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COMPETENCY GROUP1A
ALLADO | CABATINGAN | LAGARTO | FABROS
General
Pathology
Jens Martensson
The Cell as a Unit
of Health and
Disease
2
Jens Martensson 3
BACKGROUND
Pathology
patho – suffering; logos – study
Cellular Pathology – Virchow – study of cellular abnormalities
Jens Martensson
Genome
• 🠶 Human genome contain roughly 3.2
billion DNA base pairs, only 1.5% (20,000) of
which code for proteins (coding genes), the
remaining are non-coding genes.
• 🠶 This coding genome is similar across
species, and the diversity lies in the non-
coding genome.
• 🠶 As the complexity of organism increases
so does the proportion of non-coding genome.
4
Jens Martensson
The organization of nuclear DNA
VS.
5
Jens Martensson
Central dogma of molecular biology
$2Bn
20YY 20YY
6
Jens Martensson 7
WE ARE 99.9% SIMILAR
❑ ANY TWO INDIVIDUALS – 99.9
❑ HUMAN AND CHIMPS – 99.5
❑ HUMAN AND CAT - 90
❑ HUMAN AND CHICKEN – 60
❖ THE DIFFERENCE IS DUE TO
VARIATIONS IN GENOMES CALLED:
▪ SNP – SINGLE NUCLEOTIDE
POLYMORPHISM
▪ CNV – COPY NUMBER VARIATION
Jens Martensson
Jens Martensson 9
EPIGENETIC FACTORS
🠶 HISTONES
🠶 DNA in cell is wound around these proteins
🠶 Not uniformly wound – Heterochromatin and Euchromatin
🠶 Histone acetylation and methylation can cause neoplasia
🠶 NON CODING RNAs – microRNAs and long RNAs
Jens Martensson 10
miRNA
🠶 Primarily involved in gene silencing, if doesn’t work, can lead to
neoplasia
🠶 That means it’s a tumor suppressor
Jens Martensson 11
Long non coding RNA (lncRNA)
Jens Martensson 12
🠶 A cell can survive only if the following housekeeping functions are
performed on a regular basis
🠶 protection from the environment,
🠶 nutrient acquisition,
🠶 communication,
🠶 movement,
🠶 renewal of senescent molecules,
🠶 Molecular catabolism,
🠶 energy generation.
Cellular Housekeeping
Jens Martensson 13
PLASMA MEMBRANE
Jens Martensson 14
Passive diffusion
Active transport
Oxygen
Carbon dioxide
Steroid based –
estradiol, Vit D
Water
Ethanol
Urea
transferrin and
low-density
lipoprotein (LDL)
Jens Martensson
Cell Injury, Cell
Death,
and Adaptations
15
Jens Martensson 16
Stages of the cellular response to stress and
injurious stimuli
Jens Martensson 17
Cellular responses to Injury
Jens Martensson 18
Cellular responses to Injury
Jens Martensson
➔Hypoxia
➔Physical Agents
➔Chemical Agents
➔Infectious agents
➔Immunologic reactions
➔Nutritional Imbalances
➔Genetic derangements
19
Causes and morphologic alterations of Cell
Injury
Jens Martensson
Reversible Injury
- Cell swelling
- Fatty change
20
REVERSIBLE CELL INJURY
Jens Martensson 21
IRREVERSIBLE CELL INJURY
Jens Martensson 22
Mechanisms of Cell Injury
Jens Martensson
• Ischemic and Hypoxic Injury
• Ischemia-Reperfusion Injury
• Chemical (Toxic) Injury
23
Examples of Cell Injury and Necrosis
Jens Martensson 24
APOPTOSIS
Jens Martensson
• Cell shrinkage,
• Chromatin condensation and fragmentation,
• Cellular blebbing and fragmentation into apoptotic bodies, and
• Phagocytosis of apoptotic bodies by adjacent healthy cells or
macrophages.
25
Morphologic Features Of Apoptosis
Jens Martensson
Apoptosis is a cascade of molecular events that can be initiated by a
variety of triggers.
• Initiation phase, when caspases become active
o Intrinsic mitochondrial pathway
o Extrinsic death receptor-mediated pathway
• Execution phase, when the enzymes cause cell death.
