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----- Identification of Potent SHP2 inhibitors Liwei Chen Ph.D. Dr. Jerry Wu Lab   Discovery of Novel SHP2 inhibitors
SHP2 Protein Tyrosine Phosphatase Cys
Germline mutations: Noonan Syndrome, leukemias Somatic mutations: Myeloid malignancies, solid tumors   Known SHP2 mutations in human cancer Cancer Res. (2004) 64: 8816-8820
 
Deregulation of SHP2 by CagA
The links between activating mutations in SHP2 and cancer  suggest that SHP2 may be the product of an oncogene and leukemia-associated Shp2 mutants be attractive therapeutic targets
Aims ,[object Object],[object Object]
Methods ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Flowchart of the purification strategy GST-Shp2 expressed in  E.coli Eluate used for PTP assays GSH Sepharose Elute with gluthatione
Screening Strategy of the NCI Diversity Set NCI diversity set (1990 compounds) Screen (at 10   M) DiFMUP-based PTPase assay Confirm primary hits 33 active compounds (50% inhibition) Obtain active compounds from NCI Phosphopeptide-based PTPase assay (at 10   M) 24 active compounds (50% inhibition) Determine IC50 for SHP2 and SHP1 PTPases
Summary of IC50 of potential inhibitors >30 (~50) 5.034 87877 no inhibition 3.243 69343 13.15 3.238 117199 17.45 3.19 50352 5.506 0.332 339601 2.693 0.303 119910 0.737 0.19 119913 Rodent SHP1 Rodent SHP2 IC50 (  M) NSC ID
Molecular model of NSC-87877 binding to the SHP2 PTP domain
NSC-87877 docked to SHP2
NSC-87877 docked to SHP1
Recognition loop
[object Object],SHP2V280 SHP2RD Phosphotyrosine recognition loop (motif 1)
N, number of experiments. Each experiment was performed in triplicates. Table I. Inhibition of PTPs by NSC-87877 in vitro PTP  IC50  Selectivity (fold) SHP2  0.35  +  0.15   M  (N = 9)  1 SHP1  0.35  +  0.16   M  (N = 5)  1 PTP1B  1.69  +  0.81   M  (N = 4)  5 HePTP  7.73  +  3.12   M  (N = 4)  22 CD45  84.68  +  28.03   M (N = 3)  242 hLAR-D1 150.93 ± 18.15   M  (N = 4)  431 hDEP1   65.62 ± 7.14   M  (N = 3)  187 SHP2V280  0.99  +  0.35   M  (N = 4)  3 SHP2RD   1.01  +  0.49   M  (N = 4)  3    
Enzyme Kinetic Study Vmax = 269.97 ± 8.42 Km = 71.22 ± 6.39 Ki = 0.24 ± 0.02 ,[object Object],[object Object],[object Object],[object Object]
The question about the selectivity between SHP2 and SHP1? ,[object Object],[object Object],[object Object],[object Object]
Model outlining the role of Gab1 and SHP2 in EGF-induced Ras activation  Growth factor, cytokines RTK or JAK associated receptor Gab1/Gab2 Sos-Grb2 SHP2 Ras Ren Y,. Et al., J. Biol. Chem., Vol. 279, Issue 9, 8497-8505, February 27, 2004
NSC-87877 inhibits the SHP2 PTP activity in cells
 
 
 
 
 
Summary ,[object Object],[object Object],[object Object]
ChemDiv Library Screening ,[object Object],PTP  IC50  Selectivity (fold) HLM002903  SHP2  6.48  +  0.75   M  (N = 5)  1 SHP1  >300   M  (N = 3)  PTP1B  >300   M  (N = 3)  HePTP  >300   M  (N = 3)  HLM019544 SHP2  3.60  +  0.05   M  (N = 3)  1 SHP1  41.48  +  2.36   M  (N = 3)  12 PTP1B  43.63  +   8.88   M  (N = 3)  12 HePTP  >300   M  (N = 3)
A B SHP2E76K activates Ras-Erk pathway in TF-1 human  myeloid   leukemia cells
 
SHP2E76K activates Src family kinases (SFKs) A B
SHP2E76K sustains TF-1 cells cytokine-independent growth and hypersensitivity to GM-CSF A B C D
Methocult   Colony   Assay ,[object Object],[object Object],[object Object],[object Object],[object Object]
 
