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Distribution Free vs.
      Non-distribution Free Methods in
               Factor Analysis
                      Nicola Ritter, M.Ed.
                EPSY 643: Multivariate Methods



                                                                                                          1
This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License.
Top 5 Take Away Points
1. Extracted factors from a covariance matrix are a
   function of correlations and standard deviations.
2. Different factors may be extracted based on the
   matrix of associations selected.
3. Correlational statistics represented in matrices
   address different questions.
4. Factors are sensitive to the information available
   in a given correlation statistic.
5. Factors are extracted from a matrix of
   associations.

                                                    2
5. Factors are extracted from a matrix
            of associations.
• Scores on measured variables are used to
  compute matrices of bivariate associations.
• i.e. Covariance matrix or correlation matrix
Even given only a matrix of associations, all
  steps in factor analysis can be completed
  (except for calculating the factor scores).
                            VAR1   VAR2   VAR3   VAR4   VAR5   VAR6
                     VAR1    1
                     VAR2           1
                     VAR3                  1
                     VAR4                         1
                     VAR5                                1
                     VAR6                                       1
                                                                      3
What are the different types of
   correlation statistics?




                                  4
4. Factors are sensitive to the information
  available in a given correlation statistic.
               Bivariate Correlation Coefficients




continuous       rpb                                   r

      rank                               ρ

categorical      Ф                                    rpb

              nominal              ordinal          interval
                                                               5
Pearson r Correlation Matrix
• Most commonly used in EFA
• Default in most statistical packages




                                         6
Pearson’s r vs. Spearman’s rho
            Pearson’s r                         Spearman’s ρ
   • Variables are intervally           • Variables are at least
     scaled                               ordinally scaled.




If the data are intervally scaled, either correlation coefficient could be used.




                                                                          7
Which correlation coefficient do
           we use?




                                   8
Pearson r Assumption
Participant    X      x̄     x      Y      Ybar    y      xy

    1          3      4.0   -1.0    3      33.0   -30.0   30.0
    2          4      4.0   0.0     4      33.0   -29.0   0.0
    3          5      4.0   1.0     92     33.0   59.0    59.0
   Sum        12.00                99.00                  89.0
  Mean        4.00                 33.00
    SD        1.00                 51.10
   COV        44.50
     r        0.87

                                                                 9
Spearman rho Assumption
Participant    X     x̄     x      Y     Ybar    y     xy

      1        1     2.0   -1.0    1     2.0    -1.0   1.0

      2        2     2.0   0.0     2     2.0    0.0    0.0

      3        3     2.0   1.0     3     2.0    1.0    1.0

Sum           6.00                6.00                 2.0

Mean          2.00                2.00

SD            1.00                1.00

COV           2.00

r             1.00
                                                             10
3. Correlational statistics represented in
   matrices address different questions.
       Spearman’s rho                        Pearson r
1. Addresses the question,        1. Addresses the same
   “How well do the two              question      AND
   variables order the cases in   2. Addresses the question,
   exactly the same (or the          “To what extent do the two
   opposite) order?”                 variables have the same
   (Thompson, 2004, p. 130)          shape?” (Thompson, 2006,
                                     p. 130)




                                                             11
2. Different factors may be extracted based
   on the matrix of associations selected.
I. Pearson r Correlation Matrix
II. Spearman’s rho Correlation Matrix
III. Covariance Matrix




   Data from Thompson, 2004, Appendix A,
           ID 001-007 & PER1-PER6

                                           12
Pearson’s r Matrix
       PER1    PER2    PER3    PER4    PER5


PER1   1.000   0.716   0.654   0.418   0.205


PER2   0.716   1.000   0.720   0.345   0.226


PER3   0.654   0.720   1.000   0.764   0.812


PER4   0.418   0.345   0.764   1.000   0.858


PER5   0.205   0.226   0.812   0.858   1.000

                                               13
Syntax with Factor Analysis with
          Pearson’s r Matrix
FACTOR
   /VARIABLES PER1 PER2 PER3 PER4 PER5
   /MISSING LISTWISE
   /ANALYSIS PER1 PER2 PER3 PER4 PER5
   /PRINT INITIAL EXTRACTION ROTATION
   /CRITERIA MINEIGEN(1) ITERATE(25)
   /EXTRACTION pc
   /CRITERIA ITERATE(25)
   /ROTATION varimax
   /METHOD=CORRELATION.
                                         14
Output of Factor Analysis with
                   Pearson’s r Matrix
           Factor 1                    Factor 2                          h²

