NLM Resources on Rare Diseases 2011

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  • DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • MeSH continued the work begun in 2010 of merging the list of rare disease terms maintained by the Office of Rare Diseases Research (ORDR) into the MeSH vocabulary. The rare disease terms that matched existing MeSH descriptors were merged with those MeSH descriptors. The remainder were introduced as Supplementary Concept Records (Class 3) in MeSH 2011. As with all SCRs, each of these rare disease SCR terms was mapped to ("Heading Mapped to") at least one current MeSH disease term to help searching and indexing. For example, Snyder Robinson Syndrome is a new disease SCR that is mapped to the MeSH descriptor Mental Retardation, X-Linked. Both of these terms will appear in a MEDLINE citation if the SCR is assigned by the indexer. Because rare diseases are defined as having a prevalence of fewer than 200,000 affected individuals in the United States they traditionally received less attention and are sometimes called orphan diseases. Having these terms available for indexing purposes will enhance a more precise retrieval of the rare disease articles and contribute to their identification. DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • DRAFT, 10/17/05
  • NLM Resources on Rare Diseases 2011

    1. 1. NLM Resources: Rare Diseases Terry Ahmed, MLS Public Services Division National Library of Medicine National Institutes of Health Health and Human Services
    2. 2. Outline <ul><ul><li>PubMed </li></ul></ul><ul><ul><li>Consumer Resources MedlinePlus Genetics Home Reference </li></ul></ul><ul><ul><li>DIRLINE </li></ul></ul><ul><ul><li>Other Databases and Resources </li></ul></ul><ul><ul><li>MeSH </li></ul></ul><ul><ul><li>Full text articles </li></ul></ul><ul><ul><li>Manuscripts (contact information) </li></ul></ul>
    3. 3. PubMed/MEDLINE <ul><li>Access to MEDLINE (NLM’s database of citations/abstracts medicine and preclinical sciences http://www.pubmed.gov </li></ul><ul><li>Links to full-text articles in PubMed Central </li></ul><ul><li>PubMed Central http://www.ncbi.nlm.nih.gov/pmc </li></ul><ul><li>Adds citations Tuesday through Saturday </li></ul><ul><li>In Process citations (provides record before item is indexed with MeSH) </li></ul><ul><li>Ahead of Print Citations (pubstatusaheadofprint) </li></ul><ul><li>MyNCBI (email updates, sharing collections, saving searches </li></ul>
    4. 4. PubMed/MEDLINE <ul><li>PubMed Tutorial – Interactive instruction tool </li></ul><ul><li> http://www.nlm.nih.gov/bsd/disted/pubmedtutorial </li></ul><ul><li>PubMed Training Manual http://www.nlm.nih.gov/pubs/manuals/pm_workbook.pdf </li></ul><ul><li>Distance Education Program Resources (great resource on training materials for PubMed…all online) </li></ul><ul><li>http://www.nlm.nih.gov/bsd/dist_edu.html </li></ul>
    5. 5. PubMed/MEDLINE (new) <ul><li>PubMed Mobile (Beta)http://www.ncbi.nlm.nih.gov/m/pubmed/ </li></ul>Provides a simplified, mobile-friendly Web interface to access PubMed. PubMed contains millions of article citations from thousands of biomedical journals. Many citations include abstracts.
    6. 6. Consumer Resources <ul><li>MedlinePlus Information about diseases, conditions, wellness issues, latest treatments, drugs or supplements, medical videos/ illustrations, medical literature, and clinical trials. http://www.medlineplus.gov/ </li></ul><ul><li>Genetics Home Reference Genetics Home Reference provides consumer-friendly information about the effects of genetic variations on human health. http://ghr.nlm.nih.gov/ </li></ul>
    7. 7. DIRLINE <ul><li>(Directory of Information Resources Online), an NLM® online database, contains contact and descriptive information about many US and international organizations, research projects and databases. http://dirline.nlm.nih.gov </li></ul><ul><li>Mobile Version http://toxnet.nlm.nih.gov/pda/dirline.htm </li></ul><ul><li>Health Hotlines Directory of organizations with toll-free telephone numbers, derived from DIRLINE, 9000 biomedical organizations and resources. http://www.nlm.nih.gov/mobile/ </li></ul>
    8. 8. Other Databases and Resources <ul><li>Entrez cross database search </li></ul><ul><li>http://www.ncbi.nlm.nih.gov/sites/gquery </li></ul><ul><li>Other NLM Databases </li></ul><ul><li>http://www.nlm.nih.gov/databases/ </li></ul><ul><li>Other Genetics Information Resources FAQ: </li></ul><ul><li>http://www.nlm.nih.gov/services/genetics_resources.html </li></ul>
    9. 9. <ul><li>Merging over 11,800 rare disease terms from Office of Rare Disease Research (ORDR) into MeSH vocabulary Each term mapped to at least one current MeSH disease term. [supplementary concept] [nm] </li></ul><ul><li>Example: kindler syndrome [nm] Technical Bulletin (for more information) http://www.nlm.nih.gov/pubs/techbull/nd10/nd10_mesh.html </li></ul>MeSH
    10. 10. Free Full Text Articles <ul><li>Free Biomedical Literature Resources </li></ul><ul><li>http://www.nlm.nih.gov/docline/freehealthlit.html </li></ul><ul><li>Finding Full Text articles: US and International Resources http://www.nlm.nih.gov/services/getting_fulltext_articles.html </li></ul>
    11. 11. PubMed Manuscripts <ul><li>Manuscript Submission Process http://publicaccess.nih.gov/index.htm </li></ul><ul><li>NIH Manuscript Submission Assistance for NIH Staff (NIH Library) [email_address] </li></ul><ul><li>NIH Manuscript Submission Help Desk [email_address] </li></ul>
    12. 12. <ul><li>[email_address] Slide Share: http://www.slideshare.net/terryahmed/rare-diseases-workshop-2011-7548464 </li></ul><ul><li>DON’T FORGET to START with your library </li></ul><ul><ul><li>http://nnlm.gov/ OR (1-800-338-7657) </li></ul></ul><ul><ul><li>http://www.nlm.nih.gov/pubs/factsheets/intlmedlars.html (International) </li></ul></ul><ul><li>You can contact us at: </li></ul><ul><ul><li>[email_address] </li></ul></ul><ul><ul><li>(888) FIND-NLM </li></ul></ul><ul><ul><li>Contact Us link is on most NLM pages </li></ul></ul>

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