 
 
 
Acknowledgement Dr. Jerry Wu Lab Yuan Ren, Ph.D. Zhengming Chen, Ph.D. Hai Wang, Ph.D. High-through Screening Facility Core Richard Yip Shen-Shu Sung Wayne Guida Drug Discovery Program Harshani Lawrence  Nicholas J. Lawrence  Said M. Sebti

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Discovery of Novel Shp2 inhibitors

  • 1. ----- Identification of Potent SHP2 inhibitors Liwei Chen Ph.D. Dr. Jerry Wu Lab Discovery of Novel SHP2 inhibitors
  • 2. SHP2 Protein Tyrosine Phosphatase Cys
  • 3. Germline mutations: Noonan Syndrome, leukemias Somatic mutations: Myeloid malignancies, solid tumors Known SHP2 mutations in human cancer Cancer Res. (2004) 64: 8816-8820
  • 4.  
  • 6. The links between activating mutations in SHP2 and cancer suggest that SHP2 may be the product of an oncogene and leukemia-associated Shp2 mutants be attractive therapeutic targets
  • 7.
  • 8.
  • 9. Flowchart of the purification strategy GST-Shp2 expressed in E.coli Eluate used for PTP assays GSH Sepharose Elute with gluthatione
  • 10. Screening Strategy of the NCI Diversity Set NCI diversity set (1990 compounds) Screen (at 10  M) DiFMUP-based PTPase assay Confirm primary hits 33 active compounds (50% inhibition) Obtain active compounds from NCI Phosphopeptide-based PTPase assay (at 10  M) 24 active compounds (50% inhibition) Determine IC50 for SHP2 and SHP1 PTPases
  • 11. Summary of IC50 of potential inhibitors >30 (~50) 5.034 87877 no inhibition 3.243 69343 13.15 3.238 117199 17.45 3.19 50352 5.506 0.332 339601 2.693 0.303 119910 0.737 0.19 119913 Rodent SHP1 Rodent SHP2 IC50 (  M) NSC ID
  • 12. Molecular model of NSC-87877 binding to the SHP2 PTP domain
  • 16.
  • 17. N, number of experiments. Each experiment was performed in triplicates. Table I. Inhibition of PTPs by NSC-87877 in vitro PTP IC50 Selectivity (fold) SHP2 0.35 + 0.15  M (N = 9) 1 SHP1 0.35 + 0.16  M (N = 5) 1 PTP1B 1.69 + 0.81  M (N = 4) 5 HePTP 7.73 + 3.12  M (N = 4) 22 CD45 84.68 + 28.03  M (N = 3) 242 hLAR-D1 150.93 ± 18.15  M (N = 4) 431 hDEP1 65.62 ± 7.14  M (N = 3) 187 SHP2V280 0.99 + 0.35  M (N = 4) 3 SHP2RD 1.01 + 0.49  M (N = 4) 3  
  • 18.
  • 19.
  • 20. Model outlining the role of Gab1 and SHP2 in EGF-induced Ras activation Growth factor, cytokines RTK or JAK associated receptor Gab1/Gab2 Sos-Grb2 SHP2 Ras Ren Y,. Et al., J. Biol. Chem., Vol. 279, Issue 9, 8497-8505, February 27, 2004
  • 21. NSC-87877 inhibits the SHP2 PTP activity in cells
  • 22.  
  • 23.  
  • 24.  
  • 25.  
  • 26.  
  • 27.
  • 28.
  • 29. A B SHP2E76K activates Ras-Erk pathway in TF-1 human myeloid leukemia cells
  • 30.  
  • 31. SHP2E76K activates Src family kinases (SFKs) A B
  • 32. SHP2E76K sustains TF-1 cells cytokine-independent growth and hypersensitivity to GM-CSF A B C D
  • 33.
  • 34.  
  • 35.  
  • 36.  
  • 37.  
  • 38. Acknowledgement Dr. Jerry Wu Lab Yuan Ren, Ph.D. Zhengming Chen, Ph.D. Hai Wang, Ph.D. High-through Screening Facility Core Richard Yip Shen-Shu Sung Wayne Guida Drug Discovery Program Harshani Lawrence Nicholas J. Lawrence Said M. Sebti