            0.169                        0.902                          0.841

            0.161                        0.920                          0.872

            0.749                        0.627                          0.955

            0.911                        0.242                          0.888

            0.985                        0.064                          0.974
Notes. Principal components extraction, varimax-rotated factor matrix

                                                                                15
Spearman’s rho Matrix
        PER1    PER2    PER3    PER4    PER5


PER1    1.000   0.687   0.647   0.392   0.210


PER2    0.687   1.000   0.732   0.283   0.216


PER3    0.647   0.732   1.000   0.574   0.761


PER4    0.392   0.283   0.574   1.000   0.781


PER5    0.210   0.216   0.761   0.781   1.000

                                                16
Syntax with Factor Analysis
             Spearman’s rho Matrix
NONPAR CORR
    /VARIABLES=PER1 PER2 PER3 PER4 PER5
    /PRINT=SPEARMAN
    /MATRIX=OUT(*)
    /MISSING=LISTWISE .
RECODE rowtype_ ('RHO'='CORR') .
   EXECUTE .
FACTOR
   /MATRIX=IN(cor=*)
   /ANALYSIS PER1 PER2 PER3 PER4 PER5
    /PRINT INITAL EXTRACTION ROTATION
    /CRITERIA MINEIGEN(1) ITERATE(25)
    /EXTRACTION pc
    /CRITERIA ITERATE(25)
    /ROTATION varimax
    /METHOD=CORRELATION .

                                          17
Output of Factor Analysis with
                 Spearman’s rho Matrix
          Factor 1                      Factor 2                         h²

            0.882                        0.159                          0.804

            0.924                        0.117                          0.868

            0.697                        0.644                          0.900

            0.199                        0.881                          0.815

            0.107                        0.969                          0.951
Notes. Principal components extraction, varimax-rotated factor matrix

                                                                                18
2. Different factors may be extracted based
     on the matrix of associations selected.
                Pearson’s r                             Spearman’s rho
                  Table 1                                      Table 2

       Factor 1 Factor 2       h²                   Factor 1    Factor 2    h²

        0.169      0.902     0.841                   0.882        0.159    0.804

        0.161      0.920     0.872                   0.924        0.117    0.868

        0.749      0.627     0.955                   0.697        0.644    0.900

        0.911      0.242     0.888                   0.199        0.881    0.815

        0.985      0.064     0.974                   0.107        0.969    0.951

Notes. Principal components extraction, varimax-rotated factor matrix

                                                                                   19
1.Extracted factors from a covariance matrix are a
 function of correlations and standard deviations.

• Matrix most commonly used in CFA
• Covariance is Pearson r with standard deviations
  removed
               rXY = COVXY / (SDX * SDY)
               COVXY = rXY * SDX * SDY
• Jointly influenced by:
   1. Correlation between the two variables
   2. Variability of the first variable
   3. Variability of the second variable
                                              Thompson (2004)
                                                                20
Syntax with Factor Analysis
          Covariance Matrix
FACTOR
   /VARIABLES PER1 PER2 PER3 PER4 PER5
   /MISSING LISTWISE
   /ANALYSIS PER1 PER2 PER3 PER4 PER5
   /PRINT INITIAL EXTRACTION ROTATION
   /CRITERIA MINEIGEN(1) ITERATE(25)
   /EXTRACTION pc
   /CRITERIA ITERATE(25)
   /ROTATION varimax
   /METHOD=cov.
                                         21
Covariance Matrix
       PER1    PER2    PER3    PER4    PER5