26
Mechanisms of Apoptosis
Jens Martensson 27
Mechanisms of Apoptosis
Jens Martensson
1. Growth Factor Deprivation
2. DNA Damage
3. Protein Misfolding
4. TNF Family Receptors
5. Cytotoxic T Lymphocytes
6. Disorders Associated with Dysregulated Apoptosis
a. Disorders with defective apoptosis and increased cell survival
i. cancers
ii. autoimmune disorders
b. Disorders with increased apoptosis and excessive cell death
i. neurodegenerative diseases
ii. ischemic injury
iii. death of virus-infected cells
28
Apoptosis in Health and Disease
Jens Martensson 29
NECROPTOSIS
Also called “programmed necrosis,” necroptosis:
• Morphologically resembles necrosis
• Mechanistically resembles apoptosis
• Activate receptor-interacting protein kinases
• Evokes an inflammatory response.
Necroptosis is involved in physiologic events as well as pathologic
processes. It is also a fail-safe form of cell death for certain viral
infections that encode caspase inhibitors.
Jens Martensson
“Self-eating”
• Autophagy is a characteristic feature of atrophy but is also involved in the
normal homeostatic turnover of organelles and in clearing intracellular
aggregates that occur with aging, cellular stress, and disease states.
• It also plays a role in host defense by degrading certain intracellular
pathogens.
• It can also be associated with cell death, as in several neurodegenerative
disorders.
30
AUTOPHAGY
Jens Martensson
Cells may accumulate abnormal amounts of various substances.
• A normal endogenous substance is produced at a normal rate,
with the metabolic rate inadequate to remove it.
• An abnormal endogenous substance accumulates because of
defective folding or transport and inadequate degradation.
• A normal substance accumulates because of genetic or
acquired defects in its metabolism.
• Abnormal exogenous substances may accumulate in normal
cells because they lack the machinery to degrade such
substances
31
INTRACELLULAR ACCUMULATIONS
Jens Martensson
1. Lipids
a. Steatosis
b. Cholesterol and Cholesterol Esters
2. Proteins
3. Hyaline Change
4. Glycogen
5. Pigments
32
INTRACELLULAR ACCUMULATIONS
Jens Martensson
The abnormal tissue deposition of calcium salts:
• Dystrophic calcification arises in nonviable tissues in the
presence of normal calcium serum levels occurs in arteries
in atherosclerosis, in damaged heart valves, and in areas of
necrosis
• Metastatic calcification happens in viable tissues in the
setting of hypercalcemia. calcium deposits occur as
amorphous basophilic densities that can be present widely
throughout the body.
33
PATHOLOGIC CALCIFICATION
Jens Martensson 34
CELLULAR AGING
Cellular Aging—reflecting the progressive accumulation of sublethal
cellular and molecular damage due to both genetic and exogenous
influences leading to cell death and diminished capacity to respond to
injury; it is a critical component of the aging of the entire organism.
Aging can potentially be parsed into definable mechanistic alterations:
• Genomic instability
• Cellular senescence
• Defective protein homeostasis
• Deregulated nutrient sensing
Jens Martensson 35
CELLULAR AGING
Jens Martensson
Inflammation and
Repair
36
Jens Martensson
Inflammation is a response of vascularized
tissues that delivers leukocytes and molecules
of host defense from the circulation to the
sites of infection and cell damage in order to
eliminate the offending agents.
37
Inflammation
Jens Martensson 38
Five classic clinical signs of inflammation
Jens Martensson 39
Causes of Acute and Chronic Inflammation
Causes:
❖Infection
❖Tissue Necrosis
❖Foreign Bodies
❖Immune reactions
Jens Martensson 40
Features of Acute and Chronic Inflammation
Jens Martensson 41
ACUTE INFLAMMATION
Jens Martensson
➔ Changes in Vascular Flow and
Caliber
➔ Increased Vascular Permeability
(Vascular Leakage)
➔ Responses of Lymphatic Vessels
and Lymph Nodes
42
Reactions of Blood Vessels in Acute Inflammation
Jens Martensson 43
Leukocyte Recruitment to Sites of Inflammation
Jens Martensson 44
Leukocyte Adhesion and Migration
Jens Martensson
After exiting the circulation, leukocytes
move in the tissues toward the site of
injury by a process called chemotaxis,
which is defined as locomotion along
a chemical gradient.
