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Factors associated with the clinical characteristic “Dominance” published in “Psychosocial Treatments for Cocaine Dependence”   [Arch Gen Psychiatry 56: June 1999] Tim Hare STA531 Fall 2009
Cross-sectional (Month = 6) modeling of DOMI (Dominance) as a  primary outcome ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Correlation data for  raw  score VIND vs. DOMI Binned by score trend of the 95% CI’s suggests possible significance of categorical based on binning 1.00000 0.80637 <.0001 VIND 0.80637 <.0001 1.00000 DOMI VIND DOMI Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
Correlation data for  raw  score INTR vs DOMI Again, trend in the 95% CI’s 1.00000 0.79210 <.0001 INTR 0.79210 <.0001 1.00000 DOMI INTR DOMI Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
Correlation data for  raw  score COLD vs DOMI Again, trend in the 95% CI’s 1.00000 457 0.73152 <.0001 456 COLD 0.73152 <.0001 456 1.00000 456 DOMI COLD DOMI Pearson Correlation Coefficients Prob > |r| under H0: Rho=0 Number of Observations
Cross-sectional (Month = 6) modeling of DOMI (Dominance) as a  primary outcome ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
OUTCOME MEASURE = DOMI  Raw score NORMAL PROBABILITY PLOT 1.00000 0.94328 <.0001 zdomi Rank for Variable DOMI 0.94328 <.0001 1.00000 DOMI zdomi DOMI Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
Potential 2-way & 3-way CROSS FACTOR GROUP VIEWS VINDGROUP-INTRGROUP VINDGROUP-ALC_SUBGROUP VINDGROUP-ALC_SUBGROUP-INTRGROUP 1) Evidence for non-homogeneous variance.  2) As well, groups are unbalanced (dissimilar counts)   USE  PROC MIXED
Any hypothesis suggest itself? ,[object Object],[object Object],[object Object],[object Object]
NEW CATEGORICAL VARIABLES (NOT RAW DATA) MEAN DOMI SCORE by LEVEL ALC_SUBGROUP INTRGROUP VINDGROUP Some good evidence that our 2-LEVEL categorization correlates with our OUTCOME measure. What about combinations of the above CATEGORIES by LEVEL?
2-way- & 3-way CROSS FACTOR GROUPS  MEAN DOMI SCORES (VIND*INTR) (VIND*ALC_SUB) VIND*ALC_SUB*INTR Good story to explore… What about “interaction”???
Possible interaction between  VINDGROUP and ALC_SUBGROUP
Possible interaction between  INTRGROUP and ALC_SUBGROUP
Possible interaction between  INTRGROUP and VINDGROUP
Graphical analysis to examine potential  3-WAY  interaction VINDGROUP*INTRGROUP*ALC_SUBGROUP( LOW/HIGH )  ALC_SUBGROUP =  LOW ALC_SUBGROUP =  HIGH
PREVIEW for longitudinal modeling:  Correlation noted in CROSS SECTIONAL (Month=6)  data seems to  persist across time … Therefore suspect “repeated measures” (longitudinal modeling) may model  well from the same variables
Exploration leads to Hypothesis ,[object Object],[object Object],[object Object]
Cross sectional (Month=6) modeling results confirm our suspicions   PROC MIXED ( α =0.05) 2X/3X 0.0044 5.50 447 2 VINDGROUP*ALC_SUBGROUP*INTRGROUP 0.0027 9.11 447 1 VINDGROUP*ALC_SUBGROUP <.0001 33.72 447 1 VINDGROUP*INTRGROUP <.0001 163.16 447 1 INTRGROUP 0.0136 6.13 447 1 ALC_SUBGROUP <.0001 136.66 447 1 VINDGROUP 0.0002 13.79 447 1 COLDGROUP Pr > F F Value Den DF Num DF Effect Type 3 Tests of Fixed Effects
CROSS SECTIONAL (Month=6) DOMI SCORE LSMEANS for 3-way crossed observational groups ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
If you’re Vindictive=Low, Intrusive=Low… you probably don’t have to worry about being overly Dominant after drinking … At 95% conf. Level: not significant <.0001 5.55 447 0.3445 1.9119 LHL <.0001 4.53 447 0.2747 1.2440 LLL Pr > |t| t Value DF Standard Error Estimate Label Estimates 0.0938 2.82 447 1 LHL-LLL Pr > F F Value Den DF Num DF Label Contrasts
