2. Krebs Cycle
It was named after the Hans Adolf Krebs
who discovered it in 1937.
It is also known by several other names:
• Citric Acid Cycle
• Tricarboxylic Acid Cycle (TCA)
3. Krebs Cycle
This cycle occurs in the mitochondrial matrix
It is the series of biochemical reactions in which the acetyl portion of
acetyl CoA is oxidized to carbon dioxide and the reduced coenzymes
FADH2 and NADH are produced.
The Krebs cycle is what is known as Amphibolic, in that it is both
catabolic (breaks down molecules) and anabolic (builds molecules).
It is a series of chemical reactions used by all aerobic organisms to
generate energy through the oxidization of acetate derived from
carbohydrates, fats, and proteins into carbon dioxide
4. Krebs Cycle
•Each stage in the cycle (and in the link reaction—pyruvate conversion into
acetyl CoA) occurs twice for every glucose molecule that enters glycolysis,
because 2 pyruvate molecules are produced for each glucose.
•The eight steps of the citric acid cycle are a series of redox, dehydration,
hydration, and decarboxylation reactions.
•Each turn of the cycle forms one GTP or ATP as well as three NADH
molecules and one FADH2 molecule, which will be used in further steps of
cellular respiration to produce ATP for the cell.
5. Description of terms
•Oxidation – removal of electrons from a molecule. This subsequently
lowers the energy content of a molecule.
Most biological oxidations involve the loss of hydrogen atoms. This
type of oxidation is referred to as a dehydrogenation. The enzymes
that catalyzes these reactions are called dehydrogenases.
Gain of oxygen atoms
6. Description of terms
•Reduction – opposite of oxidation. It is the addition of electrons to a
molecule.
When a molecule is oxidized, the liberated hyrdride ions (H-) do not
remain free in the cell. In order to harness the energy of these
electrons, they are immediately transferred to another compound by
coenzymes.
Loss of oxygen atoms
7. Description of terms
•Phosphorylation - accomplished by transferring a phosphate group to
ADP
•Decarboxylation – carbon chain is shortened by the removal of a
carbon atom (COO-) as CO2
• Isomerization - is the process by which one molecule is transformed
into another molecule which has exactly the same atoms
•Dehydration – removing of water molecules
•Hydration – addition of water molecules
8. Link reaction between glycolysis and krebs
cycle -pyruvate conversion to acetyl coa
Pyruvate is transported across the
mitochondrion’s inner membrane
and into the inner compartment,
called the matrix.
An enzyme pyruvate dehydrogenase
complex splits each molecule of
pyruvate into a molecule of CO2 and
a two-carbon acetyl group.
9. pyruvate conversion to acetyl coa
The CO2 diffuses out of the cell, and the acetyl group combines with a
molecule called coenzyme A (abbreviated as CoA). The product of this
reaction is acetyl-CoA.
NAD+ is changed to its reduced form, NADH that will enter the Electron
Transport Chain.
11. Step 1: Formation Of Citrate
Acetyl CoA, which carries the two-carbon degradation product of glycolysis
enters the cycle by combining with the oxaloacetate to give (S)-citryl CoA.
The addition is catalyzed by the citrate synthase.
(S)-citryl CoA is hydrolyzed to citrate catalyzed by the same citrate synthase
to produce CoA-SH and citrate.
13. Step 2. Formation of isocitrate
Citrate, a tertiary alcohol, is converted into its isomer, isocitrate, a secondary
alcohol, in an isomerization process that involves dehydration followed by
hydration that are both catalysed by the enzyme aconitase.
–OH group from citrate is moved to a different carbon atom.
15. Step 3. Oxidation of isocitrate and
formation of CO2
•This step involves oxidation-reduction (the first of four redox reactions in the
Krebs Cycle) and decarboxylation.
•The reaction catalyzed by isocitrate dehydrogenase is complex: (1) Isocitrate
is oxidized to oxalosuccinate by NAD+, releasing 2 hydrogen atoms. (2) One
hydrogen and two electrons are transferred to NAD+ to form NADH; the
remaining hydrogen ion is released. (3) the oxalosuccinate remains bound to
the enzyme and undergoes decarboxylation, which produces the 5-carbon
species α-ketoglutarate.
•This step yields the first molecules of CO2 and NADH in the cycle.
17. Step 4: oxidation of α-ketoglutarate and
formation of CO2
•This second redox reaction of the cycle involves one molecule each of NAD+,
CoA-SH, and α-ketoglurate.
•The catalyst is an aggregate of three enzymes called the α-ketoglutarate
dehydrogenase complex.
•Both redox reaction and decarboxylation occur.
•Three products: CO2, NADH, and the 4-carbon species succinyl CoA.
•This step yields the second molecule of CO2 and NADH in the cycle.
19. Step 5: thioester bond cleavage in succinyl
coa and phosphorylation of GDP
•Two molecules react with succinyl CoA—a molecule of GDP (similar to
ADP) and a free phosphate group (Pi).
•The enzyme succinyl CoA synthetase removes coenzyme A by thioester bond
cleavage.
•The energy released is used to combine GDP and Pi to give GTP.
•Succinyl CoA has been converted to succinate.
20. Step 5: thioester bond cleavage in succinyl
coa and phosphorylation of GDP
21. Step 6: oxidation of succinate
This is the third redox reaction of the cycle.
Succinate is dehydrogenated by FAD catalyzed by succinate dehydrogenase
to produce fumarate, a 4-carbon species with trans double bond.
FAD is reduced to FADH2.
23. Step 7: hydration of fumarate
•The enzyme fumarase catalyzes the addition of water (nucleophilic addition)
to the double bond of fumarate.
•The enzyme is stereospecific, so only the L-isomer of the product malate is
produced.
25. Step 8: oxidation of l-malate to regenerate
oxaloacetate
•This is the fourth redox reaction of the cycle.
•A molecule of NAD+ reacts with malate, picking up two hydrogen
atoms (oxidation) with the associated energy to form NADH + H+.
•This reaction is catalyzed by malate dehydrogenase.
•The product of this reaction, is oxaloacetate that can combine with
another molecule of Acetyl CoA, and the cycle can begin again.
28. Learning check
A term that is used to describe the process that is both catabolic and anabolic.
Amphibolic
Amphoteric
Metameric
29. In what part of the eukaryotic cell does the Krebs Cycle occurs?
Cytoplasm
Lysosome
Mitochondrial Matrix
The compound that links the process of Glycolysis and Citric Acid
Cycle.
Oxaloacetate
Pyruvate
Acetyl CoA
30. It is the compound which reacts with the Acetyl CoA that enters the Krebs
Cycle in step 1, and it is also the product when L-Malate is oxidized in step
8.
α-ketoglutarate
Succinyl CoA
Oxaloacetate
Which of the following alcohols is not readily oxidized?
Primary alcohol
Secondary alcohol
Tertiary alcohol
31. Which of the following alcohols is not readily oxidized?
Primary alcohol
Secondary alcohol
Tertiary alcohol