Fabrizio_capstone

S
Anna Fabrizio 3/9/10 University of Washington School of Aquatic and Fisheries Sciences Chemotaxis and foraging behavior  in  Octopus rubescens
Octopus physiology   ,[object Object],[object Object],[object Object],[object Object],[object Object]
Octopus foraging behaviors ,[object Object],[object Object],[object Object],[object Object],(Forsythe and Hanlon, 1995) Web-over Web-over Web-over Web-over
Octopus chemotaxis ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Objective ,[object Object],[object Object]
Behavioral experiments Experimental tank set-up T-wall boxes barrier wall
Behavioral experiments
Results ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
What does this mean? ,[object Object],[object Object],[object Object]
Stressed out crabs ,[object Object],[object Object],[object Object],[object Object]
Prey analysis –  Hemigrapsus oregonensis  ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Procedure
Protein analysis ,[object Object],[object Object],C2  C3  C4  C5  C6  S1  S2  S3  S4  S5  S6
Results Genetic analysis ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Genetic analysis
[object Object],[object Object],Future possibilities
Acknowledgments Steven Roberts, Sam White,  Mackenzie Gavery Tim Carpenter, Kathryn Kegel - Roberts lab - Seattle Aquarium
1 of 17

Recommended

7 10. carlos p glo & sds, nano, biofueled by
7 10. carlos p glo & sds, nano, biofueled7 10. carlos p glo & sds, nano, biofueled
7 10. carlos p glo & sds, nano, biofueledCarlos Santos Perez
265 views2 slides
Neufeld citizen science by
Neufeld citizen scienceNeufeld citizen science
Neufeld citizen scienceJosh Neufeld
1.3K views18 slides
Heavy metal Accumulation by
Heavy metal AccumulationHeavy metal Accumulation
Heavy metal AccumulationUkwa Uche
199 views15 slides
Poster2 by
Poster2Poster2
Poster2Tess Dooley
57 views1 slide
Bacteria by
BacteriaBacteria
Bacteriakharatearun
481 views60 slides
lingebai_phdpresentation by
lingebai_phdpresentationlingebai_phdpresentation
lingebai_phdpresentationLinge Lass
170 views63 slides

More Related Content

Similar to Fabrizio_capstone

Emerging Diversity Within Well-known Heterotrophic Flagellates Groups Reveal... by
 Emerging Diversity Within Well-known Heterotrophic Flagellates Groups Reveal... Emerging Diversity Within Well-known Heterotrophic Flagellates Groups Reveal...
Emerging Diversity Within Well-known Heterotrophic Flagellates Groups Reveal...Javier del Campo
575 views10 slides
BI 461 lab experiment [Kodiak Hengstebeck] by
BI 461 lab experiment [Kodiak Hengstebeck]BI 461 lab experiment [Kodiak Hengstebeck]
BI 461 lab experiment [Kodiak Hengstebeck]Kodiak Hengstebeck
116 views13 slides
The predator deterrent effects of musk gland secretions from the common musk ... by
The predator deterrent effects of musk gland secretions from the common musk ...The predator deterrent effects of musk gland secretions from the common musk ...
The predator deterrent effects of musk gland secretions from the common musk ...neildazet
1.1K views21 slides
Student Research Poster - NK_CSK_v2 by
Student Research Poster - NK_CSK_v2Student Research Poster - NK_CSK_v2
Student Research Poster - NK_CSK_v2Natalie Kobayashi
183 views1 slide
tesi finale Giulio Scalzotto by
tesi finale Giulio Scalzottotesi finale Giulio Scalzotto
tesi finale Giulio ScalzottoGiulio Gaetano Scalzotto
719 views67 slides
Darcya_HonoursThesisFinal by
Darcya_HonoursThesisFinalDarcya_HonoursThesisFinal
Darcya_HonoursThesisFinalAndrew Darcy
107 views17 slides

Similar to Fabrizio_capstone(20)

