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LakePharma’s CHO-GSN Platform for
Stable Cell Line Generation
June 14, 2016
Hua Tu, Ph.D.
hua.tu@lakepharma.com
Development Goal
Objectives
• CHO line with documentation and FTO to support
commercial manufacturing
• High yield  3 gram per liter for antibody
• Fast timeline
• Consistency in performance
Approach
• GS selection on a CHO GS knockout line
1
History of CHO-GSN Host Cells
Parental CHO K1 stock cells
obtained by LP partner
Knock-out of GS allele 1 by LP
partner (CHO GS -/+)
Knock-out of GS allele 2 by LP
partner (CHO GS -/-)
Suspension growth and adaptation
Characterization of CHO GS-/- and
banking of CHO GS -/-
• Cells were analyzed using Infectious Microbe PCR AmplifiCation
Test (IMPACT) test panels I and III that aim to detect a wide range
of human or other pathogens
• Results were negative for all infectious agents
• Via rAAV technology, both alleles of the catalytic domain of the
Glutamine Synthetase (GS) enzyme were deleted
• Removal of the GS gene was confirmed both genetically and
phenotypically
• Validation by reversion test when a functional gene copy of GS
was restored by transfection
2
Stable Cell Line Generation Process
Target
DNA
GS Stable
Vector
Transfect
CHO
(MaxCyte)
GS Selection
(MSX)
CHO Stable
Pool
Subclones
CHO Stable
Clones
RCB
1 ~ 2 weeks 5 weeks
10 weeks
Production
Run
(+3 weeks)
10 weeks
Production
Run
(+2 weeks)
Production
Run
(+2 weeks)
3
Case Study 1: CHO-GSN Pool and Clones of An Antibody
• HEK293 transient titer is 0.24 g/L
• CHO-GSN pool titer is 1.3 g/L
• Best clone titer is 4.5 g/L
4
mAb Titer Profile
Case Study 2: CHO-GSN vs. CHO-K1 of Fc-fusion
• GSN is the LP adapted suspension and
serum free CHO GS -/-
• CHO-K1 is the parental cell line (no
knock-out, suspension)
• There is significant increase in titer
when using the knockout line and even
more increase when single cell cloning
is performed
Day
CHO-K1
pool
titer
0 1.35
3 2.49
5 4.5
7 7
10 9.8
12 13.8
14 15.7
17 20.4
5
Fc-fusion Titer
Case Study 3: CHO-GSN Producing A Bispecific Antibody
• A bispecific antibody does not contain Fc
• Titer quantification by Octet sensors
• Product related variants presented
challenges in single cell cloning
• Through method development and custom
screening approach, LakePharma was
successful in generating a cell line expressing
the bispecific antibody
6
Bispecific A Titer
4C2 3A6
Stable CHO-GSN Pools Have Higher Titer Than Transient
0
200
400
600
800
1000
1200
1400
1600
0 50 100 150 200 250 300
CHO-GSNPoolYield(mg/L)
Transient Yield (mg/L)
7
Case Study 4: Stability of Cell Line Producing an Antibody
PDL Antibody Yield (mg/L)
10 892
28 960
60 920
90 1007
@ PDL 28
@ PDL 90
1
min0 2.5 5 7.5 10 12.5 15 17.5 20 22.5
mAU
0
20
40
60
80
2
min8 10 12 14 16 18
2mAU
0
100
200
300
400
1
CE-SDS SE-HPLC
8
Case Study 5: Antibody Productivity Correlates with
Gene Copy Numbers of Both Heavy and Light Chains
• Copy Number is Determined by qPCR Method
Standard Curve with Reference Gene
Slope: -3.325 R2: 0.999
9
Highlights of LakePharma’s CHO-GSN Platform
10
• Complete cell line lineage and documentation; freedom to operate
• In-house proprietary cell lines and vectors
• MaxCyte electroporation
• High yield can be obtained at stable pool stage
• Reduce the need to screen large number of clones for high yield
• Start to finish RCB in 6 months
• Proven success with difficult proteins
Additional Services Related to CHO-GSN Platform
Release
Testing
Sterility,
mycoplasma, copy
number, and viral
testing
Stability
Studies
Stability over 80
generations
Scale-up
Productions
Large scale
bioreactor capacity
Bioreactor
Processing
Development
Process
optimization, scale
down and scale up
11

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LakePharma’s CHO-GSN Platform for Stable Cell Line Generation

