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Introduction to
scholarly publishing
for researchers
What are editors, reviewers and
publishers looking for?
Dale Seaton
| 2
INTRODUCTIONS
Dale Seaton
▪ BSc in Zoology, and PhD and 2 post doctoral
positions in Veterinary Parasitology
▪ I have worked in scientific and medical publishing
for 25 years and for Elsevier for 20 years in various
roles.
▪ As Executive Publisher I am responsible for the
management of 16 journals in the areas of
Parasitology, Insect Science and Tropical Medicine.
▪ I also develop and organize new scientific
conferences: eg. Impact of Environmental Changes
on Infectious Diseases, Molecular Insect Science.
▪ I manage approximately 50 Editors around the world.
| 3
AGENDA
1: Brief Introduction to Thailand Research Output
2: Trends in publishing
3: Choosing a journal
4: Ready to write your paper
5: The peer review process
6: Promoting your article
7: Ethics in publishing
Introduction to Thailand
Research Output
| 6
All Thai research output (through academic communications), 2017-2022
Thailand Research Output, 2017-2022
| 7
Thailand Research Output, 2017-2022
| 8
Top Thai Institutions and Researchers.
There are
106
recognized
academic
Institutions
in Thailand.
| 9
Mahidol University output
Trends in scientific
publishing
| 11
Origins of scholarly publishing
Henry
Oldenburg
(1618- 1677)
Founding Editor
and Commercial
Publisher of the
first scientific
journal
March 6,1665
Philosophical
Transactions
of the Royal
Society, the first
true scholarly
journal
1440
The ability to
create multiple,
bulk copies of
literature
becomes
possible with
the printing
press.
12
Registration
Timestamp to officially note
who submitted scientific
results first
Certification
Perform peer review to
ensure validity and integrity
of submissions
Dissemination
Provide a medium for
discoveries and findings to
be shared
Preservation
Preserving the minutes and
record of science for
posterity
The role of scholarly publications
How do Publishers add value to the scientific and health community?
| 13
Scientific, technical and medical (STM) publishing
Scholarly publishing today
More than
2,000 STM
publishers
2.6 million
peer-reviewed
articles
>32,000
peer-reviewed
journals
| 14
The journal publishing cycle
Solicit &
manage
submissions
30-60%
rejected by
> 13,000
editors
Manage
Peer Review
557,000+
reviewers
Edit &
prepare
365,000
articles
accepted
Production
12.6 million
articles
available
Publish,
disseminate
and preserve
>700 million
downloads by
>11 million
researchers in
>120 countries!
July 2017
| 15
World-class publishing databases Online tools for researchers
Elsevier today.. Not only journals and books
Choosing a journal
| 17
▪ It indicates how many times the more recent papers in a
journal are cited on average in a given year
Selecting the right journal – consider journal metrics
The Impact Factor
The impact factor can give you a general guidance, but
it should NOT be the sole reason to choose a journal.
Other bibliometric indicators
▪ CiteScore, SCImago Journal Rank (SJR), Source
Normalized Impact per Paper (SNIP), Field Weighted
Citation Impact (FWCI), etc.
Coverage in Abstracting & Indexing databases
▪ Scopus, Medline, ChemAbstracts, INSPEC, etc.
| 18
Top journals, Lancet, Cell, Nature, Science
Field-specific top journals
Other field-specific journals
National journals
Do not just descend the Impact Factor ladder!
The Impact Factor can give general guidance, but it
should not be the only reason for choosing a journal.
| 19
Better to consult the Journal homepage to learn:
• Aims and scope
• Accepted types of articles
• Readership
• Current hot topics, (perhaps from Special Issues etc.)
Go through the abstracts of recent publications
Articles in your references will likely lead you to the right journal.
DO NOT gamble by submitting your manuscript to more
than one journal at a time. You will almost certainly be found out
and this would lead to an immediate rejection.
It is not (only) the Impact Factor, it is
(mainly) the right audience!
| 20
What should I look for in a journal?
▪ A journal that is read by colleagues that work in the
same field. Is it reaching your community?
▪ A journal that has the highest impact for that particular
field (not necessarily the highest IF!)
▪ A journal that has fast turnaround times (see journal
metrics available on journal home pages)
▪ A journal that is easy to find on the web. Where is the
journal indexed?
| 21
Where to publish?
• Ask help from your supervisor or colleagues
• Your supervisor (who is sometimes the corresponding author)
has at least co-responsibility for your work and should provide
guidance
• Your colleagues may already have experience of the journal
(or the Editor!)
• Shortlist a handful of candidate journals, and investigate them
further thoroughly:
Aims and scope
Scan recent tables of contents, etc.
Consult the Journal Homepage
| 23
Publishing in a new journal: beware predatory journals.
▪ Be diligent when assessing a new journal:
▪ Who is involved (and are they really)?
▪ What promises are made regarding peer review?
▪ Has the journal published articles yet (and are they any good)?
▪ What are the journal’s archiving policies if publication ceases?
Beware of “predatory” journals: https://predatoryjournals.com/about/ lists
over 1250 predatory publishers!
Currently there are over 10,000 predatory journals:
▪ …but remember that not all new journals are predatory.
▪ Remember that new journals will not yet be indexed in Medline/PubMed
or other services and will not have an impact factor.
For more questions to ask, see https://thinkchecksubmit.org/journals/
23
Ready to Write
| 25
• No matter how fascinating your
experimental results or how intriguing
your clinical observations, your work must
be published if it’s going to impact
science and advance the field.
• Even if your discovery is brilliant, bad
writing can render your findings
unpublishable or delay publication until it
is extensively revised
• “It’s not science until it’s published!”
First a simple truth
| 26
Planning your article:
Are you Ready to Publish?
Not ready:
Work has no
scientific interest
Ready:
Work advances
the field
| 27
Full articles
• Substantial, complete and comprehensive pieces of research
Is my message sufficient for a full article?
Letters or short communications
• Quick and early communications
Are my results so thrilling that they should be shown as soon
as possible?
Review papers
• Summaries of recent developments on a specific topic
• Often submitted by invitation
Types of manuscripts
Your supervisor or colleagues are also good sources for advice on
manuscript types. Sometimes outsiders can see the situation more clearly.