Emerging Diversity Within Well-known Heterotrophic Flagellates Groups Reveal... by Javier del Campo
 Emerging Diversity Within Well-known Heterotrophic Flagellates Groups Reveal... Emerging Diversity Within Well-known Heterotrophic Flagellates Groups Reveal...
Emerging Diversity Within Well-known Heterotrophic Flagellates Groups Reveal...
Javier del Campo575 views
The predator deterrent effects of musk gland secretions from the common musk ... by neildazet
The predator deterrent effects of musk gland secretions from the common musk ...The predator deterrent effects of musk gland secretions from the common musk ...
The predator deterrent effects of musk gland secretions from the common musk ...
neildazet1.1K views
Darcya_HonoursThesisFinal by Andrew Darcy
Darcya_HonoursThesisFinalDarcya_HonoursThesisFinal
Darcya_HonoursThesisFinal
Andrew Darcy107 views
Presentation 1.ppt - OCPs by Ukwa Uche
Presentation 1.ppt - OCPsPresentation 1.ppt - OCPs
Presentation 1.ppt - OCPs
Ukwa Uche424 views
Deoxyribonucleic Acid, Or Dna Is A Genetic Code That... by Jennifer Marie
Deoxyribonucleic Acid, Or Dna Is A Genetic Code That...Deoxyribonucleic Acid, Or Dna Is A Genetic Code That...
Deoxyribonucleic Acid, Or Dna Is A Genetic Code That...
Jennifer Marie5 views
EDSPwebinar 4: The amphibian metamorphosis assay by Jim Regan
EDSPwebinar 4: The amphibian metamorphosis assayEDSPwebinar 4: The amphibian metamorphosis assay
EDSPwebinar 4: The amphibian metamorphosis assay
Jim Regan2.3K views
Mt lasut 1996-tesis-aarhus univ-dk by Markus T Lasut
Mt lasut 1996-tesis-aarhus univ-dkMt lasut 1996-tesis-aarhus univ-dk
Mt lasut 1996-tesis-aarhus univ-dk
Markus T Lasut485 views
REVIEW THE STATUS OF GENOME ANALYSIS OF CULTURED ARCHAEA by Shruti Gupta
REVIEW THE STATUS OF GENOME ANALYSIS OF CULTURED ARCHAEA REVIEW THE STATUS OF GENOME ANALYSIS OF CULTURED ARCHAEA
REVIEW THE STATUS OF GENOME ANALYSIS OF CULTURED ARCHAEA
Shruti Gupta1.7K views
Shami office word document (2) by MOHTISHIM CH
Shami office word document (2)Shami office word document (2)
Shami office word document (2)
MOHTISHIM CH394 views
Diagnosis of fish diseases by Engy Tarek
Diagnosis of fish diseasesDiagnosis of fish diseases
Diagnosis of fish diseases
Engy Tarek14.7K views

More from sr320

Identifying Local Olympia Oyster Stocks Useful for Restoration by
Identifying Local Olympia Oyster Stocks Useful for RestorationIdentifying Local Olympia Oyster Stocks Useful for Restoration
Identifying Local Olympia Oyster Stocks Useful for Restorationsr320
1.5K views27 slides
Does DNA methylation facilitate phenotypic plasticity in marine invertebrates? by
Does DNA methylation facilitate phenotypic plasticity in marine invertebrates?Does DNA methylation facilitate phenotypic plasticity in marine invertebrates?
Does DNA methylation facilitate phenotypic plasticity in marine invertebrates?sr320
1.9K views62 slides
Science Communication and Impact: A Researcher's Perspective by
Science Communication and Impact: A Researcher's PerspectiveScience Communication and Impact: A Researcher's Perspective
Science Communication and Impact: A Researcher's Perspectivesr320
955 views24 slides
Genomic approaches to assessing ecosystem health by
Genomic approaches to assessing ecosystem healthGenomic approaches to assessing ecosystem health
Genomic approaches to assessing ecosystem healthsr320
717 views27 slides
Collaborative Genomic Data Analyses in the Cloud by
Collaborative Genomic Data Analyses in the CloudCollaborative Genomic Data Analyses in the Cloud
Collaborative Genomic Data Analyses in the Cloudsr320
634 views24 slides
Genomics on the Half Shell: Making Science more Open by
Genomics on the Half Shell: Making Science more OpenGenomics on the Half Shell: Making Science more Open
Genomics on the Half Shell: Making Science more Opensr320
1K views81 slides

More from sr320(20)