PER1   1.905   1.238   1.024   0.667   0.381

PER2   1.238   1.571   1.024   0.500   0.381

PER3   1.024   1.024   1.286   1.000   1.238

PER4   0.667   0.500   1.000   1.333   1.330

PER5   0.381   0.381   1.238   1.333   1.810


                                               22
Output of Factor Analysis with
                   Covariance Matrix

                    Factor 1              Factor 2                  h²

                      0.163                 0.923                 0.878

                      0.174                 0.898                 0.836

                      0.760                 0.615                 0.955

                      0.900                 0.250                 0.873

                      0.990                 0.055                 0.982
Notes. Principal components extraction, varimax-rotated factor matrix

                                                                          23
Matrices Sensitivity to Different
             Aspects of the Data
FA with Pearson r    FA with Spearman    FA with Covariance
Matrix               rho Matrix          Matrix
Factor Factor        Factor Factor       Factor Factor
   1      2     h²      1      2    h²      1      2     h²

0.169 0.902 0.841    0.882 0.159 0.804   0.163 0.923 0.878

0.161 0.920 0.872    0.924 0.117 0.868   0.174 0.898 0.836

0.749 0.627 0.955    0.697 0.644 0.900   0.760 0.615 0.955

0.911 0.242 0.888    0.199 0.881 0.815   0.900 0.250 0.873

0.985 0.064 0.974    0.107 0.969 0.951   0.990 0.055 0.982



                                                         24
Top 5 Take Away Points
1. Extracted factors from a covariance matrix are a
   function of correlations and standard deviations.
2. Different factors may be extracted based on the
   matrix of associations selected.
3. Correlational statistics represented in matrices
   address different questions.
4. Factors are sensitive to the information available
   in a given correlation statistic.
5. Factors are extracted from a matrix of
   associations.

                                                    25
References
Gorsuch, R.L. (1983). Factor analysis (2nd ed.).
  Hillsdale, NJ: Erlbaum.
Thompson, B. (2004). Exploratory and
  confirmatory factor analysis: Understanding
  concepts and applications. Washington, DC:
  American Psychological Association.
Thompson, B. (2006). Foundations of behavioral
  statistics: An insight-based approach. New
  York, NY: Guilford.

                                               26

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Distribution Free Vs. Nondistribution Free Methods