45
Chemotaxis of Leukocytes
Jens Martensson
46
Phagocytosis and Clearance of the Offending
Agents
Jens Martensson
Vasoactive Amines
- Histamine
- Serotonin
Arachidonic Acid Metabolites
- Prostaglandins
47
Mediators of inflammation
Jens Martensson
Cytokines
- proteins produced principally by activated lymphocytes and
macrophages
- modulate the function of other cell types
- Other Cytokines in Acute Inflammation : IL-6 and IL-7
Chemokines
- cytokines that also stimulate leukocyte movement (chemotaxis)
- classified into four major classes: CXC chemokines, CC chemokines,
C chemokines and CX3C chemokine is fractalkine
48
Cytokines and Chemokines
Jens Martensson 49
COMPLEMENT SYSTEM
Jens Martensson
• Platelet-Activating Factor
• Product of Coagulation
• Kinins
• Neuropeptides
50
OTHER MEDIATORS OF INFLAMMATION
Jens Martensson
• Serous Inflammation
• Fibrinous Inflammation
• Purulent (Suppurative) Inflammation and
Abscess
• Ulcers
51
MORPHOLOGIC PATTERN OF ACUTE INFLAMMATION
Jens Martensson
MORPHOLOGIC FEATURES
• Infiltration with mononuclear inflammatory cells, including
macrophages, lymphocytes, and plasma cells
• Tissue destruction, induced by persistent injury and/or
inflammation
• Attempts at healing by connective tissue replacement,
accomplished by vascular proliferation (angiogenesis) and
fibrosis
52
CHRONIC INFLAMMATION
Jens Martensson
Cells and Mediators in Chronic Inflammation:
• Macrophages
• Lymphocytes
• Eosinophils
• Mast cells
53
CHRONIC INFLAMMATION
Jens Martensson 54
Jens Martensson
Systemic Effects of Inflammation
These represent responses to cytokines produced either by bacterial
products or by other inflammatory stimuli.
The acute phase response consists of several clinical and pathologic
changes:
• Fever
• Acute Phase Proteins
• Leukocytosis
• Sepsis
55
SYSTEMIC EFFECT OF INFLAMMATION
Jens Martensson
OVERVIEW OF TISSUE REPAIR
regeneration can occur through the proliferation of adjacent surviving
cells or through the activity of tissue stem cells.
In most cases healing is some combination of regeneration and scar;
the outcome will be affected by
(1) proliferative capacity of the damaged tissue,
(2) integrity of the ECM, and
(3) the chronicity of the associated inflammation.
56
TISSUE REPAIR
Jens Martensson 57
Liver Regeneration Through Hepatocyte Proliferation
Jens Martensson
STEPS IN REPAIR BY SCAR
FORMATION
58
REPAIR BY CONNECTIVE
TISSUE DEPOSITION
Jens Martensson
Angiogenesis is the process of new blood vessel growth
from existing vessels.
• Vasodilation in response to NO and increased permeability
in response to VEGF
• Separation of pericytes from the vessel wall and basement
membrane breakdown allowing vessel sprouting
• Migration of endothelial cells toward the area of tissue
injury
• Proliferation of endothelial cells
• Remodeling into capillary tubes
• Recruitment of periendothelial cells
• Suppression of endothelial proliferation and migration,
and
• redeposition of the basement membrane
59
ANGIOGENESIS
Jens Martensson
• Nutritional status of the host.
• Metabolic status
• Circulatory status or vascular adequacy.
• Hormones
• Size and location: Well-vascularized tissues heal faster;
Inflammation in tissue spaces develops exudates that can either
resolve or undergo organization.
• Type of tissue: Labile and stable tissues have better tissue
regeneration, whereas permanent tissues form only scar.
• Local factors that delay healing include infections, ischemia,
• mechanical forces, and foreign bodies.
