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AT QPS WE BELIEVE IN DEVELOPING CLOSE AND
LONG-LASTING RELATIONSHIPS WITH OUR CLIENTS ON THE
BASIS OF TRUST AND MUTUAL RESPECT. This mutual
trust, combined with the nimble approach we offer as a specialty
CRO, helps improve the quality of your outsourced clinical work
and reduces the degree of required oversight.
TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT.
CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY!
CALL +1 512 350 2827 EMAIL infobd@qps.com
RNAi Therapeutics
QPS White Paper
TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT.
CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY!
CALL +1 512 350 2827 | EMAIL infobd@qps.com
The Birth of RNAi
The Nobel Prize for the discovery that double-stranded RNAs (dsRNAs) can trigger silencing of complementary
messenger RNA sequences was awarded in 1998, and the term ‘RNA interference’ (RNAi) was born. This discovery
opened the door to a completely novel and untapped market within the pharmaceutical industry.
FLEXIBILITY. AGILITY. SPEED.
Shortly thereafter, short dsRNAs — or short
interfering RNAs (siRNAs) — were generated
artificially and used to demonstrate that this
process also occurs in mammalian cells. The
knowledge that small strands of RNAs can
affect gene expression has had a tremendous
impact on basic and applied research, and RNAi
is currently one of the most promising new
approaches for disease therapy.
In 2004, only six years after the discovery of
RNAi, the first siRNA-based human therapeutics
— developed to treat wet age-related macular
degeneration — entered phase I clinical trials.
RNAi is one of the fastest advancing fields in
biology, and the flow of discovery gives true
meaning to the expression ‘from the bench to
the bedside’.
TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT.
CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY!
CALL +1 512 350 2827 | EMAIL infobd@qps.com
FLEXIBILITY. AGILITY. SPEED.
Drug Candidate Company Pharmacological Activity Indication Phase of Development
Sirna-027 Sirna Therapeutics/Allergan Downregulation of VEGFR1
expression
Wet Age-Related Macular
Degenerationt
I
ALN-VSP Alnylam Pharmaceuticals Downregulation of kinesin
spindle protein (KSP) and
VEGF expression
Liver Cancers
ALN-TTR01 Alnylam Pharmaceuticals Downregulation of
Transthyretin (TTR)
expression
Transthyretin (TTR) Mediated
Amyloidosis
I
ISIS-CRPRx ISIS Pharmaceuticals Downregulation of CRP
expression
Cardiovascular Disease I
ISIS-APOCIIIRx ISIS Pharmaceuticals Downregulation of APOCIII
expression
Cardiovascular Disease I
ISIS-FXIRx ISIS Pharmaceuticals Downregulation of Factor XI
expression
Cardiovascular Disease I
ISIS-SGLT2Rx ISIS Pharmaceuticals Downregulation of SGLT2
expression
Diabetes I
TD101 TransDerm Downregulation keratin
6a (K6a) N171K mutant
expression
Pachyonychia Congenita I
pbi-shSTMN1 LP Gradalis Downregulation of
stathmin-1 expression
Solid Tumours I
EZN-2968 Santaris Pharma / Enzon
Pharmaceuticals
Downregulation
of HIF-1 expression
Solid Tumours I
EZN-3042 Santaris Pharma / Enzon
Pharmaceuticals
Downregulation
of survivin expression
Cancer I
CALAA-01 Calando Pharmaceuticals Downregulation of RRM2 Solid Tumours I
ALN-RSV01 Alnylam Pharmaceuticals Downregulation of
Respiratory Syncytial Virus’s
Nucleocapsid ‘N’ expression
Respiratory Syncytial Virus
Infection
II
PF-655 Quark Pharmaceuticals /
Pfizer
Downregulation of RTP801
expression.
Diabetic Macular Edema;
Wet Age-Related Macular
Degeneration
II
QPI-1002 Quark
Pharmaceuticals / Novartis
Downregulation of protein
p53 expression
Acute Kidney Injury II
Miravirsen Santaris Pharma Downregulation
of miR-122 expression
Hepatitis C II
Mipomersen ISIS Pharmaceuticals Downregulation of apoB-100
expression
Homozygous Familial
Hypercholesterolemia
III
Bevasiranib OPKO Health Downregulation of VEGF
expression
Wet Age-Related Macular
Degeneration
III
Current siRNA-Targeting Strategies
For new technology, siRNAs have moved into the clinic at an unprecedented pace. Some examples of the
diseases and siRNA-targeting strategies currently under investigation are described below.
TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT.
CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY!
CALL +1 512 350 2827 | EMAIL infobd@qps.com
New Ideas for RNAi Therapeutics
Although there are still challenges, real strides
towards realizing RNAi therapeutics for a wide
range of diseases have been made. There are a host
of reasons for optimism about the future of RNAi
therapeutics and much has been accomplished in
the race to bring this new treatment modality to the
clinic. Ultimately, successful RNAi-based therapies
for life-threatening or debilitating diseases will
require the use of targeted delivery strategies that
permit systemic delivery. Widespread interest in
this phenomenon ensures that we will soon witness
fast advances and new applications for RNAi-based
therapies. Given the way RNAi has transformed basic
research, and the speed with which it has reached
the clinic, the coming years promise to be exciting.
Ideas with world-changing potential might not be
easy to realize, but people do it every day.
FLEXIBILITY. AGILITY. SPEED.
Challenges
Although much is known about the mechanisms of
RNAi, applications of this gene-silencing technology
need to overcome a number of challenges. For
one, RNAi is a fundamentally important regulatory
mechanism in the cell, and tapping into it in the
interests of therapeutic benefit could result in
specific off-target effects. In addition, some synthetic
siRNAs can induce general pro-inflammatory off-
target effects.
Successful cell-specific delivery in vivo is clearly a
crucial challenge for achieving the desired RNAi
effect in clinical development. As with any other
pharmacological treatment modality, therapeutic
applications of siRNAs also require effective delivery
to target cells and tissues. Most of the pending
therapeutic applications based on RNAi rely on
direct introduction of synthetic siRNAs to increase
cellular uptake. The two main strategies are:
delivery of chemically synthesized siRNAs (non-viral
delivery), and delivery of shRNA-encoding genes
by engineered viruses that will ultimately generate
siRNAs by transcription within the target cells (viral
delivery).
Until recently, most approaches to in vivo delivery
have targeted local sites, such as the eye or lungs.
Recent progress in the delivery of synthetic siRNAs
to specific cell types in vivo strongly suggests that
RNAi could potentially be used in the systemic
treatment of a variety of diseases, including
cancer, viral infections, autoimmune diseases, and
neurodegenerative diseases.
TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT.
CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY!
CALL +1 512 350 2827 | EMAIL infobd@qps.com
QPS is Committed to Working
with You
QPS has extensive experience supporting RNAi
therapeutic product development, and we truly
understand its complexities, in particular to the
development of new (imaging) methods, such
as quantitative whole-body autoradiography
(QWBA) and microautoradiography (MARG)
to monitor the in vivo biodistribution of
siRNAs at the organ, tissue, and cellular level.
In combination with rt-PCR, the up or down
regulation of specific genes can be monitored
at the tissue level. Furthermore, this can be
coupled to PK sample analysis via hybridization-
ELISA or LC-MS/MS for PK/PD correlation. We are
committed to working with you to advance your
RNAi product portfolio in this rapidly developing
market segment, for the benefit of patients
worldwide.
Broad Strategic Access
QPS provides clients with broad strategic access
to its nonclinical and clinical development
capabilities, as well as its experience in
conducting nonclinical and clinical development
of a diverse portfolio of siRNAs across various
therapeutic areas. Our preferred vendor
agreements also provide for the establishment of
a client-dedicated unit within our organization.
Timely Delivery
Partnering with QPS will position you to succeed
in the timely delivery of your RNAi products to
the marketplace.
FLEXIBILITY. AGILITY. SPEED.
References
[1] First-in-human Mutation-targeted siRNA Phase Ib Trial of an Inherited Skin Disorder www.moleculartherapy.org 2010; 18: 442–446.
[2] The promises and pitfalls of RNA-interference-based therapeutics Nature 2009; 457: 426–433.
[3] Utilizing RNA interference to enhance cancer drug discovery Nature Reviews Drug Discovery 2007; 6: 556-568.