Identifying Local Olympia Oyster Stocks Useful for Restoration by sr320
Identifying Local Olympia Oyster Stocks Useful for RestorationIdentifying Local Olympia Oyster Stocks Useful for Restoration
Identifying Local Olympia Oyster Stocks Useful for Restoration
sr3201.5K views
Does DNA methylation facilitate phenotypic plasticity in marine invertebrates? by sr320
Does DNA methylation facilitate phenotypic plasticity in marine invertebrates?Does DNA methylation facilitate phenotypic plasticity in marine invertebrates?
Does DNA methylation facilitate phenotypic plasticity in marine invertebrates?
sr3201.9K views
Science Communication and Impact: A Researcher's Perspective by sr320
Science Communication and Impact: A Researcher's PerspectiveScience Communication and Impact: A Researcher's Perspective
Science Communication and Impact: A Researcher's Perspective
sr320955 views
Genomic approaches to assessing ecosystem health by sr320
Genomic approaches to assessing ecosystem healthGenomic approaches to assessing ecosystem health
Genomic approaches to assessing ecosystem health
sr320717 views
Collaborative Genomic Data Analyses in the Cloud by sr320
Collaborative Genomic Data Analyses in the CloudCollaborative Genomic Data Analyses in the Cloud
Collaborative Genomic Data Analyses in the Cloud
sr320634 views
Genomics on the Half Shell: Making Science more Open by sr320
Genomics on the Half Shell: Making Science more OpenGenomics on the Half Shell: Making Science more Open
Genomics on the Half Shell: Making Science more Open
sr3201K views
Epigenetic and Environmental Influences on the Shellfish Immune Response by sr320
Epigenetic and Environmental Influences on the Shellfish Immune ResponseEpigenetic and Environmental Influences on the Shellfish Immune Response
Epigenetic and Environmental Influences on the Shellfish Immune Response
sr3202.3K views
NSA2012 Short reads and Oyster Genome Resources by sr320
NSA2012 Short reads and Oyster Genome ResourcesNSA2012 Short reads and Oyster Genome Resources
NSA2012 Short reads and Oyster Genome Resources
sr3202.1K views
Short read sequencing and shellfish by sr320
Short read sequencing and shellfishShort read sequencing and shellfish
Short read sequencing and shellfish
sr320529 views
FISH441: Oysters, acidification and methylation by sr320
FISH441: Oysters, acidification and methylationFISH441: Oysters, acidification and methylation
FISH441: Oysters, acidification and methylation
sr320637 views
FISH441: Oyster acidification: gene and protein expression by sr320
FISH441: Oyster acidification: gene and protein expression FISH441: Oyster acidification: gene and protein expression
FISH441: Oyster acidification: gene and protein expression
sr3203K views
FISH441: Oyster Hypoxia and acclimation by sr320
FISH441: Oyster Hypoxia and acclimationFISH441: Oyster Hypoxia and acclimation
FISH441: Oyster Hypoxia and acclimation
sr320530 views
Timmins Schiffman PCSGA 2011 by sr320
Timmins Schiffman PCSGA 2011Timmins Schiffman PCSGA 2011
Timmins Schiffman PCSGA 2011
sr320515 views
Elene Dorfmeier pcsga11 by sr320
Elene Dorfmeier pcsga11 Elene Dorfmeier pcsga11
Elene Dorfmeier pcsga11
sr320545 views
FISH510 Lec 1 by sr320
FISH510 Lec 1FISH510 Lec 1
FISH510 Lec 1
sr320512 views
FISH441 Group Project (Oysters) by sr320
FISH441 Group Project (Oysters)FISH441 Group Project (Oysters)
FISH441 Group Project (Oysters)
sr320346 views
Timmins-Schiffman P2010 by sr320
Timmins-Schiffman P2010Timmins-Schiffman P2010
Timmins-Schiffman P2010
sr320492 views
Gavery PCSGA 2010 by sr320
Gavery PCSGA 2010Gavery PCSGA 2010
Gavery PCSGA 2010
sr320687 views
Salmon Senescence by sr320
Salmon SenescenceSalmon Senescence
Salmon Senescence
sr3201.7K views
Roberts GRC by sr320
Roberts GRCRoberts GRC
Roberts GRC
sr320615 views

Recently uploaded

Elevating Privacy and Security in CloudStack - Boris Stoyanov - ShapeBlue by
Elevating Privacy and Security in CloudStack - Boris Stoyanov - ShapeBlueElevating Privacy and Security in CloudStack - Boris Stoyanov - ShapeBlue
Elevating Privacy and Security in CloudStack - Boris Stoyanov - ShapeBlueShapeBlue
96 views7 slides
Hypervisor Agnostic DRS in CloudStack - Brief overview & demo - Vishesh Jinda... by
Hypervisor Agnostic DRS in CloudStack - Brief overview & demo - Vishesh Jinda...Hypervisor Agnostic DRS in CloudStack - Brief overview & demo - Vishesh Jinda...
Hypervisor Agnostic DRS in CloudStack - Brief overview & demo - Vishesh Jinda...ShapeBlue
63 views13 slides
NTGapps NTG LowCode Platform by
NTGapps NTG LowCode Platform NTGapps NTG LowCode Platform
NTGapps NTG LowCode Platform Mustafa Kuğu
141 views30 slides
iSAQB Software Architecture Gathering 2023: How Process Orchestration Increas... by
iSAQB Software Architecture Gathering 2023: How Process Orchestration Increas...iSAQB Software Architecture Gathering 2023: How Process Orchestration Increas...
iSAQB Software Architecture Gathering 2023: How Process Orchestration Increas...Bernd Ruecker
50 views69 slides
Network Source of Truth and Infrastructure as Code revisited by
Network Source of Truth and Infrastructure as Code revisitedNetwork Source of Truth and Infrastructure as Code revisited
Network Source of Truth and Infrastructure as Code revisitedNetwork Automation Forum
42 views45 slides
TrustArc Webinar - Managing Online Tracking Technology Vendors_ A Checklist f... by
TrustArc Webinar - Managing Online Tracking Technology Vendors_ A Checklist f...TrustArc Webinar - Managing Online Tracking Technology Vendors_ A Checklist f...
TrustArc Webinar - Managing Online Tracking Technology Vendors_ A Checklist f...TrustArc
77 views29 slides