27
| 28
A Good Manuscript….
▪ Contains a scientific message that is novel, clear, useful,
relevant and exciting.
▪ Conveys the authors’ thoughts in a logical
manner such that the reader arrives at the
same conclusions as the author.
▪ Makes the editor feel like (s)he has learnt
something useful!
▪ Reviewers and editors can easily grasp the
significance
▪ Is well-organized and focused, and best of all,
NOT TOO LONG.
Content
+
Presentation
=
Success
Make it easy on the editor and
reviewers to understand your story
| 29
Do publishers correct language?
• No. It is the author’s responsibility to make sure their
paper is in its best possible form when submitted for
publication – Reviewers and Editors don’t do it!
• Publishers often provide resources for authors.
§ Some publishers may perform technical screening prior
to peer review.
§ http://webshop.elsevier.com/languageservices
| 30
The process of writing – building the article
Title, Abstract, and Keywords
Figures/Tables (your data)
Conclusion Introduction
Methods Results Discussion
| 31
▪ Attract the readers attention
▪ Use the fewest possible words
▪ Adequately describe content
▪ Identify the main issue / topic
▪ Do not use uncommon abbreviations
▪ Do not be flippant or ask a question….leave such
titles for conferences
▪ Avoid words like “novel”, “innovative” or “new”
Effective manuscript titles:
31
Article Title
Editors and reviewers don’t like titles that make no sense or fail to
represent the subject matter adequately.
Maybe even more importantly, you want the appropriate audience to
read your paper. If the title isn’t accurate, the right people may not
read it and the community might be unaware of your work. This
could even lead to lower citations than the paper deserves.
| 32
The abstract should just be one paragraph (10 sentences, ~250 words) and
should summarize the problem, the method, the results, and the
conclusions. In other words: what has been done & what are the main
findings. It should include important data (sample size, statistics) and results.
Beware of spin.
The abstract is the advertisement for your article and will be freely available
in PubMed, Medline, Embase, Scopus, etc. You want to make it as impactful
as possible.
As such the abstract could be viewed as the most important section of the
article —
It will certainly be read by the most people
Many authors write the abstract last so that it
accurately reflects the content of the paper.
Some journals now also ask for a graphical abstract.
Abstract
| 33
Introduction
• You are telling a story. The Introduction sets the scene.
• What was the purpose of this work?
• State the reason you did the study as clearly as possible.
• Do not attempt to summarize the whole field (it is not possible!)
• Quote what is necessary for background and give credit to previous
works (A Reviewer could have written a seminal article in the past!).
• Provide a perspective that is consistent with the journal where you
aim to submit.
• Typically, the last few sentences of the introduction should clearly state
the hypothesis or aim of the work being presented.
Introduction is especially important!
A high proportion of “lack of novelty” rejections are made
after reading abstract, introduction and conclusions.
| 34
Introduction (Continued)
• Give a clear motivation for the work. Explain why before explaining how.
• Explain what is novel compared to what is already available in the literature
• High level description of your approach. Why is it important? Why is it difficult?
• What are the alternatives? Why is yours different or better?
• What are the gaps and how are you going to fill them? At the end of the
introduction the reader knows the problem and maybe the solution / approach
you propose.
Editors want to:
Understand how your work is related to previous research
Be sure that your work builds upon the most recent insights
Be sure all relevant (international) work has been considered
| 35
Methods
• Often the easiest place to start writing the papers
• Describe how the research was done
• Methods or procedures used, study population and demographics (if needed).
• Give enough detail for critique and replication of procedures and confirmation
of results
• When using methods that have been published before, reference the publication
without repeating the description – but remember merely citing a previous article
may not be sufficient
• Identify the equipment and materials used: describe as objectively as possible, in
simple understandable terms
• Manufacturer name, location should be cited with brand name product or source
• Describe the statistical methods used
• Must state receipt of informed consent for studies using human subjects or materials
• Ethics permit details should also be included in this section.
Describe how the problem was studied
| 36
Results
• Describe your findings in a logical sequence
• Results should parallel your Methods section
• Provide some structure with subheadings – if necessary
• Don’t repeat what you’ve already stated
• Emphasis here is on the observations of your research --
NOT on the implications
• Check and recheck your data for accuracy and consistency
— make sure the numbers add up!
• Include results of the statistical analyses
• Include figures and tables
• Ironically, the RESULTS section can often be one of the
shortest sections of your paper
| 37
• Illustrations are critical because figures and tables are
the most efficient way to present results. They should
be used for ESSENTIAL data only
• Don’t repeat what is in text – should be
complementary
• Captions and legends should be self-explanatory;
figures should be able to stand alone. What is the
take home message?
• Maximize space; make sure final versions of figures
can be easily read. High quality reproduction required.
• Use consistent formatting between figures
• Plots: labels, scale and symbols
• Micrographs: scale bar, point out key features
Results: figures and tables
| 38
Results
This may be your total
work..
Do not try to fit
everything in!
But this is what should end
up in the paper
| 39
Discussion
The Discussion is where you interpret what your results mean. Provide
critical appraisal. This is the most important section of the article.
▪ Does not require complete review of the literature but should place the
study in context for the reader – but don’t repeat what is in the
Introduction. Make the Discussion correspond to the Results. But do not
reiterate the results.
▪ Why are your findings new and different?
▪ How are they relevant? Can you identify a mechanism to explain your
results or hypothesis?
Include:
▪ Interpretation of results considering any sources of bias or imprecision
▪ Context of results with current evidence and in relation to the purpose
of your study.
| 40
Discussion continued
It is where you have the chance to sell your data!
Many papers are rejected because the discussion is too
weak - You don’t want the reader to think .. “Ok, so what?”
Be careful not to use : >
▪ Statements that go beyond what the results can support
▪ Unspecific expressions such as “higher temperature” or “at a lower
rate”; do use quantitative descriptions – true also for
the Results section.
▪ Sudden introductions of new terms not mentioned previously
in your paper
Speculations on possible interpretations are allowed. But these should
be rooted in fact, rather than imagination. DO NOT ignore work in
disagreement with yours – confront it and convince the reader that you
are correct or better.
| 41
Conclusions
▪ Not the same as a summary! Do not just repeat the Abstract!