Does  intrusiveness trump alcohol  in low vindictives? VL AL/H IL VL AL/H IH <.0001 9.04 447 0.45 4.08 AVG(LHH,LLH) <.0001 6.58 447 0.24 1.58 AVG(LLL,LHL) 0.0001 3.92 447 0.66 2.57 LLH <.0001 9.00 447 0.62 5.59 LHH <.0001 5.55 447 0.34 1.91 LHL <.0001 4.53 447 0.27 1.24 LLL Pr > |t| t Value DF Standard Error Estimate Label Estimates <.0001 24.87 447 1 AVG(LHH,LLH)-AVG(LLL,LHL) 0.0009 11.21 447 1 LHH-LLH 0.093 2.82 447 1 LHL-LLL Pr > F F Value Den DF Num DF Label Contrasts
CROSS SECTIONAL MODEL: (Month=6)  Good fit?  Residuals plots… 1.00000 0.97126 <.0001 zresid Rank for Variable Resid 0.97126 <.0001 1.00000 Resid Residual zresid Resid Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
Repeated Measures Analysis of the entire Month1-Month6 data set  ,[object Object],[object Object],[object Object],ALC_SUBGROUP was retained due to participation in  higher order terms of significance. 0.0012 7.16 102 2 VINDGR*ALC_SU*INTRGR 0.0098 6.93 102 1 VINDGROUP*ALC_SUBGRO <.0001 39.29 102 1 VINDGROUP*INTRGROUP <.0001 125.09 102 1 INTRGROUP 0.8081 0.06 102 1 ALC_SUBGROUP <.0001 132.23 102 1 VINDGROUP <.0001 22.20 102 1 COLDGROUP Pr > F F Value Den DF Num DF Effect Type 3 Tests of Fixed Effects
LONGITUDINAL MODEL:  Good fit?  Residuals plots… 1.00000 0.95069 <.0001 zresid Rank for Variable Resid 0.95069 <.0001 1.00000 Resid Residual zresid Resid Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
Repeated Measures  (COV=UN,  no terms removed) ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],At 95% conf. Level: not significant <.0001 6.04 102 0.3452 2.0854 LHL <.0001 5.59 102 0.2996 1.6757 LLL Pr > |t| t Value DF Standard Error Estimate Label Estimates 0.2124 1.57 102 1 LHL-LLL Pr > F F Value Den DF Num DF Label Contrasts
What about our cross sectional contrast of  alcohol being trumped by intrusiveness  in low vindictives?  Does it still hold in the longitudinal analysis? Still significant At 95% CI <.0001 8.44 102 0.4247 3.5832 AVG(LHH,LLH) <.0001 6.74 102 0.2790 1.8806 AVG(LLL,LHL) <.0001 5.34 102 0.5583 2.9805 LLH <.0001 7.36 102 0.5689 4.1859 LHH <.0001 6.04 102 0.3452 2.0854 LHL <.0001 5.59 102 0.2996 1.6757 LLL Pr > |t| t Value DF Standard Error Estimate Label Estimates 0.0002 15.41 102 1 AVG(LHH,LLH)-AVG(LLL,LHL) 0.1069 2.65 102 1 LHH-LLH 0.2124 1.57 102 1 LHL-LLL Pr > F F Value Den DF Num DF Label Contrasts
Conclusions ,[object Object],[object Object],[object Object]
Q&A

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Data Mining through Linear Modeling

  • 1. Factors associated with the clinical characteristic “Dominance” published in “Psychosocial Treatments for Cocaine Dependence” [Arch Gen Psychiatry 56: June 1999] Tim Hare STA531 Fall 2009
  • 2.
  • 3. Correlation data for raw score VIND vs. DOMI Binned by score trend of the 95% CI’s suggests possible significance of categorical based on binning 1.00000 0.80637 <.0001 VIND 0.80637 <.0001 1.00000 DOMI VIND DOMI Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
  • 4. Correlation data for raw score INTR vs DOMI Again, trend in the 95% CI’s 1.00000 0.79210 <.0001 INTR 0.79210 <.0001 1.00000 DOMI INTR DOMI Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
  • 5. Correlation data for raw score COLD vs DOMI Again, trend in the 95% CI’s 1.00000 457 0.73152 <.0001 456 COLD 0.73152 <.0001 456 1.00000 456 DOMI COLD DOMI Pearson Correlation Coefficients Prob > |r| under H0: Rho=0 Number of Observations
  • 6.
  • 7. OUTCOME MEASURE = DOMI Raw score NORMAL PROBABILITY PLOT 1.00000 0.94328 <.0001 zdomi Rank for Variable DOMI 0.94328 <.0001 1.00000 DOMI zdomi DOMI Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
  • 8. Potential 2-way & 3-way CROSS FACTOR GROUP VIEWS VINDGROUP-INTRGROUP VINDGROUP-ALC_SUBGROUP VINDGROUP-ALC_SUBGROUP-INTRGROUP 1) Evidence for non-homogeneous variance. 2) As well, groups are unbalanced (dissimilar counts)  USE PROC MIXED
  • 9.