  • 1. LakePharma’s CHO-GSN Platform for Stable Cell Line Generation June 14, 2016 Hua Tu, Ph.D. hua.tu@lakepharma.com
  • 2. Development Goal Objectives • CHO line with documentation and FTO to support commercial manufacturing • High yield  3 gram per liter for antibody • Fast timeline • Consistency in performance Approach • GS selection on a CHO GS knockout line 1
  • 3. History of CHO-GSN Host Cells Parental CHO K1 stock cells obtained by LP partner Knock-out of GS allele 1 by LP partner (CHO GS -/+) Knock-out of GS allele 2 by LP partner (CHO GS -/-) Suspension growth and adaptation Characterization of CHO GS-/- and banking of CHO GS -/- • Cells were analyzed using Infectious Microbe PCR AmplifiCation Test (IMPACT) test panels I and III that aim to detect a wide range of human or other pathogens • Results were negative for all infectious agents • Via rAAV technology, both alleles of the catalytic domain of the Glutamine Synthetase (GS) enzyme were deleted • Removal of the GS gene was confirmed both genetically and phenotypically • Validation by reversion test when a functional gene copy of GS was restored by transfection 2
  • 4. Stable Cell Line Generation Process Target DNA GS Stable Vector Transfect CHO (MaxCyte) GS Selection (MSX) CHO Stable Pool Subclones CHO Stable Clones RCB 1 ~ 2 weeks 5 weeks 10 weeks Production Run (+3 weeks) 10 weeks Production Run (+2 weeks) Production Run (+2 weeks) 3
  • 5. Case Study 1: CHO-GSN Pool and Clones of An Antibody • HEK293 transient titer is 0.24 g/L • CHO-GSN pool titer is 1.3 g/L • Best clone titer is 4.5 g/L 4 mAb Titer Profile
  • 6. Case Study 2: CHO-GSN vs. CHO-K1 of Fc-fusion • GSN is the LP adapted suspension and serum free CHO GS -/- • CHO-K1 is the parental cell line (no knock-out, suspension) • There is significant increase in titer when using the knockout line and even more increase when single cell cloning is performed Day CHO-K1 pool titer 0 1.35 3 2.49 5 4.5 7 7 10 9.8 12 13.8 14 15.7 17 20.4 5 Fc-fusion Titer
  • 7. Case Study 3: CHO-GSN Producing A Bispecific Antibody • A bispecific antibody does not contain Fc • Titer quantification by Octet sensors • Product related variants presented challenges in single cell cloning • Through method development and custom screening approach, LakePharma was successful in generating a cell line expressing the bispecific antibody 6 Bispecific A Titer 4C2 3A6
  • 8. Stable CHO-GSN Pools Have Higher Titer Than Transient 0 200 400 600 800 1000 1200 1400 1600 0 50 100 150 200 250 300 CHO-GSNPoolYield(mg/L) Transient Yield (mg/L) 7
  • 9. Case Study 4: Stability of Cell Line Producing an Antibody PDL Antibody Yield (mg/L) 10 892 28 960 60 920 90 1007 @ PDL 28 @ PDL 90 1 min0 2.5 5 7.5 10 12.5 15 17.5 20 22.5 mAU 0 20 40 60 80 2 min8 10 12 14 16 18 2mAU 0 100 200 300 400 1 CE-SDS SE-HPLC 8
  • 10. Case Study 5: Antibody Productivity Correlates with Gene Copy Numbers of Both Heavy and Light Chains • Copy Number is Determined by qPCR Method Standard Curve with Reference Gene Slope: -3.325 R2: 0.999 9
  • 11. Highlights of LakePharma’s CHO-GSN Platform 10 • Complete cell line lineage and documentation; freedom to operate • In-house proprietary cell lines and vectors • MaxCyte electroporation • High yield can be obtained at stable pool stage • Reduce the need to screen large number of clones for high yield • Start to finish RCB in 6 months • Proven success with difficult proteins
  • 12. Additional Services Related to CHO-GSN Platform Release Testing Sterility, mycoplasma, copy number, and viral testing Stability Studies Stability over 80 generations Scale-up Productions Large scale bioreactor capacity Bioreactor Processing Development Process optimization, scale down and scale up 11