▪ Give conclusions that are supported by your results
▪ Do not overreach:
Statements such as “this method can potentially be used…”
do not belong to the conclusions (and often irritate referees).
▪ Try to end in a positive tone.
▪ Suggest future experiments that build on your work and
potentially mention those already underway
How the work advances the field from the present
state of knowledge
| 42
References
Cite the main scientific publications on which your work is based
Do not use too many references - but don’t be lazy
and only cite most recent reviews
Avoid excessive Self-Citation
Avoid excessive citations of publications
from the same region
Conform strictly to the style given in the guide for authors
Typically, there are more mistakes in the references than
any other part of the manuscript. It is one of the most
annoying problems and causes great headaches for
editors. Attention should be given in writing this section.
| 43
Acknowledgments
Ensures that those who helped in the research are recognized
Advisors and
Undergrad.
Support
Financial
Supporters
and Funding
Bodies
Proofreaders
and graphic
artists
Suppliers
who may
have donated
materials
| 44
Authorship
▪ Policies regarding authorship can vary.
▪ One example: the International Committee of Medical Journal Editors (“Vancouver
Group”) declared that an author must:
▪ substantially contribute to conception and design, or acquisition of data, or
analysis and interpretation of data;
▪ draft the article or revise it critically for important intellectual content; and
▪ give their approval of the final full version to be published.
▪ ALL 3 conditions must be fulfilled to be a credited author!
As editors and publishers some of the most common cases that we must
deal with are disputes over authorship, often between supervisors and
disgruntled students. These are often impossible for us to resolve.
“Dear Editor…I will be contacting the University Ombudsman and
someone will be in contact with you in the near future…”
| 45
Cover Letter
• Often overlooked by authors and filled quickly without thought
(a big mistake!).
• You have spent months working on your paper. Do not rush now!
• Explain the main findings and motivation
• Highlight the novelty and significance of results and relevance to the
journal.
• State final approval of all co-authors
• State prior reviews, revisions, etc.
• Note special requirements (suggest not to contact a particular referee,
for example). Suggest referees: experts, not collaborators
• State any conflicts of interest
Very important:
This is your chance to speak directly to the Editor
| 46
The peer review process
| 48
Peer review
The 4 possible outcomes
➢ Accept as it is
➢ Accept with minor or
moderate revision,
usually not back to
referees
➢ Major revision,
revised manuscript
usually goes back to
referees
➢ Reject
| 49
Peer review process - role and
tasks of reviewer
▪ The scientific publishing enterprise depends
largely on the quality and integrity of reviewers
▪ They are at the heart of the scientific publishing
process
▪ Reviewers should:
▪ Provide fair and unbiased comments on
the quality and value of an article
▪ Write reports in a collegial and
constructive manner with evidence-based
comments
▪ Treat all manuscripts in the same manner
and make a clear recommendation
| 50
First Decision: “Accepted” or “Rejected”
Accepted
• Very rare, but it happens
• Congratulations!
▪ Now wait for page proofs
and then for your article to
appear online and / or in
print
Rejected
• Probability 40-90% ...
• Do not despair
• It happens to everybody
• Try to understand WHY
• Straight out rejection without peer
review
• Consider reviewers’ advice
• Be self-critical
• If you submit to another journal, begin as
if it were a new manuscript
• Take advantage of the reviewers’
comments. They may review your
(resubmitted) manuscript again!
• Read the Guide for Authors of the
new journal, again and again.
| 51
• Poor research quality
• Poor manuscript development
• Poor English language and grammar
• Not the right journal chosen
• Journal has recently published similar work
• Nothing new in the work presented
Why are manuscripts rejected?
| 52
Managing a rejection
• A significant percentage of papers are
rejected by the Editor on submission
without going out to review.
• Don’t take it personally! It does not
necessarily mean the paper is not
a good one.
• Work with reviewers’ feedback to
strengthen the paper.
• Find another journal to submit your
paper.
| 53
First Decision: “Major” or “Minor” Revisions
Major revision
▪ The manuscript may finally be published in the journal
▪ Significant deficiencies must be corrected before acceptance
▪ Usually involves (significant) textual modifications and/or additional
experiments. Usually a 3 month period is allowed for a revised
manuscript
Minor revision
▪ Basically, the manuscript is worthy to be published
▪ Some elements in the manuscript must be clarified, restructured,
shortened (often) or expanded (rarely)
▪ Textual adaptations
▪ “Minor revision” does NOT guarantee acceptance after revision!
| 54
• Prepare a detailed letter of response
▪ Copy-paste reviewer comments and address one by one
• State specifically what changes you have made to the manuscript.
▪ Give page and line number.
• Provide a scientific response to the comment you accept; or a
convincing, solid and polite rebuttal to the point you think the
reviewer is wrong. Editors will give a fair hearing.
• If numerous changes are suggested revise the whole manuscript: not
just the parts the reviewers point out
• Minor revision does NOT guarantee acceptance after revision.
▪ Do not count on acceptance, but address all comments carefully
Manuscript revision: A great learning opportunity!
| 55
• Attention to details
• Check and double check your work
• Consider the reviewers’ comments
• English must be as good as possible
• Presentation is important
• Take your time with revision
• Acknowledge those who have helped you
• New, original and previously unpublished
• Critically evaluate your own manuscript
• Ethical rules must be obeyed
– Nigel John Cook
Editor-in-Chief, Ore Geology Reviews
What leads to acceptance?
Promoting and monitoring
your article performance
post acceptance
| 57
Information overload
7 hrs / week
average time
spent on literature
1970 2013
0
40M
▪ The volume of research articles is
growing at an accelerated pace
▪ For most researchers, it’s a real
challenge to keep up with the
literature
▪ Your job: make sure your research
doesn’t fall through the cracks!
According to one study, 40% of researchers surveyed said they had
not read the whole article for the last “important” article they had read.
57
| 58
1. Conferences
▪ Poster or oral presentation
▪ Prepare to network: look at the program to
see who will attend
▪ Connect with peers online, blog etc.