  • 1. Distribution Free vs. Non-distribution Free Methods in Factor Analysis Nicola Ritter, M.Ed. EPSY 643: Multivariate Methods 1 This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License.
  • 2. Top 5 Take Away Points 1. Extracted factors from a covariance matrix are a function of correlations and standard deviations. 2. Different factors may be extracted based on the matrix of associations selected. 3. Correlational statistics represented in matrices address different questions. 4. Factors are sensitive to the information available in a given correlation statistic. 5. Factors are extracted from a matrix of associations. 2
  • 3. 5. Factors are extracted from a matrix of associations. • Scores on measured variables are used to compute matrices of bivariate associations. • i.e. Covariance matrix or correlation matrix Even given only a matrix of associations, all steps in factor analysis can be completed (except for calculating the factor scores). VAR1 VAR2 VAR3 VAR4 VAR5 VAR6 VAR1 1 VAR2 1 VAR3 1 VAR4 1 VAR5 1 VAR6 1 3
  • 4. What are the different types of correlation statistics? 4
  • 5. 4. Factors are sensitive to the information available in a given correlation statistic. Bivariate Correlation Coefficients continuous rpb r rank ρ categorical Ф rpb nominal ordinal interval 5
  • 6. Pearson r Correlation Matrix • Most commonly used in EFA • Default in most statistical packages 6
  • 7. Pearson’s r vs. Spearman’s rho Pearson’s r Spearman’s ρ • Variables are intervally • Variables are at least scaled ordinally scaled. If the data are intervally scaled, either correlation coefficient could be used. 7
  • 9. Pearson r Assumption Participant X x̄ x Y Ybar y xy 1 3 4.0 -1.0 3 33.0 -30.0 30.0 2 4 4.0 0.0 4 33.0 -29.0 0.0 3 5 4.0 1.0 92 33.0 59.0 59.0 Sum 12.00 99.00 89.0 Mean 4.00 33.00 SD 1.00 51.10 COV 44.50 r 0.87 9
  • 10. Spearman rho Assumption Participant X x̄ x Y Ybar y xy 1 1 2.0 -1.0 1 2.0 -1.0 1.0 2 2 2.0 0.0 2 2.0 0.0 0.0 3 3 2.0 1.0 3 2.0 1.0 1.0 Sum 6.00 6.00 2.0 Mean 2.00 2.00 SD 1.00 1.00 COV 2.00 r 1.00 10
  • 11. 3. Correlational statistics represented in matrices address different questions. Spearman’s rho Pearson r 1. Addresses the question, 1. Addresses the same “How well do the two question AND variables order the cases in 2. Addresses the question, exactly the same (or the “To what extent do the two opposite) order?” variables have the same (Thompson, 2004, p. 130) shape?” (Thompson, 2006, p. 130) 11
  • 12. 2. Different factors may be extracted based on the matrix of associations selected. I. Pearson r Correlation Matrix II. Spearman’s rho Correlation Matrix III. Covariance Matrix Data from Thompson, 2004, Appendix A, ID 001-007 & PER1-PER6 12
  • 13. Pearson’s r Matrix PER1 PER2 PER3 PER4 PER5 PER1 1.000 0.716 0.654 0.418 0.205 PER2 0.716 1.000 0.720 0.345 0.226 PER3 0.654 0.720 1.000 0.764 0.812 PER4 0.418 0.345 0.764 1.000 0.858 PER5 0.205 0.226 0.812 0.858 1.000 13
  • 14. Syntax with Factor Analysis with Pearson’s r Matrix FACTOR /VARIABLES PER1 PER2 PER3 PER4 PER5 /MISSING LISTWISE /ANALYSIS PER1 PER2 PER3 PER4 PER5 /PRINT INITIAL EXTRACTION ROTATION /CRITERIA MINEIGEN(1) ITERATE(25) /EXTRACTION pc /CRITERIA ITERATE(25) /ROTATION varimax /METHOD=CORRELATION. 14
  • 15. Output of Factor Analysis with Pearson’s r Matrix Factor 1 Factor 2 h² 0.169 0.902 0.841 0.161 0.920 0.872 0.749 0.627 0.955 0.911 0.242 0.888 0.985 0.064 0.974 Notes. Principal components extraction, varimax-rotated factor matrix 15
  • 16. Spearman’s rho Matrix PER1 PER2 PER3 PER4 PER5 PER1 1.000 0.687 0.647 0.392 0.210 PER2 0.687 1.000 0.732 0.283 0.216 PER3 0.647 0.732 1.000 0.574 0.761 PER4 0.392 0.283 0.574 1.000 0.781 PER5 0.210 0.216 0.761 0.781 1.000 16
  • 17. Syntax with Factor Analysis Spearman’s rho Matrix NONPAR CORR /VARIABLES=PER1 PER2 PER3 PER4 PER5 /PRINT=SPEARMAN /MATRIX=OUT(*) /MISSING=LISTWISE . RECODE rowtype_ ('RHO'='CORR') . EXECUTE . FACTOR /MATRIX=IN(cor=*) /ANALYSIS PER1 PER2 PER3 PER4 PER5 /PRINT INITAL EXTRACTION ROTATION /CRITERIA MINEIGEN(1) ITERATE(25) /EXTRACTION pc /CRITERIA ITERATE(25) /ROTATION varimax /METHOD=CORRELATION . 17
