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Early stage experimental data in structural biology is generally unmaintained
and inaccessible to the public. It is increasingly believed that this data, which
forms the basis for each macromolecular structure discovered by this field, must
be archived and, in due course, published. Furthermore, the widespread use of
shared scientific facilities such as synchrotron beamlines complicates the issue of
data storage, access and movement, as does the increase of remote users. This
work describes a prototype system that adapts existing federated cyberinfrastructure
technology and techniques to significantly improve the operational
environment for users and administrators of synchrotron data collection
facilities used in structural biology. This is achieved through software from the
Virtual Data Toolkit and Globus, bringing together federated users and facilities
from the Stanford Synchrotron Radiation Lightsource, the Advanced Photon
Source, the Open Science Grid, the SBGrid Consortium and Harvard Medical
School. The performance and experience with the prototype provide a model for
data management at shared scientific facilities.
Stokes-Rees, Ian, Ian Levesque, Frank V. Murphy, Wei Yang, Ashley Deacon, and Piotr Sliz. “Adapting Federated Cyberinfrastructure for Shared Data Collection Facilities in Structural Biology.” Journal of Synchrotron Radiation 19, no. 3 (April 6, 2012). http://scripts.iucr.org/cgi-bin/paper?S0909049512009776.Adapting federated cyberinfrastructure for shared data collection facilities ...
Adapting federated cyberinfrastructure for shared data collection facilities ...Boston Consulting Group
Recommended
Early stage experimental data in structural biology is generally unmaintained
and inaccessible to the public. It is increasingly believed that this data, which
forms the basis for each macromolecular structure discovered by this field, must
be archived and, in due course, published. Furthermore, the widespread use of
shared scientific facilities such as synchrotron beamlines complicates the issue of
data storage, access and movement, as does the increase of remote users. This
work describes a prototype system that adapts existing federated cyberinfrastructure
technology and techniques to significantly improve the operational
environment for users and administrators of synchrotron data collection
facilities used in structural biology. This is achieved through software from the
Virtual Data Toolkit and Globus, bringing together federated users and facilities
from the Stanford Synchrotron Radiation Lightsource, the Advanced Photon
Source, the Open Science Grid, the SBGrid Consortium and Harvard Medical
School. The performance and experience with the prototype provide a model for
data management at shared scientific facilities.
Stokes-Rees, Ian, Ian Levesque, Frank V. Murphy, Wei Yang, Ashley Deacon, and Piotr Sliz. “Adapting Federated Cyberinfrastructure for Shared Data Collection Facilities in Structural Biology.” Journal of Synchrotron Radiation 19, no. 3 (April 6, 2012). http://scripts.iucr.org/cgi-bin/paper?S0909049512009776.Adapting federated cyberinfrastructure for shared data collection facilities ...
Adapting federated cyberinfrastructure for shared data collection facilities ...Boston Consulting Group
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