2. Media relations
▪ If you would like journalists, media outlets and the public to pick up on
your published paper, it can help to have a brief statement prepared
which explains the significance of your research and its key outcomes
in a simple statement
▪ Your institution’s communication’s channels / PR
▪ Contact your editor or you can send an email to the journal publisher.
▪ We may feature the article as an “Editor’s Choice” article.
Promoting your article
| 59
Promoting your article
• Twitter
▪ Follow other researchers
▪ Post regularly, respond promptly
▪ Retweet
Facebook
▪ Share images, videos, AudioSlides
▪ Link to your articles
▪ Discuss and ask for feedback
LinkedIn
▪ Share links to your articles, also in
relevant groups, for example, Mendeley
▪ Add images
▪ Add videos, AudioSlides
3. Social Media
Every day, scholarly articles receive 12,000 new mentions across
social media, news and blogs: that’s one mention every 7 seconds!
Keep it short, accurate, and relevant. Make it easy to find out more.
| 60
Monitoring your article
Article-level metrics:
▪ Feedback on downloads,
shares and citations
▪ Data about the geographic
locations and research
disciplines of your readers
▪ Search terms used to find
your publications
▪ A comparison of the
performance of your article
with other people’s articles
60
| 61
Monitoring the performance of your article:
Scopus
| 62
Monitoring the performance of your article - Scopus
Scopus gives a great overview at the article level of scholarly activity, social activity,
commentary and media mentions.
Ethics in publishing
| 64
Publish AND Perish! – if you break ethics rules
• International scientific ethics
have evolved over centuries
and are commonly held
throughout the world.
• Scientific ethics are not
considered to have national
variants or characteristics
▪ there is a single ethics
standard for science.
• Ethics problems with
scientific articles are on the
rise globally.
M. Errami & H. Garner
A tale of two citations
Nature 451 (2008): 397-399
| 65
Ethics Issues in Publishing
Scientific misconduct
▪ Falsification of results
Publication misconduct
▪ Plagiarism
- Different forms / severities
- The paper must be original to the authors
▪ Duplicate publication
▪ Duplicate submission
▪ Appropriate acknowledgement of prior research and
researchers
▪ Appropriate identification of all co-authors
▪ Conflict of interest
| 66
Data fabrication and falsification
“… the fabrication of research data … hits at the heart of
our responsibility to society, the reputation of our
institution, the trust between the public and the biomedical
research community, and our personal credibility and that
of our mentors, colleagues…”
“It can waste the time of others, trying to replicate false
data or designing experiments based on false premises,
and can lead to therapeutic errors. It can never be
tolerated.”
Professor Richard Hawkes
Department of Cell Biology and Anatomy
University of Calgary
The most dangerous of all falsehoods is a slightly distorted truth
G.C. Lichtenberg (1742-1799)
| 67
Falsification:
• Manipulation of research materials, equipment, processes
• Changes in / omission of data or results such that the research is
not accurately represented in the research record
This can include selecting data to fit a preconceived hypothesis:
▪ do not include (data from) an experiment because ‘it did not
work’, or
▪ show ‘representative’ images that do not reflect the total data
set, or
▪ simply shelve data that do not fit.
Data fabrication and falsification
| 68
Data Fabrication and Falsification - often go hand in hand
| 69
Ethics Issues in Publishing
Scientific misconduct
▪ Falsification of results
Publication misconduct
▪ Plagiarism
- Different forms / severities
- The paper must be original to the authors
▪ Duplicate publication
▪ Duplicate submission
▪ Appropriate acknowledgement of prior research and
researchers
▪ Appropriate identification of all co-authors
▪ Conflict of interest
| 70
What is plagiarism?
Plagiarism is the appropriation
of another person’s ideas, processes, results,
or words without giving appropriate credit, including
those obtained through confidential review of others’
research proposals and manuscripts.
Federal Office of Science and
Technology Policy, 1999
70
“Presenting the data or interpretations
of others without crediting them, and
thereby gaining for yourself the rewards
earned by others, is theft, .. it eliminates
the motivation of working scientists to
generate new data and interpretations.”
Prof. Bruce Railsback, Department of
Geology, University of Georgia
| 71
Sample of cases reported to Elsevier Journals publishing staff in 2012
Plagiarism high amongst ethics issues
Perhaps .....it is just the easiest ethical issue to detect
| 72
Plagiarism Detection Tools
• Elsevier is participating in 2 plagiarism detection schemes
▪ Turnitin (for universities) & Ithenticate (for publishers and
corporations)
▪ Manuscripts are checked against a database of 20 million peer
reviewed articles which have been donated by 50+ publishers,
including Elsevier.
▪ All post-1994 Elsevier journal content is included, and pre-1995
content is being added week-by-week
• Editors and reviewers
• Your own colleagues…
• Other “whistleblowers” …The walls have ears, it seems ...
| 73
2004
Publication ethics – Self-plagiarism
Same
colour
left and
right
Same
text
2003
| 74
Articles of which the authors have committed plagiarism or
fraud are not removed from ScienceDirect. Everybody who
downloads it will see the reason of retraction…
Retractions
Retractions
| 75
Consequences
Possible actions include:
▪ Written letters of concern and reprimand
▪ Article retractions
▪ Some form of disciplinary action on the part of the researcher’s
institute or funding body
Potential consequences can vary according to the
severity of the misconduct and the standards set by
the journal editors, institutions and funding bodies.
All Elsevier journals
are members of:
75
| 76
Publication ethics – How it can end .....
“I deeply regret the inconvenience and agony caused to you by my mistake
and request and beg for your pardon for the same. As such I am facing lot
many difficulties in my personal life and request you not to initiate any
further action against me.”
“I would like to request you that all the correspondence regarding my
publications may please be sent to me directly so that I can reply them
immediately. To avoid any further controversies, I have decided not to
publish any of my work in future.”
“Dear Editor,
Good day! Today, I find my student (named xxx) submit a paper to you
without my agreement. However, this paper is an unethical practice. This
boy has been punished. Please forgive us. Again, we are very, very sorry
to waste your time and work. Please withdraw this paper as soon as
possible.”
Some actual emails………..
| 77
Further reading at: >>
researcheracademy.com
elsevier.com/authors
elsevier.com/reviewers
elsevier.com/editors
Get Published – top tips on writing, reviewing and grant writing etc.
