Sage Bionetworks - Intro for Open Source Pharma Workshop

859 views

Published on

Sage Bionetworks - Intro for Open Source Pharma Workshop

Published in: Health & Medicine
0 Comments
1 Like
Statistics
Notes
  • Be the first to comment

No Downloads
Views
Total views
859
On SlideShare
0
From Embeds
0
Number of Embeds
43
Actions
Shares
0
Downloads
3
Comments
0
Likes
1
Embeds 0
No embeds

No notes for slide

Sage Bionetworks - Intro for Open Source Pharma Workshop

  1. 1. http://sagebase.org
  2. 2. can we attract teams to predict odds of breast cancer relapse from existing public data?
  3. 3. code sharing a prerequisite. http://synapse.org
  4. 4. accuracy of model jumped three orders of magnitude in nine days.
  5. 5. 6 76% accurate.
  6. 6. 7 (already generating new incentives)
  7. 7. can we increase reuse and replication of the results?
  8. 8. 21 february 2013 17 april 2013 ongoing...
  9. 9. http://synapse.org
  10. 10. SHOW ME THE CODE!
  11. 11. ...
  12. 12. can we increase research outputs of “big science”?
  13. 13. http://synapse.org
  14. 14. 18NPG papers 68core projects 248researchers 28institutions 1070datasets 1723results TCGA Pan-Cancer Consortium
  15. 15. can we increase accuracy of “knowledge”?
  16. 16. CRC Subtyping Consortium
  17. 17. A B C D E F 1 2 3 4 5 6 groups datasets subtypes
  18. 18. A B C D E F 1 2 3 4 5 6 G ...
  19. 19. can we develop our own open data?
  20. 20. http://sagebridge.org

×