20b.T3.3
ggaggagggCCAAAGAAACGTACCTAACTCAAACGCgcttttctcgc 16a.U
tgggcgagaaaagcACTTTTCACCTAACTTCTTGCAATCTCccctcc 22a.T7.2
aaagcCGCTGAGGTTCTGCGTACCTAACGCTTCccctcctcctccga 26.T7.2
GAACGGACAACACAAAAAGCTACCTAACgcttttctcgcccaatgt 33.T7.2
cggaggagggAGCTATATGCCACCTAACACATAGATgcttttctcgc 59.T7.2
aggagggTGTCAACTAATCCTACCTAACGCTACgcttttctcgccca 69.T3.1
atcggaggaggagggAAGCCCACCTAACAAGCCGCTGTTCACgcttt 50.R2.2
gaggaggagggCGAAGATCCCACCTAACGCCCAAAGTCgcttttctc 72.R2.2
gGCAGCACGCGCTACTACCCCACCTAACgcttttctcgcccaatgt 75.R2.2
acattgggcgagaaaagcTACCTAACTTTGTCTTCGTCTTTGGAA 87.R2.1
cggaggaggagggTCTCCCGTACCTAACATGAAACACGTCgcttttc 98.R2.2
aggagggCAAGATAAAATCCCACCTAACCTAAAGgcttttctcgccc 114.R2.2
gggcgagaaaagcTTATGTGTACCTAACGGCTGCGGGGCAccctcct 114.U.1
aggaggagggAAACAAACCCCACCTAACTAGTTAAAAgcttttctcg 115.R2.2
gGTATAATAAAGGAACGGCCCACCTAACgcttttctcgcccaatgt 117.U.1
Complex Sequences:
GGTCTGCACCAATCAACACCCACCTACCgcttttctcgcccaatgt 66.U.1
ggGGGACCATAACCAATCTCTACCTACCGgcttttctcgcccaatgt 11a.U
ggagggGGACCCGGTGCAAATACCCACCTACCGgcttttctcgccca 65.T7.2
ggaggaggagggCGTACTGCCACCAACCACCTAATTCCAgcttttct 5.R2.2
cagatcggaggaggagggGTACCTAACATATCTACCAACCACGGTg 9.R2.1
tcggaggaggagggGCGCCACACCTAAGACAACCACCAACCgctttt 106.R2.1
aggagggGGGGTAAAAAACCTACCTAACCGATGAgcttttctcgccc 5a.T7.2
Table 2. Binding sites selected in vitro by Myb 413:
representative sample derived from 112 sequences