Publishing Ethics – top reasons to publish ethically
Get Noticed – new ways to promote your article and research
Understanding the Publishing Process with Elsevier – complete guide
Open access – definitions and options
Career Planning Guide – download in 12 languages
THANK YOU!

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ECR Workshop PDF version.pdf

  • 1. Introduction to scholarly publishing for researchers What are editors, reviewers and publishers looking for? Dale Seaton
  • 2. | 2 INTRODUCTIONS Dale Seaton ▪ BSc in Zoology, and PhD and 2 post doctoral positions in Veterinary Parasitology ▪ I have worked in scientific and medical publishing for 25 years and for Elsevier for 20 years in various roles. ▪ As Executive Publisher I am responsible for the management of 16 journals in the areas of Parasitology, Insect Science and Tropical Medicine. ▪ I also develop and organize new scientific conferences: eg. Impact of Environmental Changes on Infectious Diseases, Molecular Insect Science. ▪ I manage approximately 50 Editors around the world.
  • 3. | 3
  • 4. AGENDA 1: Brief Introduction to Thailand Research Output 2: Trends in publishing 3: Choosing a journal 4: Ready to write your paper 5: The peer review process 6: Promoting your article 7: Ethics in publishing
  • 6. | 6 All Thai research output (through academic communications), 2017-2022 Thailand Research Output, 2017-2022
  • 7. | 7 Thailand Research Output, 2017-2022
  • 8. | 8 Top Thai Institutions and Researchers. There are 106 recognized academic Institutions in Thailand.
  • 11. | 11 Origins of scholarly publishing Henry Oldenburg (1618- 1677) Founding Editor and Commercial Publisher of the first scientific journal March 6,1665 Philosophical Transactions of the Royal Society, the first true scholarly journal 1440 The ability to create multiple, bulk copies of literature becomes possible with the printing press.
  • 12. 12 Registration Timestamp to officially note who submitted scientific results first Certification Perform peer review to ensure validity and integrity of submissions Dissemination Provide a medium for discoveries and findings to be shared Preservation Preserving the minutes and record of science for posterity The role of scholarly publications How do Publishers add value to the scientific and health community?
  • 13. | 13 Scientific, technical and medical (STM) publishing Scholarly publishing today More than 2,000 STM publishers 2.6 million peer-reviewed articles >32,000 peer-reviewed journals
  • 14. | 14 The journal publishing cycle Solicit & manage submissions 30-60% rejected by > 13,000 editors Manage Peer Review 557,000+ reviewers Edit & prepare 365,000 articles accepted Production 12.6 million articles available Publish, disseminate and preserve >700 million downloads by >11 million researchers in >120 countries! July 2017
  • 15. | 15 World-class publishing databases Online tools for researchers Elsevier today.. Not only journals and books
  • 17. | 17 ▪ It indicates how many times the more recent papers in a journal are cited on average in a given year Selecting the right journal – consider journal metrics The Impact Factor The impact factor can give you a general guidance, but it should NOT be the sole reason to choose a journal. Other bibliometric indicators ▪ CiteScore, SCImago Journal Rank (SJR), Source Normalized Impact per Paper (SNIP), Field Weighted Citation Impact (FWCI), etc. Coverage in Abstracting & Indexing databases ▪ Scopus, Medline, ChemAbstracts, INSPEC, etc.
  • 18. | 18 Top journals, Lancet, Cell, Nature, Science Field-specific top journals Other field-specific journals National journals Do not just descend the Impact Factor ladder! The Impact Factor can give general guidance, but it should not be the only reason for choosing a journal.
  • 19. | 19 Better to consult the Journal homepage to learn: • Aims and scope • Accepted types of articles • Readership • Current hot topics, (perhaps from Special Issues etc.) Go through the abstracts of recent publications Articles in your references will likely lead you to the right journal. DO NOT gamble by submitting your manuscript to more than one journal at a time. You will almost certainly be found out and this would lead to an immediate rejection. It is not (only) the Impact Factor, it is (mainly) the right audience!
  • 20. | 20 What should I look for in a journal? ▪ A journal that is read by colleagues that work in the same field. Is it reaching your community? ▪ A journal that has the highest impact for that particular field (not necessarily the highest IF!) ▪ A journal that has fast turnaround times (see journal metrics available on journal home pages) ▪ A journal that is easy to find on the web. Where is the journal indexed?
  • 21. | 21 Where to publish? • Ask help from your supervisor or colleagues • Your supervisor (who is sometimes the corresponding author) has at least co-responsibility for your work and should provide guidance • Your colleagues may already have experience of the journal (or the Editor!) • Shortlist a handful of candidate journals, and investigate them further thoroughly: Aims and scope Scan recent tables of contents, etc.