  • 18. Output of Factor Analysis with Spearman’s rho Matrix Factor 1 Factor 2 h² 0.882 0.159 0.804 0.924 0.117 0.868 0.697 0.644 0.900 0.199 0.881 0.815 0.107 0.969 0.951 Notes. Principal components extraction, varimax-rotated factor matrix 18
  • 19. 2. Different factors may be extracted based on the matrix of associations selected. Pearson’s r Spearman’s rho Table 1 Table 2 Factor 1 Factor 2 h² Factor 1 Factor 2 h² 0.169 0.902 0.841 0.882 0.159 0.804 0.161 0.920 0.872 0.924 0.117 0.868 0.749 0.627 0.955 0.697 0.644 0.900 0.911 0.242 0.888 0.199 0.881 0.815 0.985 0.064 0.974 0.107 0.969 0.951 Notes. Principal components extraction, varimax-rotated factor matrix 19
  • 20. 1.Extracted factors from a covariance matrix are a function of correlations and standard deviations. • Matrix most commonly used in CFA • Covariance is Pearson r with standard deviations removed rXY = COVXY / (SDX * SDY) COVXY = rXY * SDX * SDY • Jointly influenced by: 1. Correlation between the two variables 2. Variability of the first variable 3. Variability of the second variable Thompson (2004) 20
  • 21. Syntax with Factor Analysis Covariance Matrix FACTOR /VARIABLES PER1 PER2 PER3 PER4 PER5 /MISSING LISTWISE /ANALYSIS PER1 PER2 PER3 PER4 PER5 /PRINT INITIAL EXTRACTION ROTATION /CRITERIA MINEIGEN(1) ITERATE(25) /EXTRACTION pc /CRITERIA ITERATE(25) /ROTATION varimax /METHOD=cov. 21
  • 22. Covariance Matrix PER1 PER2 PER3 PER4 PER5 PER1 1.905 1.238 1.024 0.667 0.381 PER2 1.238 1.571 1.024 0.500 0.381 PER3 1.024 1.024 1.286 1.000 1.238 PER4 0.667 0.500 1.000 1.333 1.330 PER5 0.381 0.381 1.238 1.333 1.810 22
  • 23. Output of Factor Analysis with Covariance Matrix Factor 1 Factor 2 h² 0.163 0.923 0.878 0.174 0.898 0.836 0.760 0.615 0.955 0.900 0.250 0.873 0.990 0.055 0.982 Notes. Principal components extraction, varimax-rotated factor matrix 23
  • 24. Matrices Sensitivity to Different Aspects of the Data FA with Pearson r FA with Spearman FA with Covariance Matrix rho Matrix Matrix Factor Factor Factor Factor Factor Factor 1 2 h² 1 2 h² 1 2 h² 0.169 0.902 0.841 0.882 0.159 0.804 0.163 0.923 0.878 0.161 0.920 0.872 0.924 0.117 0.868 0.174 0.898 0.836 0.749 0.627 0.955 0.697 0.644 0.900 0.760 0.615 0.955 0.911 0.242 0.888 0.199 0.881 0.815 0.900 0.250 0.873 0.985 0.064 0.974 0.107 0.969 0.951 0.990 0.055 0.982 24
  • 25. Top 5 Take Away Points 1. Extracted factors from a covariance matrix are a function of correlations and standard deviations. 2. Different factors may be extracted based on the matrix of associations selected. 3. Correlational statistics represented in matrices address different questions. 4. Factors are sensitive to the information available in a given correlation statistic. 5. Factors are extracted from a matrix of associations. 25
  • 26. References Gorsuch, R.L. (1983). Factor analysis (2nd ed.). Hillsdale, NJ: Erlbaum. Thompson, B. (2004). Exploratory and confirmatory factor analysis: Understanding concepts and applications. Washington, DC: American Psychological Association. Thompson, B. (2006). Foundations of behavioral statistics: An insight-based approach. New York, NY: Guilford. 26

Editor's Notes

  1. Thinking back to 640, what were some of the different types of bivariate relationships? Pearson r, covariance, etc.
  2. Because the factors are extracted from a matrix of associations, the factors are sensitive to the information available in the given statistic measuring the bivariate relationship. For example, if a statistic only considers the rank of the measured variables, such as Spearman’s rho, then the factors will also be based on rank. On the other hand if a statistic considers both order and distance, such as the Pearson r, then the factors will also be based on order and distance.
  3. If the data is intervally scaled, we could use either the Pearson r or the Spearman rho coefficients.
  4. Principle Components extraction and varimax rotation (factors are orthogonal or factors are ‘uncorrelated’)
  5. Now that the factors have been extracted using all three matrices, compare the three outputs. When we use the Spearman’s rho matrix, in general the values of the variables that do not contribute to the factors tend to attenuate. Difference between the two is due to the Pearson r matrix accounting for distance and order, while the Spearman rho matrix only accounts for order.