60
FACTORS THAT INFLUENCE TISSUE REPAIR
Jens Martensson
• Deficient Scar Formation
• Excessive Repair
• Formation of Contractures
61
ABNORMALITIES IN TISSUE REPAIR
Thank
You
Jens Martensson
jens@bellowscollege.com
Launch
Launch

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[Pathology] Chapter 1 - 3 Report.pptx

  • 1. COMPETENCY GROUP1A ALLADO | CABATINGAN | LAGARTO | FABROS General Pathology
  • 2. Jens Martensson The Cell as a Unit of Health and Disease 2
  • 3. Jens Martensson 3 BACKGROUND Pathology patho – suffering; logos – study Cellular Pathology – Virchow – study of cellular abnormalities
  • 4. Jens Martensson Genome • 🠶 Human genome contain roughly 3.2 billion DNA base pairs, only 1.5% (20,000) of which code for proteins (coding genes), the remaining are non-coding genes. • 🠶 This coding genome is similar across species, and the diversity lies in the non- coding genome. • 🠶 As the complexity of organism increases so does the proportion of non-coding genome. 4
  • 5. Jens Martensson The organization of nuclear DNA VS. 5
  • 6. Jens Martensson Central dogma of molecular biology $2Bn 20YY 20YY 6
  • 7. Jens Martensson 7 WE ARE 99.9% SIMILAR ❑ ANY TWO INDIVIDUALS – 99.9 ❑ HUMAN AND CHIMPS – 99.5 ❑ HUMAN AND CAT - 90 ❑ HUMAN AND CHICKEN – 60 ❖ THE DIFFERENCE IS DUE TO VARIATIONS IN GENOMES CALLED: ▪ SNP – SINGLE NUCLEOTIDE POLYMORPHISM ▪ CNV – COPY NUMBER VARIATION
  • 9. Jens Martensson 9 EPIGENETIC FACTORS 🠶 HISTONES 🠶 DNA in cell is wound around these proteins 🠶 Not uniformly wound – Heterochromatin and Euchromatin 🠶 Histone acetylation and methylation can cause neoplasia 🠶 NON CODING RNAs – microRNAs and long RNAs
  • 10. Jens Martensson 10 miRNA 🠶 Primarily involved in gene silencing, if doesn’t work, can lead to neoplasia 🠶 That means it’s a tumor suppressor
  • 11. Jens Martensson 11 Long non coding RNA (lncRNA)
  • 12. Jens Martensson 12 🠶 A cell can survive only if the following housekeeping functions are performed on a regular basis 🠶 protection from the environment, 🠶 nutrient acquisition, 🠶 communication, 🠶 movement, 🠶 renewal of senescent molecules, 🠶 Molecular catabolism, 🠶 energy generation. Cellular Housekeeping
  • 14. Jens Martensson 14 Passive diffusion Active transport Oxygen Carbon dioxide Steroid based – estradiol, Vit D Water Ethanol Urea transferrin and low-density lipoprotein (LDL)
  • 15. Jens Martensson Cell Injury, Cell Death, and Adaptations 15
  • 16. Jens Martensson 16 Stages of the cellular response to stress and injurious stimuli
  • 17. Jens Martensson 17 Cellular responses to Injury
  • 18. Jens Martensson 18 Cellular responses to Injury
  • 19. Jens Martensson ➔Hypoxia ➔Physical Agents ➔Chemical Agents ➔Infectious agents ➔Immunologic reactions ➔Nutritional Imbalances ➔Genetic derangements 19 Causes and morphologic alterations of Cell Injury
  • 20. Jens Martensson Reversible Injury - Cell swelling - Fatty change 20 REVERSIBLE CELL INJURY
  • 23. Jens Martensson • Ischemic and Hypoxic Injury • Ischemia-Reperfusion Injury • Chemical (Toxic) Injury 23 Examples of Cell Injury and Necrosis
  • 25. Jens Martensson • Cell shrinkage, • Chromatin condensation and fragmentation, • Cellular blebbing and fragmentation into apoptotic bodies, and • Phagocytosis of apoptotic bodies by adjacent healthy cells or macrophages. 25 Morphologic Features Of Apoptosis
  • 26. Jens Martensson Apoptosis is a cascade of molecular events that can be initiated by a variety of triggers. • Initiation phase, when caspases become active o Intrinsic mitochondrial pathway o Extrinsic death receptor-mediated pathway • Execution phase, when the enzymes cause cell death. 26 Mechanisms of Apoptosis
  • 28. Jens Martensson 1. Growth Factor Deprivation 2. DNA Damage 3. Protein Misfolding 4. TNF Family Receptors 5. Cytotoxic T Lymphocytes 6. Disorders Associated with Dysregulated Apoptosis a. Disorders with defective apoptosis and increased cell survival i. cancers ii. autoimmune disorders b. Disorders with increased apoptosis and excessive cell death i. neurodegenerative diseases ii. ischemic injury iii. death of virus-infected cells 28 Apoptosis in Health and Disease
  • 29. Jens Martensson 29 NECROPTOSIS Also called “programmed necrosis,” necroptosis: • Morphologically resembles necrosis • Mechanistically resembles apoptosis • Activate receptor-interacting protein kinases • Evokes an inflammatory response. Necroptosis is involved in physiologic events as well as pathologic processes. It is also a fail-safe form of cell death for certain viral infections that encode caspase inhibitors.
