Personal Information
Organization / Workplace
Brisbane Australia
Industry
Medical / Health Care / Pharmaceuticals
Website
beatsonlab.com
About
I develop solutions to challenging problems with a focus on research science. I consider myself as a (Bio)DevOp.
I am a core developer of computational pipelines and data management procedures for next generation sequencing data in the context of high performance computing (HPC) environments.
I am a system administrator of linux servers and OS X desktops. I automate my work using tools such as Ansible and Fabric.
Specialties: Big data science. Work flow optimisation. Next generation sequencing. HPC. System administration. Mathematical optimisation. Python (NumPy, SciPy, MatplotLib, Fabric, Sphinx, Biopython). RethinkDB. Splunk. Ansible.
Tags
bioinformatics
science
software engineering
good practice
python programming
devops
biodevops
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