Recently uploaded(20)

Elevating Privacy and Security in CloudStack - Boris Stoyanov - ShapeBlue by ShapeBlue
Elevating Privacy and Security in CloudStack - Boris Stoyanov - ShapeBlueElevating Privacy and Security in CloudStack - Boris Stoyanov - ShapeBlue
Elevating Privacy and Security in CloudStack - Boris Stoyanov - ShapeBlue
ShapeBlue96 views
Hypervisor Agnostic DRS in CloudStack - Brief overview & demo - Vishesh Jinda... by ShapeBlue
Hypervisor Agnostic DRS in CloudStack - Brief overview & demo - Vishesh Jinda...Hypervisor Agnostic DRS in CloudStack - Brief overview & demo - Vishesh Jinda...
Hypervisor Agnostic DRS in CloudStack - Brief overview & demo - Vishesh Jinda...
ShapeBlue63 views
NTGapps NTG LowCode Platform by Mustafa Kuğu
NTGapps NTG LowCode Platform NTGapps NTG LowCode Platform
NTGapps NTG LowCode Platform
Mustafa Kuğu141 views
iSAQB Software Architecture Gathering 2023: How Process Orchestration Increas... by Bernd Ruecker
iSAQB Software Architecture Gathering 2023: How Process Orchestration Increas...iSAQB Software Architecture Gathering 2023: How Process Orchestration Increas...
iSAQB Software Architecture Gathering 2023: How Process Orchestration Increas...
Bernd Ruecker50 views
TrustArc Webinar - Managing Online Tracking Technology Vendors_ A Checklist f... by TrustArc
TrustArc Webinar - Managing Online Tracking Technology Vendors_ A Checklist f...TrustArc Webinar - Managing Online Tracking Technology Vendors_ A Checklist f...
TrustArc Webinar - Managing Online Tracking Technology Vendors_ A Checklist f...
TrustArc77 views
Keynote Talk: Open Source is Not Dead - Charles Schulz - Vates by ShapeBlue
Keynote Talk: Open Source is Not Dead - Charles Schulz - VatesKeynote Talk: Open Source is Not Dead - Charles Schulz - Vates
Keynote Talk: Open Source is Not Dead - Charles Schulz - Vates
ShapeBlue119 views
Why and How CloudStack at weSystems - Stephan Bienek - weSystems by ShapeBlue
Why and How CloudStack at weSystems - Stephan Bienek - weSystemsWhy and How CloudStack at weSystems - Stephan Bienek - weSystems
Why and How CloudStack at weSystems - Stephan Bienek - weSystems
ShapeBlue111 views
Business Analyst Series 2023 - Week 3 Session 5 by DianaGray10
Business Analyst Series 2023 -  Week 3 Session 5Business Analyst Series 2023 -  Week 3 Session 5
Business Analyst Series 2023 - Week 3 Session 5
DianaGray10369 views
PharoJS - Zürich Smalltalk Group Meetup November 2023 by Noury Bouraqadi
PharoJS - Zürich Smalltalk Group Meetup November 2023PharoJS - Zürich Smalltalk Group Meetup November 2023
PharoJS - Zürich Smalltalk Group Meetup November 2023
Noury Bouraqadi141 views
Developments to CloudStack’s SDN ecosystem: Integration with VMWare NSX 4 - P... by ShapeBlue
Developments to CloudStack’s SDN ecosystem: Integration with VMWare NSX 4 - P...Developments to CloudStack’s SDN ecosystem: Integration with VMWare NSX 4 - P...
Developments to CloudStack’s SDN ecosystem: Integration with VMWare NSX 4 - P...
ShapeBlue82 views
2FA and OAuth2 in CloudStack - Andrija Panić - ShapeBlue by ShapeBlue
2FA and OAuth2 in CloudStack - Andrija Panić - ShapeBlue2FA and OAuth2 in CloudStack - Andrija Panić - ShapeBlue
2FA and OAuth2 in CloudStack - Andrija Panić - ShapeBlue
ShapeBlue50 views
Igniting Next Level Productivity with AI-Infused Data Integration Workflows by Safe Software
Igniting Next Level Productivity with AI-Infused Data Integration Workflows Igniting Next Level Productivity with AI-Infused Data Integration Workflows
Igniting Next Level Productivity with AI-Infused Data Integration Workflows
Safe Software344 views
Centralized Logging Feature in CloudStack using ELK and Grafana - Kiran Chava... by ShapeBlue
Centralized Logging Feature in CloudStack using ELK and Grafana - Kiran Chava...Centralized Logging Feature in CloudStack using ELK and Grafana - Kiran Chava...
Centralized Logging Feature in CloudStack using ELK and Grafana - Kiran Chava...
ShapeBlue48 views
Data Integrity for Banking and Financial Services by Precisely
Data Integrity for Banking and Financial ServicesData Integrity for Banking and Financial Services
Data Integrity for Banking and Financial Services
Precisely56 views
HTTP headers that make your website go faster - devs.gent November 2023 by Thijs Feryn
HTTP headers that make your website go faster - devs.gent November 2023HTTP headers that make your website go faster - devs.gent November 2023
HTTP headers that make your website go faster - devs.gent November 2023
Thijs Feryn28 views
Setting Up Your First CloudStack Environment with Beginners Challenges - MD R... by ShapeBlue
Setting Up Your First CloudStack Environment with Beginners Challenges - MD R...Setting Up Your First CloudStack Environment with Beginners Challenges - MD R...
Setting Up Your First CloudStack Environment with Beginners Challenges - MD R...
ShapeBlue54 views
CloudStack and GitOps at Enterprise Scale - Alex Dometrius, Rene Glover - AT&T by ShapeBlue
CloudStack and GitOps at Enterprise Scale - Alex Dometrius, Rene Glover - AT&TCloudStack and GitOps at Enterprise Scale - Alex Dometrius, Rene Glover - AT&T
CloudStack and GitOps at Enterprise Scale - Alex Dometrius, Rene Glover - AT&T
ShapeBlue56 views