  • 23. | 23 Publishing in a new journal: beware predatory journals. ▪ Be diligent when assessing a new journal: ▪ Who is involved (and are they really)? ▪ What promises are made regarding peer review? ▪ Has the journal published articles yet (and are they any good)? ▪ What are the journal’s archiving policies if publication ceases? Beware of “predatory” journals: https://predatoryjournals.com/about/ lists over 1250 predatory publishers! Currently there are over 10,000 predatory journals: ▪ …but remember that not all new journals are predatory. ▪ Remember that new journals will not yet be indexed in Medline/PubMed or other services and will not have an impact factor. For more questions to ask, see https://thinkchecksubmit.org/journals/ 23
  • 25. | 25 • No matter how fascinating your experimental results or how intriguing your clinical observations, your work must be published if it’s going to impact science and advance the field. • Even if your discovery is brilliant, bad writing can render your findings unpublishable or delay publication until it is extensively revised • “It’s not science until it’s published!” First a simple truth
  • 26. | 26 Planning your article: Are you Ready to Publish? Not ready: Work has no scientific interest Ready: Work advances the field
  • 27. | 27 Full articles • Substantial, complete and comprehensive pieces of research Is my message sufficient for a full article? Letters or short communications • Quick and early communications Are my results so thrilling that they should be shown as soon as possible? Review papers • Summaries of recent developments on a specific topic • Often submitted by invitation Types of manuscripts Your supervisor or colleagues are also good sources for advice on manuscript types. Sometimes outsiders can see the situation more clearly. 27
  • 28. | 28 A Good Manuscript…. ▪ Contains a scientific message that is novel, clear, useful, relevant and exciting. ▪ Conveys the authors’ thoughts in a logical manner such that the reader arrives at the same conclusions as the author. ▪ Makes the editor feel like (s)he has learnt something useful! ▪ Reviewers and editors can easily grasp the significance ▪ Is well-organized and focused, and best of all, NOT TOO LONG. Content + Presentation = Success Make it easy on the editor and reviewers to understand your story
  • 29. | 29 Do publishers correct language? • No. It is the author’s responsibility to make sure their paper is in its best possible form when submitted for publication – Reviewers and Editors don’t do it! • Publishers often provide resources for authors. § Some publishers may perform technical screening prior to peer review. § http://webshop.elsevier.com/languageservices
  • 30. | 30 The process of writing – building the article Title, Abstract, and Keywords Figures/Tables (your data) Conclusion Introduction Methods Results Discussion
  • 31. | 31 ▪ Attract the readers attention ▪ Use the fewest possible words ▪ Adequately describe content ▪ Identify the main issue / topic ▪ Do not use uncommon abbreviations ▪ Do not be flippant or ask a question….leave such titles for conferences ▪ Avoid words like “novel”, “innovative” or “new” Effective manuscript titles: 31 Article Title Editors and reviewers don’t like titles that make no sense or fail to represent the subject matter adequately. Maybe even more importantly, you want the appropriate audience to read your paper. If the title isn’t accurate, the right people may not read it and the community might be unaware of your work. This could even lead to lower citations than the paper deserves.
  • 32. | 32 The abstract should just be one paragraph (10 sentences, ~250 words) and should summarize the problem, the method, the results, and the conclusions. In other words: what has been done & what are the main findings. It should include important data (sample size, statistics) and results. Beware of spin. The abstract is the advertisement for your article and will be freely available in PubMed, Medline, Embase, Scopus, etc. You want to make it as impactful as possible. As such the abstract could be viewed as the most important section of the article — It will certainly be read by the most people Many authors write the abstract last so that it accurately reflects the content of the paper. Some journals now also ask for a graphical abstract. Abstract
  • 33. | 33 Introduction • You are telling a story. The Introduction sets the scene. • What was the purpose of this work? • State the reason you did the study as clearly as possible. • Do not attempt to summarize the whole field (it is not possible!) • Quote what is necessary for background and give credit to previous works (A Reviewer could have written a seminal article in the past!). • Provide a perspective that is consistent with the journal where you aim to submit. • Typically, the last few sentences of the introduction should clearly state the hypothesis or aim of the work being presented. Introduction is especially important! A high proportion of “lack of novelty” rejections are made after reading abstract, introduction and conclusions.
  • 34. | 34 Introduction (Continued) • Give a clear motivation for the work. Explain why before explaining how. • Explain what is novel compared to what is already available in the literature • High level description of your approach. Why is it important? Why is it difficult? • What are the alternatives? Why is yours different or better? • What are the gaps and how are you going to fill them? At the end of the introduction the reader knows the problem and maybe the solution / approach you propose. Editors want to: Understand how your work is related to previous research Be sure that your work builds upon the most recent insights Be sure all relevant (international) work has been considered
  • 35. | 35 Methods • Often the easiest place to start writing the papers • Describe how the research was done • Methods or procedures used, study population and demographics (if needed). • Give enough detail for critique and replication of procedures and confirmation of results • When using methods that have been published before, reference the publication without repeating the description – but remember merely citing a previous article may not be sufficient • Identify the equipment and materials used: describe as objectively as possible, in simple understandable terms • Manufacturer name, location should be cited with brand name product or source • Describe the statistical methods used • Must state receipt of informed consent for studies using human subjects or materials • Ethics permit details should also be included in this section. Describe how the problem was studied
  • 36. | 36 Results • Describe your findings in a logical sequence • Results should parallel your Methods section • Provide some structure with subheadings – if necessary • Don’t repeat what you’ve already stated • Emphasis here is on the observations of your research -- NOT on the implications • Check and recheck your data for accuracy and consistency — make sure the numbers add up! • Include results of the statistical analyses • Include figures and tables • Ironically, the RESULTS section can often be one of the shortest sections of your paper
  • 37. | 37 • Illustrations are critical because figures and tables are the most efficient way to present results. They should be used for ESSENTIAL data only • Don’t repeat what is in text – should be complementary • Captions and legends should be self-explanatory; figures should be able to stand alone. What is the take home message? • Maximize space; make sure final versions of figures can be easily read. High quality reproduction required. • Use consistent formatting between figures • Plots: labels, scale and symbols • Micrographs: scale bar, point out key features Results: figures and tables
  • 38. | 38 Results This may be your total work.. Do not try to fit everything in! But this is what should end up in the paper
  • 39. | 39 Discussion The Discussion is where you interpret what your results mean. Provide critical appraisal. This is the most important section of the article. ▪ Does not require complete review of the literature but should place the study in context for the reader – but don’t repeat what is in the Introduction. Make the Discussion correspond to the Results. But do not reiterate the results. ▪ Why are your findings new and different? ▪ How are they relevant? Can you identify a mechanism to explain your results or hypothesis? Include: ▪ Interpretation of results considering any sources of bias or imprecision ▪ Context of results with current evidence and in relation to the purpose of your study.
  • 40. | 40 Discussion continued It is where you have the chance to sell your data! Many papers are rejected because the discussion is too weak - You don’t want the reader to think .. “Ok, so what?” Be careful not to use : > ▪ Statements that go beyond what the results can support ▪ Unspecific expressions such as “higher temperature” or “at a lower rate”; do use quantitative descriptions – true also for the Results section. ▪ Sudden introductions of new terms not mentioned previously in your paper Speculations on possible interpretations are allowed. But these should be rooted in fact, rather than imagination. DO NOT ignore work in disagreement with yours – confront it and convince the reader that you are correct or better.
