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An innovative germline DNA test which predicts genetic
susceptibility to severe 5FU/capecitabine toxicity
ToxNav workflow steps 1–7:
2 3
4 5
6 7
•	Patients offered fluoropyrimidine
chemotherapy
•	ToxNav test requested
by clinician
•	Blood sample taken (EDTA)
•	Sample requisition form and
blood sample sent to laboratory
•	Sample and requisition form
received and logged by laboratory
•	DNA extracted
•	Sanger sequencing carried out to
detect genotype of 21 variants
•	Data managed via secure server
•	Results transmitted from lab to
OCB analysis suite
•	Data imported to ToxNav software
•	ToxNav Report received
by clinician and risk
category discussed
with patient
•	Personalised
chemotherapy
decision made
Phenotype (genotype) Implications for treatment Dosing recommendations
Homozygous for wild-type allele, or
normal, high DPYD activity
Normal DPYD activity “normal” risk
for toxicity
Use label-recommended dosage and
administration
Heterozygous, or intermediate activity
Decreased DPYD activity increased risk
for severe or even fatal drug toxicity
Start with at least a 50% dose
reduction, followed by titration
of dose based on toxicity or
pharmacokinetic test
Homozygous, or deficient activity
Complete DPYD deficiency increased
risk for severe or even fatal drug toxicity
Select alternative drug
1
Recommended dosing of fluoropyrimidines based on genotype or DPYD activity (adapted from Caudle et al, 2013)1
.
References:
1.	Caudle KE et al. Clinical Pharmacogenetics Implementation Consortium guidelines for dihydropyrimidine dehydrogenase genotype and fluoropyrimidine dosing. Clin Pharmacol
Ther. 2013 Dec; 94 (6): 640-5
2.	Kerr et al., Adjuvant capecitabine plus bevacizumab versus capecitabine alone in patients with colorectal cancer (QUASAR 2): an open-label, randomised phase 3 trial. Lancet
Oncol 2016; 17(11): p. 1543-1557.
3.	Rosmarin et al., Genetic Markers of Toxicity from Capecitabine and Other Fluorouracil-Based Regimens: Investigation in the QUASAR2 Study, Systematic Review, and Meta-
Analysis, J Clin Oncol 2014; 32 (10): 1031-39
4.	Rosmarin et al., A candidate gene study of capecitabine-related toxicity in colorectal cancer identifies new toxicity variants at DPYD and a putative role for ENOSF1 rather than
TYMS. Gut. 2015; 64(1):111-20.
5.	ESMO 2018 abstract: Palles et al., An evaluation of the clinical utility of a panel of variants in DPYD and ENOSF1 for predicting common Capecitabine related toxicities.
6.	Deenen MJ et al. Upfront Genotyping of DPYD*2A to Individualize Fluoropyrimidine Therapy: A Safety and Cost Analysis. J Clin Oncology 2016; 34 (3):227-234
7.	NHS Outcomes Framework: at-a-glance. Department of Health 2016.
What is ToxNav?
	A comprehensive panel of 21 genetic variants associated with 5FU/capecitabine toxicity
in the DPYD and TYMS/ENOSF1 genes2
	 •	Includes variants not found in other panels:
	 – Variants found at a relatively low population frequency linked to severe (Grade 4)
toxicities that may have fatal consequences
	 – Hand Foot Syndrome
	 •	Uses the proprietary ToxNav algorithm to determine patient risk category
	 •	Panel derived from meta-analysis of all published genes associated with 5FU
toxicity (n=4,855)3,4
	Developed using QUASAR 2 clinical trial samples and data set2
	 •	Well-documented toxic effects using CTCAE classifications
What does ToxNav do?
	Stratifies patients into risk groups based on their individual genotype
	100% specificity for identification of people likely to die from 5FU/capecitabine toxicity5
	Identifies risk of Grade 4 haematological toxicities with a high degree of accuracy
(98% specificity, 75% sensitivity, NPV 1, PPV 0.14)5
Why use ToxNav?