  • 10. NEW CATEGORICAL VARIABLES (NOT RAW DATA) MEAN DOMI SCORE by LEVEL ALC_SUBGROUP INTRGROUP VINDGROUP Some good evidence that our 2-LEVEL categorization correlates with our OUTCOME measure. What about combinations of the above CATEGORIES by LEVEL?
  • 11. 2-way- & 3-way CROSS FACTOR GROUPS MEAN DOMI SCORES (VIND*INTR) (VIND*ALC_SUB) VIND*ALC_SUB*INTR Good story to explore… What about “interaction”???
  • 12. Possible interaction between VINDGROUP and ALC_SUBGROUP
  • 13. Possible interaction between INTRGROUP and ALC_SUBGROUP
  • 14. Possible interaction between INTRGROUP and VINDGROUP
  • 15. Graphical analysis to examine potential 3-WAY interaction VINDGROUP*INTRGROUP*ALC_SUBGROUP( LOW/HIGH ) ALC_SUBGROUP = LOW ALC_SUBGROUP = HIGH
  • 16. PREVIEW for longitudinal modeling: Correlation noted in CROSS SECTIONAL (Month=6) data seems to persist across time … Therefore suspect “repeated measures” (longitudinal modeling) may model well from the same variables
  • 17.
  • 18. Cross sectional (Month=6) modeling results confirm our suspicions PROC MIXED ( α =0.05) 2X/3X 0.0044 5.50 447 2 VINDGROUP*ALC_SUBGROUP*INTRGROUP 0.0027 9.11 447 1 VINDGROUP*ALC_SUBGROUP <.0001 33.72 447 1 VINDGROUP*INTRGROUP <.0001 163.16 447 1 INTRGROUP 0.0136 6.13 447 1 ALC_SUBGROUP <.0001 136.66 447 1 VINDGROUP 0.0002 13.79 447 1 COLDGROUP Pr > F F Value Den DF Num DF Effect Type 3 Tests of Fixed Effects
  • 19.
  • 20. If you’re Vindictive=Low, Intrusive=Low… you probably don’t have to worry about being overly Dominant after drinking … At 95% conf. Level: not significant <.0001 5.55 447 0.3445 1.9119 LHL <.0001 4.53 447 0.2747 1.2440 LLL Pr > |t| t Value DF Standard Error Estimate Label Estimates 0.0938 2.82 447 1 LHL-LLL Pr > F F Value Den DF Num DF Label Contrasts
  • 21. Does intrusiveness trump alcohol in low vindictives? VL AL/H IL VL AL/H IH <.0001 9.04 447 0.45 4.08 AVG(LHH,LLH) <.0001 6.58 447 0.24 1.58 AVG(LLL,LHL) 0.0001 3.92 447 0.66 2.57 LLH <.0001 9.00 447 0.62 5.59 LHH <.0001 5.55 447 0.34 1.91 LHL <.0001 4.53 447 0.27 1.24 LLL Pr > |t| t Value DF Standard Error Estimate Label Estimates <.0001 24.87 447 1 AVG(LHH,LLH)-AVG(LLL,LHL) 0.0009 11.21 447 1 LHH-LLH 0.093 2.82 447 1 LHL-LLL Pr > F F Value Den DF Num DF Label Contrasts
  • 22. CROSS SECTIONAL MODEL: (Month=6) Good fit? Residuals plots… 1.00000 0.97126 <.0001 zresid Rank for Variable Resid 0.97126 <.0001 1.00000 Resid Residual zresid Resid Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
  • 23.
  • 24. LONGITUDINAL MODEL: Good fit? Residuals plots… 1.00000 0.95069 <.0001 zresid Rank for Variable Resid 0.95069 <.0001 1.00000 Resid Residual zresid Resid Pearson Correlation Coefficients, N = 456 Prob > |r| under H0: Rho=0
  • 25.
  • 26. What about our cross sectional contrast of alcohol being trumped by intrusiveness in low vindictives? Does it still hold in the longitudinal analysis? Still significant At 95% CI <.0001 8.44 102 0.4247 3.5832 AVG(LHH,LLH) <.0001 6.74 102 0.2790 1.8806 AVG(LLL,LHL) <.0001 5.34 102 0.5583 2.9805 LLH <.0001 7.36 102 0.5689 4.1859 LHH <.0001 6.04 102 0.3452 2.0854 LHL <.0001 5.59 102 0.2996 1.6757 LLL Pr > |t| t Value DF Standard Error Estimate Label Estimates 0.0002 15.41 102 1 AVG(LHH,LLH)-AVG(LLL,LHL) 0.1069 2.65 102 1 LHH-LLH 0.2124 1.57 102 1 LHL-LLL Pr > F F Value Den DF Num DF Label Contrasts
  • 27.
  • 28. Q&A