  • 41. | 41 Conclusions ▪ Not the same as a summary! Do not just repeat the Abstract! ▪ Give conclusions that are supported by your results ▪ Do not overreach: Statements such as “this method can potentially be used…” do not belong to the conclusions (and often irritate referees). ▪ Try to end in a positive tone. ▪ Suggest future experiments that build on your work and potentially mention those already underway How the work advances the field from the present state of knowledge
  • 42. | 42 References Cite the main scientific publications on which your work is based Do not use too many references - but don’t be lazy and only cite most recent reviews Avoid excessive Self-Citation Avoid excessive citations of publications from the same region Conform strictly to the style given in the guide for authors Typically, there are more mistakes in the references than any other part of the manuscript. It is one of the most annoying problems and causes great headaches for editors. Attention should be given in writing this section.
  • 43. | 43 Acknowledgments Ensures that those who helped in the research are recognized Advisors and Undergrad. Support Financial Supporters and Funding Bodies Proofreaders and graphic artists Suppliers who may have donated materials
  • 44. | 44 Authorship ▪ Policies regarding authorship can vary. ▪ One example: the International Committee of Medical Journal Editors (“Vancouver Group”) declared that an author must: ▪ substantially contribute to conception and design, or acquisition of data, or analysis and interpretation of data; ▪ draft the article or revise it critically for important intellectual content; and ▪ give their approval of the final full version to be published. ▪ ALL 3 conditions must be fulfilled to be a credited author! As editors and publishers some of the most common cases that we must deal with are disputes over authorship, often between supervisors and disgruntled students. These are often impossible for us to resolve. “Dear Editor…I will be contacting the University Ombudsman and someone will be in contact with you in the near future…”
  • 45. | 45 Cover Letter • Often overlooked by authors and filled quickly without thought (a big mistake!). • You have spent months working on your paper. Do not rush now! • Explain the main findings and motivation • Highlight the novelty and significance of results and relevance to the journal. • State final approval of all co-authors • State prior reviews, revisions, etc. • Note special requirements (suggest not to contact a particular referee, for example). Suggest referees: experts, not collaborators • State any conflicts of interest Very important: This is your chance to speak directly to the Editor
  • 46. | 46
  • 47. The peer review process
  • 48. | 48 Peer review The 4 possible outcomes ➢ Accept as it is ➢ Accept with minor or moderate revision, usually not back to referees ➢ Major revision, revised manuscript usually goes back to referees ➢ Reject
  • 49. | 49 Peer review process - role and tasks of reviewer ▪ The scientific publishing enterprise depends largely on the quality and integrity of reviewers ▪ They are at the heart of the scientific publishing process ▪ Reviewers should: ▪ Provide fair and unbiased comments on the quality and value of an article ▪ Write reports in a collegial and constructive manner with evidence-based comments ▪ Treat all manuscripts in the same manner and make a clear recommendation
  • 50. | 50 First Decision: “Accepted” or “Rejected” Accepted • Very rare, but it happens • Congratulations! ▪ Now wait for page proofs and then for your article to appear online and / or in print Rejected • Probability 40-90% ... • Do not despair • It happens to everybody • Try to understand WHY • Straight out rejection without peer review • Consider reviewers’ advice • Be self-critical • If you submit to another journal, begin as if it were a new manuscript • Take advantage of the reviewers’ comments. They may review your (resubmitted) manuscript again! • Read the Guide for Authors of the new journal, again and again.
  • 51. | 51 • Poor research quality • Poor manuscript development • Poor English language and grammar • Not the right journal chosen • Journal has recently published similar work • Nothing new in the work presented Why are manuscripts rejected?
  • 52. | 52 Managing a rejection • A significant percentage of papers are rejected by the Editor on submission without going out to review. • Don’t take it personally! It does not necessarily mean the paper is not a good one. • Work with reviewers’ feedback to strengthen the paper. • Find another journal to submit your paper.
  • 53. | 53 First Decision: “Major” or “Minor” Revisions Major revision ▪ The manuscript may finally be published in the journal ▪ Significant deficiencies must be corrected before acceptance ▪ Usually involves (significant) textual modifications and/or additional experiments. Usually a 3 month period is allowed for a revised manuscript Minor revision ▪ Basically, the manuscript is worthy to be published ▪ Some elements in the manuscript must be clarified, restructured, shortened (often) or expanded (rarely) ▪ Textual adaptations ▪ “Minor revision” does NOT guarantee acceptance after revision!
  • 54. | 54 • Prepare a detailed letter of response ▪ Copy-paste reviewer comments and address one by one • State specifically what changes you have made to the manuscript. ▪ Give page and line number. • Provide a scientific response to the comment you accept; or a convincing, solid and polite rebuttal to the point you think the reviewer is wrong. Editors will give a fair hearing. • If numerous changes are suggested revise the whole manuscript: not just the parts the reviewers point out • Minor revision does NOT guarantee acceptance after revision. ▪ Do not count on acceptance, but address all comments carefully Manuscript revision: A great learning opportunity!
  • 55. | 55 • Attention to details • Check and double check your work • Consider the reviewers’ comments • English must be as good as possible • Presentation is important • Take your time with revision • Acknowledge those who have helped you • New, original and previously unpublished • Critically evaluate your own manuscript • Ethical rules must be obeyed – Nigel John Cook Editor-in-Chief, Ore Geology Reviews What leads to acceptance?
  • 56. Promoting and monitoring your article performance post acceptance
  • 57. | 57 Information overload 7 hrs / week average time spent on literature 1970 2013 0 40M ▪ The volume of research articles is growing at an accelerated pace ▪ For most researchers, it’s a real challenge to keep up with the literature ▪ Your job: make sure your research doesn’t fall through the cracks! According to one study, 40% of researchers surveyed said they had not read the whole article for the last “important” article they had read. 57
  • 58. | 58 1. Conferences ▪ Poster or oral presentation ▪ Prepare to network: look at the program to see who will attend ▪ Connect with peers online, blog etc. 2. Media relations ▪ If you would like journalists, media outlets and the public to pick up on your published paper, it can help to have a brief statement prepared which explains the significance of your research and its key outcomes in a simple statement ▪ Your institution’s communication’s channels / PR ▪ Contact your editor or you can send an email to the journal publisher. ▪ We may feature the article as an “Editor’s Choice” article. Promoting your article
  • 59. | 59 Promoting your article • Twitter ▪ Follow other researchers ▪ Post regularly, respond promptly ▪ Retweet Facebook ▪ Share images, videos, AudioSlides ▪ Link to your articles ▪ Discuss and ask for feedback LinkedIn ▪ Share links to your articles, also in relevant groups, for example, Mendeley ▪ Add images ▪ Add videos, AudioSlides 3. Social Media Every day, scholarly articles receive 12,000 new mentions across social media, news and blogs: that’s one mention every 7 seconds! Keep it short, accurate, and relevant. Make it easy to find out more.