[4] Exploring the Uses of RNAi — Gene Knockdown and the Nobel Prize N Engl J Med 2006; 355:2391-2393.

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RNAi Therapeutics

  • 1. AT QPS WE BELIEVE IN DEVELOPING CLOSE AND LONG-LASTING RELATIONSHIPS WITH OUR CLIENTS ON THE BASIS OF TRUST AND MUTUAL RESPECT. This mutual trust, combined with the nimble approach we offer as a specialty CRO, helps improve the quality of your outsourced clinical work and reduces the degree of required oversight. TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT. CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY! CALL +1 512 350 2827 EMAIL infobd@qps.com RNAi Therapeutics QPS White Paper
  • 2. TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT. CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY! CALL +1 512 350 2827 | EMAIL infobd@qps.com The Birth of RNAi The Nobel Prize for the discovery that double-stranded RNAs (dsRNAs) can trigger silencing of complementary messenger RNA sequences was awarded in 1998, and the term ‘RNA interference’ (RNAi) was born. This discovery opened the door to a completely novel and untapped market within the pharmaceutical industry. FLEXIBILITY. AGILITY. SPEED. Shortly thereafter, short dsRNAs — or short interfering RNAs (siRNAs) — were generated artificially and used to demonstrate that this process also occurs in mammalian cells. The knowledge that small strands of RNAs can affect gene expression has had a tremendous impact on basic and applied research, and RNAi is currently one of the most promising new approaches for disease therapy. In 2004, only six years after the discovery of RNAi, the first siRNA-based human therapeutics — developed to treat wet age-related macular degeneration — entered phase I clinical trials. RNAi is one of the fastest advancing fields in biology, and the flow of discovery gives true meaning to the expression ‘from the bench to the bedside’.
  • 3. TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT. CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY! CALL +1 512 350 2827 | EMAIL infobd@qps.com FLEXIBILITY. AGILITY. SPEED. Drug Candidate Company Pharmacological Activity Indication Phase of Development Sirna-027 Sirna Therapeutics/Allergan Downregulation of VEGFR1 expression Wet Age-Related Macular Degenerationt I ALN-VSP Alnylam Pharmaceuticals Downregulation of kinesin spindle protein (KSP) and VEGF expression Liver Cancers ALN-TTR01 Alnylam Pharmaceuticals Downregulation of Transthyretin (TTR) expression Transthyretin (TTR) Mediated Amyloidosis I ISIS-CRPRx ISIS Pharmaceuticals Downregulation of CRP expression Cardiovascular Disease I ISIS-APOCIIIRx ISIS Pharmaceuticals Downregulation of APOCIII expression Cardiovascular Disease I ISIS-FXIRx ISIS Pharmaceuticals Downregulation of Factor XI expression Cardiovascular Disease I ISIS-SGLT2Rx ISIS Pharmaceuticals Downregulation of SGLT2 expression Diabetes I TD101 TransDerm Downregulation keratin 6a (K6a) N171K mutant expression Pachyonychia Congenita I pbi-shSTMN1 LP Gradalis Downregulation of stathmin-1 expression Solid Tumours I EZN-2968 Santaris Pharma / Enzon Pharmaceuticals Downregulation of HIF-1 expression Solid Tumours I EZN-3042 Santaris Pharma / Enzon Pharmaceuticals Downregulation of survivin expression Cancer I CALAA-01 Calando Pharmaceuticals Downregulation of RRM2 Solid Tumours I ALN-RSV01 Alnylam Pharmaceuticals Downregulation of Respiratory Syncytial Virus’s Nucleocapsid ‘N’ expression Respiratory Syncytial Virus Infection II PF-655 Quark Pharmaceuticals / Pfizer Downregulation of RTP801 expression. Diabetic Macular Edema; Wet Age-Related Macular Degeneration II QPI-1002 Quark Pharmaceuticals / Novartis Downregulation of protein p53 expression Acute Kidney Injury II Miravirsen Santaris Pharma Downregulation of miR-122 expression Hepatitis C II Mipomersen ISIS Pharmaceuticals Downregulation of apoB-100 expression Homozygous Familial Hypercholesterolemia III Bevasiranib OPKO Health Downregulation of VEGF expression Wet Age-Related Macular Degeneration III Current siRNA-Targeting Strategies For new technology, siRNAs have moved into the clinic at an unprecedented pace. Some examples of the diseases and siRNA-targeting strategies currently under investigation are described below.