Fabrizio_capstone

Editor's Notes

  1. Not primarily reliant on visual or chemotaxis Figure: study showing groping vs pounce (webover) hunting being dependent on the environment
  2. Chase and wells: chemicals being glutamic acid, AMP, and glycine Lee: chemicals being proline, ATP, and crab extract Problems with studies: Chase and Wells -> no specific direction set, used chemicals (not natural); Lee -> lab-reared animals that were selected for preferencing crab, used chemicals (not natural) My question: how would octopuses respond to a more natural trial of chemotaxis?
  3. - By using live crabs
  4. Explain tank and experimental set-up Essentially a Y-maze (no mixing between arms), 2 set-ups: blind and visual – blind trials = black plexi dividers so octopus couldn’t see the crab with opaque holed boxes for crabs with water flow through them, visual = clear plexi dividers with plexi boxes for crabs
  5. Used 2 octos: to try and reduce personality induced behavior Allowed for acclimation time, then removed grating and gave the octopus 40 min to make a choice A choice was made when the octopus’ head passed around the T structure into one arm of the maze Type of trial and the arm containing the prey were randomized to reduce learned behavior
  6. Behavior: color changes/responses to visual clues
  7. Mention briefly a little bit about the crab species: Green shore crab, local species, grows up to 5 cm, lives in tide pools, common SDS-PAGE for protein analysis, PCR for gene expression
  8. Salad spinner: 2.5 min Water bath for 1 hour Collect and freeze water samples After hour, immediately kill and remove gills Fixate one gill from each in Tri-Reagent for RNA isolation Fixate one gill from each in CelLytic to fixate protein
  9. Hemocyanin: used to carry oxygen (of course there’d be a TON in the gills) Arginine kinase: helps maintain ATP levels by the phosphorylation of "phosphagens"  which serves as a high energy source from which ATP can be replaced quickly, and can bind actin Superoxide dismustase: destroys radical oxidative species (in mitochondria), which can be excessively generated during times of stress Brachyurin: serine protease that degrades collagen Cuticle protein: from exoskeleton (contamination)