Tallk presented as part of the I International Symposium on Network Science and IV Seminar on Big Data at Brazil. November 7th, 2017

1. Genomics Big Data: the need for Public-
Private Partnership and innovative Cloud-
based solutions
Rodrigo Jardim
Alberto M. R. Dávila
Computational and Systems Biology Laboratory, Instituto
Oswaldo Cruz, FIOCRUZ
amrdavila

2. http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002195

3. “...genomics is either on par with
or the most demanding of the Big
Data domains...”

4. http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002195

5. http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002195

6. https://www.illumina.com/systems/sequencing-platforms/novaseq/specifications.html

7. How many centers in Brazil
should have the capacity to assist
with Genomics Big Data?

8. Should we build infra-structure for
that in every big Brazilian center?

9. To “cloudify” or not to “cloudify”…
that is the question ...

10. https://www.sherweb.com/blog/aws-azure-google-cloud-pricing-comparison/

11. https://cloudspectator.com/2017-cloud-services-comparison/
Cloud pricing comparison of public cloud providers with data centers in North America

12. http://www.businessinsider.com/amazons-cloud-business-hits-over-12-billion-in-revenue-2017-2

13. https://www.forbes.com/sites/louiscolumbus/2017/04/29/roundup-of-cloud-computing-forecasts-2017/#7f9e4bb031e8

14. https://www.cnbc.com/2017/07/26/amazon-sees-grail-as-a-special-opportunity-for-its-cloud-business.html

15. 1 human genome = 3.2 Gb (1X)
100 million human genomes = 320 Pb (1X)
https://www.cnbc.com/2017/07/26/amazon-sees-grail-as-a-special-opportunity-for-its-cloud-business.html

16. https://www.23andme.com/https://grail.com/
https://www.veritasgenetics.com/ https://www.humanlongevity.com/

17. Cloudifying...

18. Hybrid models as an
alternative

19. Few robust (blade-based) servers
+ cloud-enabled ones

20. Our road to Public-Private
Partnership for Research and
Training

21. https://bmcresnotes.biomedcentral.com/articles/10.1186/1756-0500-7-132

22. https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-017-1723-8

24. Galaxy is an open, web-based platform
for data intensive biomedical research
cloud
Galaxy : https://galaxyproject.org/

26. Stingray@Galaxy
Server

PBS/Torque

MPI

Hadoop

FTP
Stingray@Galaxy Nodes
C
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28. https://www.linkedin.com/feed/update/urn:li:activity:6327119656939192320

29. Acknowledgements