  • 60. | 60 Monitoring your article Article-level metrics: ▪ Feedback on downloads, shares and citations ▪ Data about the geographic locations and research disciplines of your readers ▪ Search terms used to find your publications ▪ A comparison of the performance of your article with other people’s articles 60
  • 61. | 61 Monitoring the performance of your article: Scopus
  • 62. | 62 Monitoring the performance of your article - Scopus Scopus gives a great overview at the article level of scholarly activity, social activity, commentary and media mentions.
  • 64. | 64 Publish AND Perish! – if you break ethics rules • International scientific ethics have evolved over centuries and are commonly held throughout the world. • Scientific ethics are not considered to have national variants or characteristics ▪ there is a single ethics standard for science. • Ethics problems with scientific articles are on the rise globally. M. Errami & H. Garner A tale of two citations Nature 451 (2008): 397-399
  • 65. | 65 Ethics Issues in Publishing Scientific misconduct ▪ Falsification of results Publication misconduct ▪ Plagiarism - Different forms / severities - The paper must be original to the authors ▪ Duplicate publication ▪ Duplicate submission ▪ Appropriate acknowledgement of prior research and researchers ▪ Appropriate identification of all co-authors ▪ Conflict of interest
  • 66. | 66 Data fabrication and falsification “… the fabrication of research data … hits at the heart of our responsibility to society, the reputation of our institution, the trust between the public and the biomedical research community, and our personal credibility and that of our mentors, colleagues…” “It can waste the time of others, trying to replicate false data or designing experiments based on false premises, and can lead to therapeutic errors. It can never be tolerated.” Professor Richard Hawkes Department of Cell Biology and Anatomy University of Calgary The most dangerous of all falsehoods is a slightly distorted truth G.C. Lichtenberg (1742-1799)
  • 67. | 67 Falsification: • Manipulation of research materials, equipment, processes • Changes in / omission of data or results such that the research is not accurately represented in the research record This can include selecting data to fit a preconceived hypothesis: ▪ do not include (data from) an experiment because ‘it did not work’, or ▪ show ‘representative’ images that do not reflect the total data set, or ▪ simply shelve data that do not fit. Data fabrication and falsification
  • 68. | 68 Data Fabrication and Falsification - often go hand in hand
  • 69. | 69 Ethics Issues in Publishing Scientific misconduct ▪ Falsification of results Publication misconduct ▪ Plagiarism - Different forms / severities - The paper must be original to the authors ▪ Duplicate publication ▪ Duplicate submission ▪ Appropriate acknowledgement of prior research and researchers ▪ Appropriate identification of all co-authors ▪ Conflict of interest
  • 70. | 70 What is plagiarism? Plagiarism is the appropriation of another person’s ideas, processes, results, or words without giving appropriate credit, including those obtained through confidential review of others’ research proposals and manuscripts. Federal Office of Science and Technology Policy, 1999 70 “Presenting the data or interpretations of others without crediting them, and thereby gaining for yourself the rewards earned by others, is theft, .. it eliminates the motivation of working scientists to generate new data and interpretations.” Prof. Bruce Railsback, Department of Geology, University of Georgia
  • 71. | 71 Sample of cases reported to Elsevier Journals publishing staff in 2012 Plagiarism high amongst ethics issues Perhaps .....it is just the easiest ethical issue to detect
  • 72. | 72 Plagiarism Detection Tools • Elsevier is participating in 2 plagiarism detection schemes ▪ Turnitin (for universities) & Ithenticate (for publishers and corporations) ▪ Manuscripts are checked against a database of 20 million peer reviewed articles which have been donated by 50+ publishers, including Elsevier. ▪ All post-1994 Elsevier journal content is included, and pre-1995 content is being added week-by-week • Editors and reviewers • Your own colleagues… • Other “whistleblowers” …The walls have ears, it seems ...
  • 73. | 73 2004 Publication ethics – Self-plagiarism Same colour left and right Same text 2003
  • 74. | 74 Articles of which the authors have committed plagiarism or fraud are not removed from ScienceDirect. Everybody who downloads it will see the reason of retraction… Retractions Retractions
  • 75. | 75 Consequences Possible actions include: ▪ Written letters of concern and reprimand ▪ Article retractions ▪ Some form of disciplinary action on the part of the researcher’s institute or funding body Potential consequences can vary according to the severity of the misconduct and the standards set by the journal editors, institutions and funding bodies. All Elsevier journals are members of: 75
  • 76. | 76 Publication ethics – How it can end ..... “I deeply regret the inconvenience and agony caused to you by my mistake and request and beg for your pardon for the same. As such I am facing lot many difficulties in my personal life and request you not to initiate any further action against me.” “I would like to request you that all the correspondence regarding my publications may please be sent to me directly so that I can reply them immediately. To avoid any further controversies, I have decided not to publish any of my work in future.” “Dear Editor, Good day! Today, I find my student (named xxx) submit a paper to you without my agreement. However, this paper is an unethical practice. This boy has been punished. Please forgive us. Again, we are very, very sorry to waste your time and work. Please withdraw this paper as soon as possible.” Some actual emails………..
  • 77. | 77 Further reading at: >> researcheracademy.com elsevier.com/authors elsevier.com/reviewers elsevier.com/editors Get Published – top tips on writing, reviewing and grant writing etc. Publishing Ethics – top reasons to publish ethically Get Noticed – new ways to promote your article and research Understanding the Publishing Process with Elsevier – complete guide Open access – definitions and options Career Planning Guide – download in 12 languages THANK YOU!