	Comprehensive panel of genetic variants providing optimum detection in general population
	Clinical validation5
in 888 colorectal patient samples from a large scale clinical trial2
	Could save 10 lives in every 1,000 patients tested
	Potential savings of £2,500 per patient who avoids Grade 3+ toxicities6
	Meets patient safety and enhanced patient experience standards (NHS Outcomes Framework)7
A novel assay to predict 5FU/capecitabine toxicity

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ToxNav

  • 1. An innovative germline DNA test which predicts genetic susceptibility to severe 5FU/capecitabine toxicity ToxNav workflow steps 1–7: 2 3 4 5 6 7 • Patients offered fluoropyrimidine chemotherapy • ToxNav test requested by clinician • Blood sample taken (EDTA) • Sample requisition form and blood sample sent to laboratory • Sample and requisition form received and logged by laboratory • DNA extracted • Sanger sequencing carried out to detect genotype of 21 variants • Data managed via secure server • Results transmitted from lab to OCB analysis suite • Data imported to ToxNav software • ToxNav Report received by clinician and risk category discussed with patient • Personalised chemotherapy decision made Phenotype (genotype) Implications for treatment Dosing recommendations Homozygous for wild-type allele, or normal, high DPYD activity Normal DPYD activity “normal” risk for toxicity Use label-recommended dosage and administration Heterozygous, or intermediate activity Decreased DPYD activity increased risk for severe or even fatal drug toxicity Start with at least a 50% dose reduction, followed by titration of dose based on toxicity or pharmacokinetic test Homozygous, or deficient activity Complete DPYD deficiency increased risk for severe or even fatal drug toxicity Select alternative drug 1 Recommended dosing of fluoropyrimidines based on genotype or DPYD activity (adapted from Caudle et al, 2013)1 .
  • 2. References: 1. Caudle KE et al. Clinical Pharmacogenetics Implementation Consortium guidelines for dihydropyrimidine dehydrogenase genotype and fluoropyrimidine dosing. Clin Pharmacol Ther. 2013 Dec; 94 (6): 640-5 2. Kerr et al., Adjuvant capecitabine plus bevacizumab versus capecitabine alone in patients with colorectal cancer (QUASAR 2): an open-label, randomised phase 3 trial. Lancet Oncol 2016; 17(11): p. 1543-1557. 3. Rosmarin et al., Genetic Markers of Toxicity from Capecitabine and Other Fluorouracil-Based Regimens: Investigation in the QUASAR2 Study, Systematic Review, and Meta- Analysis, J Clin Oncol 2014; 32 (10): 1031-39 4. Rosmarin et al., A candidate gene study of capecitabine-related toxicity in colorectal cancer identifies new toxicity variants at DPYD and a putative role for ENOSF1 rather than TYMS. Gut. 2015; 64(1):111-20. 5. ESMO 2018 abstract: Palles et al., An evaluation of the clinical utility of a panel of variants in DPYD and ENOSF1 for predicting common Capecitabine related toxicities. 6. Deenen MJ et al. Upfront Genotyping of DPYD*2A to Individualize Fluoropyrimidine Therapy: A Safety and Cost Analysis. J Clin Oncology 2016; 34 (3):227-234 7. NHS Outcomes Framework: at-a-glance. Department of Health 2016. What is ToxNav? A comprehensive panel of 21 genetic variants associated with 5FU/capecitabine toxicity in the DPYD and TYMS/ENOSF1 genes2 • Includes variants not found in other panels: – Variants found at a relatively low population frequency linked to severe (Grade 4) toxicities that may have fatal consequences – Hand Foot Syndrome • Uses the proprietary ToxNav algorithm to determine patient risk category • Panel derived from meta-analysis of all published genes associated with 5FU toxicity (n=4,855)3,4 Developed using QUASAR 2 clinical trial samples and data set2 • Well-documented toxic effects using CTCAE classifications What does ToxNav do? Stratifies patients into risk groups based on their individual genotype 100% specificity for identification of people likely to die from 5FU/capecitabine toxicity5 Identifies risk of Grade 4 haematological toxicities with a high degree of accuracy (98% specificity, 75% sensitivity, NPV 1, PPV 0.14)5 Why use ToxNav? Comprehensive panel of genetic variants providing optimum detection in general population Clinical validation5 in 888 colorectal patient samples from a large scale clinical trial2 Could save 10 lives in every 1,000 patients tested Potential savings of £2,500 per patient who avoids Grade 3+ toxicities6 Meets patient safety and enhanced patient experience standards (NHS Outcomes Framework)7 A novel assay to predict 5FU/capecitabine toxicity