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Putting chemistry into the hands of
 students – chemistry made mobile
         using resources from RSC

Antony Williams, Valery Tkachenko, Alexey Pshenichnov,
                             Will Russell and Alex Clark
                                ACS Philadelphia August 2012
Mobilizing Chemistry and
                      “Generation App”
 Chemistry has gone Mobile..
   Read Publications
   Access databases
   Perform calculations
   Draw chemicals
   Retrieve reactions
   Tap into the ever-increasing cloud of data…

   For students “Chemistry in the Hand” is to be
    expected….
Scientific Publishers Apps
 Scientific publishers release apps to:

   Provide mobile access to content

   Search and deliver content to its registered users
    and engage other possible users

   Greater accessibility means greater readership

   Revenue generation from the content, not the app
RSC Mobile
Chemistry World
Data and Chemical Dictionaries
 Apps are ideal for delivering reference data

 Data collections include
   Elements
   Lists of chemicals
   Drugs and Medications

 Public domain data delivered via App interfaces
  OR via Mobile-Optimized websites. Or Linked…
RSC|ChemSpider
RSC|ChemSpider
 Structure entry as an entry point to:
   Calculations (formula, mass)
   Predictions (local or server-based)
      Systematic name generation, logP, pKa, NMR
       prediction, etc.
   Database lookup
      On device dictionaries (because space doesn’t
       matter!)
      Internet-hosted databases (because the latest
       content does matter)
ChemSpider Mobile Website
ChemSpider Mobile
Chemical Structure Drawing
Open in Browser
Infrastructure Architecture
ChemGoggles
ChemGoggles
Chemical Reactions
 Chemical reactions can be served up on mobile

 What is available now?
   Teaching basics of chemical reactions
   Look-ups against reaction databases
   Reaction mechanisms
Reaction101
http://molmatinf.com/reaction101.html
Reaction Database Look-up
Reaction Database Look-up
Work in Progress – 300k Reactions
Spectra on ChemSpider
SpectraSchool on Learn Chemistry
Spectral Display
 Mobile devices with Java support can use
  JSpecView

 iOS devices require Javascript widgets/HTML5
  components
ChemDoodle Web Components
 An open-source and free HTML5 toolkit.
 For desktop and mobile browsers.
SpectralGame in the hand
SpectraSchool http://spectraschool.rsc.org/
Lab Experiments
Sourcing information about SciApps

 So, there are lots of Science Apps

 Different platforms, different versions

 How do you find them?

 Where can developers post information about
  their apps? NOT Wikipedia!
Sourcing information about SciApps
http://www.scimobileapps.com/


 Where can developers post information about
  their apps? NOT Wikipedia!

 iTunes does not segregate based on science

 SciMobileApps Wiki…
There’s a lot of Mobile Chemistry!
 Categorization of chemistry apps.
SciMobileApps Wiki
Chemistry eBooks
 The future of the Chemistry eBook…next year then?

   eBooks already link to computational engines
   3D rotating molecules are expected – stereoscopic
    viewing will become standard?
   Kinect type interface for a tablet?
   Interactive graphing – data mine public websites to
    include data
   Direct model generation and prediction
   And….
Conclusions
 How many students do not have smartphones?
 How long before Tablets are primary computers?
 Chemistry apps are commonplace

 The near future is tomorrow….
    Federated data access
    More creative tools for collaboration
    Hopefully more crowdsourced participation in
     mobile-enabled curation and annotation
Acknowledgments
 RSC Cheminformatics team – Mobile
  ChemSpider; Dmitry Ivanov – ChemGoggles
 Alex Clark – ChemSpider Mobile
 JC Bradley, Andy Lang, Bob Lancashire –
  SpectralGame
 Kevin Thiesen – ChemDoodle
 ACD/Labs – SpectraSchool HTML5 NMR Display
 Daniel Lowe – Chemical reactions dataset
 Sean Ekins – SciMobileApps wiki
Mobile Tools in Drug Discovery
New Papers this month
LINK TO ARTICLE




LINK TO ARTICLE
Thank you

Email: williamsa@rsc.org
Twitter: ChemConnector
Personal Blog: www.chemconnector.com
SLIDES: www.slideshare.net/AntonyWilliams

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Putting chemistry into the hands of students – chemistry made mobile using resources from the Royal Society of Chemistry