  • 30. Jens Martensson “Self-eating” • Autophagy is a characteristic feature of atrophy but is also involved in the normal homeostatic turnover of organelles and in clearing intracellular aggregates that occur with aging, cellular stress, and disease states. • It also plays a role in host defense by degrading certain intracellular pathogens. • It can also be associated with cell death, as in several neurodegenerative disorders. 30 AUTOPHAGY
  • 31. Jens Martensson Cells may accumulate abnormal amounts of various substances. • A normal endogenous substance is produced at a normal rate, with the metabolic rate inadequate to remove it. • An abnormal endogenous substance accumulates because of defective folding or transport and inadequate degradation. • A normal substance accumulates because of genetic or acquired defects in its metabolism. • Abnormal exogenous substances may accumulate in normal cells because they lack the machinery to degrade such substances 31 INTRACELLULAR ACCUMULATIONS
  • 32. Jens Martensson 1. Lipids a. Steatosis b. Cholesterol and Cholesterol Esters 2. Proteins 3. Hyaline Change 4. Glycogen 5. Pigments 32 INTRACELLULAR ACCUMULATIONS
  • 33. Jens Martensson The abnormal tissue deposition of calcium salts: • Dystrophic calcification arises in nonviable tissues in the presence of normal calcium serum levels occurs in arteries in atherosclerosis, in damaged heart valves, and in areas of necrosis • Metastatic calcification happens in viable tissues in the setting of hypercalcemia. calcium deposits occur as amorphous basophilic densities that can be present widely throughout the body. 33 PATHOLOGIC CALCIFICATION
  • 34. Jens Martensson 34 CELLULAR AGING Cellular Aging—reflecting the progressive accumulation of sublethal cellular and molecular damage due to both genetic and exogenous influences leading to cell death and diminished capacity to respond to injury; it is a critical component of the aging of the entire organism. Aging can potentially be parsed into definable mechanistic alterations: • Genomic instability • Cellular senescence • Defective protein homeostasis • Deregulated nutrient sensing
  • 37. Jens Martensson Inflammation is a response of vascularized tissues that delivers leukocytes and molecules of host defense from the circulation to the sites of infection and cell damage in order to eliminate the offending agents. 37 Inflammation
  • 38. Jens Martensson 38 Five classic clinical signs of inflammation
  • 39. Jens Martensson 39 Causes of Acute and Chronic Inflammation Causes: ❖Infection ❖Tissue Necrosis ❖Foreign Bodies ❖Immune reactions
  • 40. Jens Martensson 40 Features of Acute and Chronic Inflammation
  • 41. Jens Martensson 41 ACUTE INFLAMMATION
  • 42. Jens Martensson ➔ Changes in Vascular Flow and Caliber ➔ Increased Vascular Permeability (Vascular Leakage) ➔ Responses of Lymphatic Vessels and Lymph Nodes 42 Reactions of Blood Vessels in Acute Inflammation
  • 43. Jens Martensson 43 Leukocyte Recruitment to Sites of Inflammation
  • 44. Jens Martensson 44 Leukocyte Adhesion and Migration
  • 45. Jens Martensson After exiting the circulation, leukocytes move in the tissues toward the site of injury by a process called chemotaxis, which is defined as locomotion along a chemical gradient. 45 Chemotaxis of Leukocytes
  • 46. Jens Martensson 46 Phagocytosis and Clearance of the Offending Agents
  • 47. Jens Martensson Vasoactive Amines - Histamine - Serotonin Arachidonic Acid Metabolites - Prostaglandins 47 Mediators of inflammation