  • 4. TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT. CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY! CALL +1 512 350 2827 | EMAIL infobd@qps.com New Ideas for RNAi Therapeutics Although there are still challenges, real strides towards realizing RNAi therapeutics for a wide range of diseases have been made. There are a host of reasons for optimism about the future of RNAi therapeutics and much has been accomplished in the race to bring this new treatment modality to the clinic. Ultimately, successful RNAi-based therapies for life-threatening or debilitating diseases will require the use of targeted delivery strategies that permit systemic delivery. Widespread interest in this phenomenon ensures that we will soon witness fast advances and new applications for RNAi-based therapies. Given the way RNAi has transformed basic research, and the speed with which it has reached the clinic, the coming years promise to be exciting. Ideas with world-changing potential might not be easy to realize, but people do it every day. FLEXIBILITY. AGILITY. SPEED. Challenges Although much is known about the mechanisms of RNAi, applications of this gene-silencing technology need to overcome a number of challenges. For one, RNAi is a fundamentally important regulatory mechanism in the cell, and tapping into it in the interests of therapeutic benefit could result in specific off-target effects. In addition, some synthetic siRNAs can induce general pro-inflammatory off- target effects. Successful cell-specific delivery in vivo is clearly a crucial challenge for achieving the desired RNAi effect in clinical development. As with any other pharmacological treatment modality, therapeutic applications of siRNAs also require effective delivery to target cells and tissues. Most of the pending therapeutic applications based on RNAi rely on direct introduction of synthetic siRNAs to increase cellular uptake. The two main strategies are: delivery of chemically synthesized siRNAs (non-viral delivery), and delivery of shRNA-encoding genes by engineered viruses that will ultimately generate siRNAs by transcription within the target cells (viral delivery). Until recently, most approaches to in vivo delivery have targeted local sites, such as the eye or lungs. Recent progress in the delivery of synthetic siRNAs to specific cell types in vivo strongly suggests that RNAi could potentially be used in the systemic treatment of a variety of diseases, including cancer, viral infections, autoimmune diseases, and neurodegenerative diseases.
  • 5. TIME IS OF THE ESSENCE IN DRUG DEVELOPMENT. CONTACT THE QPS BUSINESS DEVELOPMENT TEAM TODAY! CALL +1 512 350 2827 | EMAIL infobd@qps.com QPS is Committed to Working with You QPS has extensive experience supporting RNAi therapeutic product development, and we truly understand its complexities, in particular to the development of new (imaging) methods, such as quantitative whole-body autoradiography (QWBA) and microautoradiography (MARG) to monitor the in vivo biodistribution of siRNAs at the organ, tissue, and cellular level. In combination with rt-PCR, the up or down regulation of specific genes can be monitored at the tissue level. Furthermore, this can be coupled to PK sample analysis via hybridization- ELISA or LC-MS/MS for PK/PD correlation. We are committed to working with you to advance your RNAi product portfolio in this rapidly developing market segment, for the benefit of patients worldwide. Broad Strategic Access QPS provides clients with broad strategic access to its nonclinical and clinical development capabilities, as well as its experience in conducting nonclinical and clinical development of a diverse portfolio of siRNAs across various therapeutic areas. Our preferred vendor agreements also provide for the establishment of a client-dedicated unit within our organization. Timely Delivery Partnering with QPS will position you to succeed in the timely delivery of your RNAi products to the marketplace. FLEXIBILITY. AGILITY. SPEED. References [1] First-in-human Mutation-targeted siRNA Phase Ib Trial of an Inherited Skin Disorder www.moleculartherapy.org 2010; 18: 442–446. [2] The promises and pitfalls of RNA-interference-based therapeutics Nature 2009; 457: 426–433. [3] Utilizing RNA interference to enhance cancer drug discovery Nature Reviews Drug Discovery 2007; 6: 556-568. [4] Exploring the Uses of RNAi — Gene Knockdown and the Nobel Prize N Engl J Med 2006; 355:2391-2393.