  • 48. Jens Martensson Cytokines - proteins produced principally by activated lymphocytes and macrophages - modulate the function of other cell types - Other Cytokines in Acute Inflammation : IL-6 and IL-7 Chemokines - cytokines that also stimulate leukocyte movement (chemotaxis) - classified into four major classes: CXC chemokines, CC chemokines, C chemokines and CX3C chemokine is fractalkine 48 Cytokines and Chemokines
  • 50. Jens Martensson • Platelet-Activating Factor • Product of Coagulation • Kinins • Neuropeptides 50 OTHER MEDIATORS OF INFLAMMATION
  • 51. Jens Martensson • Serous Inflammation • Fibrinous Inflammation • Purulent (Suppurative) Inflammation and Abscess • Ulcers 51 MORPHOLOGIC PATTERN OF ACUTE INFLAMMATION
  • 52. Jens Martensson MORPHOLOGIC FEATURES • Infiltration with mononuclear inflammatory cells, including macrophages, lymphocytes, and plasma cells • Tissue destruction, induced by persistent injury and/or inflammation • Attempts at healing by connective tissue replacement, accomplished by vascular proliferation (angiogenesis) and fibrosis 52 CHRONIC INFLAMMATION
  • 53. Jens Martensson Cells and Mediators in Chronic Inflammation: • Macrophages • Lymphocytes • Eosinophils • Mast cells 53 CHRONIC INFLAMMATION
  • 55. Jens Martensson Systemic Effects of Inflammation These represent responses to cytokines produced either by bacterial products or by other inflammatory stimuli. The acute phase response consists of several clinical and pathologic changes: • Fever • Acute Phase Proteins • Leukocytosis • Sepsis 55 SYSTEMIC EFFECT OF INFLAMMATION
  • 56. Jens Martensson OVERVIEW OF TISSUE REPAIR regeneration can occur through the proliferation of adjacent surviving cells or through the activity of tissue stem cells. In most cases healing is some combination of regeneration and scar; the outcome will be affected by (1) proliferative capacity of the damaged tissue, (2) integrity of the ECM, and (3) the chronicity of the associated inflammation. 56 TISSUE REPAIR
  • 57. Jens Martensson 57 Liver Regeneration Through Hepatocyte Proliferation
  • 58. Jens Martensson STEPS IN REPAIR BY SCAR FORMATION 58 REPAIR BY CONNECTIVE TISSUE DEPOSITION
  • 59. Jens Martensson Angiogenesis is the process of new blood vessel growth from existing vessels. • Vasodilation in response to NO and increased permeability in response to VEGF • Separation of pericytes from the vessel wall and basement membrane breakdown allowing vessel sprouting • Migration of endothelial cells toward the area of tissue injury • Proliferation of endothelial cells • Remodeling into capillary tubes • Recruitment of periendothelial cells • Suppression of endothelial proliferation and migration, and • redeposition of the basement membrane 59 ANGIOGENESIS
  • 60. Jens Martensson • Nutritional status of the host. • Metabolic status • Circulatory status or vascular adequacy. • Hormones • Size and location: Well-vascularized tissues heal faster; Inflammation in tissue spaces develops exudates that can either resolve or undergo organization. • Type of tissue: Labile and stable tissues have better tissue regeneration, whereas permanent tissues form only scar. • Local factors that delay healing include infections, ischemia, • mechanical forces, and foreign bodies. 60 FACTORS THAT INFLUENCE TISSUE REPAIR
  • 61. Jens Martensson • Deficient Scar Formation • Excessive Repair • Formation of Contractures 61 ABNORMALITIES IN TISSUE REPAIR