The 
known 
and 
the 
unknowns: 
A 
mul2pathogen 
survey 
to 
iden2fy 
diseases 
in 
ca;le 
herds 
in 
Tanzania 
Silvia 
Alonso*1, 
Phil 
Toye2, 
Joerg 
Jores2, 
James 
Wakhungu1, 
George 
Msalya3, 
Delia 
Grace1, 
Fred 
Unger1 
IntroducGon 
Livestock 
farmers 
in 
Africa 
are 
facing 
important 
challenges 
on 
animal 
health. 
DISEASES 
OF 
CATTLE 
ARE 
REPORTED 
BY 
FARMERS 
AS 
AN 
IMPORTANT 
FACTOR 
LIMITING 
PRODUCTIVITY 
AND 
INCOME 
GENERATION. 
• Limited 
capacity 
and 
infrastructure 
of 
government 
services 
for 
disease 
idenGficaGon 
and 
control. 
• Lack 
of 
systemaGc 
disease 
surveillance 
– 
Ad 
hoc 
surveys 
give 
biased 
picture 
on 
priority 
diseases. 
Materials 
and 
methods 
Project 
objecGves: 
(i) 
confirm 
presence 
of 
well-­‐known 
ca]le 
pathogens; 
(ii) 
invesGgate 
presence 
of 
other 
pathogens 
rarely 
looked 
for. 
Pictures 
Silvia 
Alonso 
s.alonso@cgiar.org 
● 
P.O. 
Box 
30709-­‐00100 
Nairobi 
Kenya 
● 
+254 
20 
422 
3465 
h]p://aghealth.wordpress.com 
● 
www.ilri.org 
Acknowledgements: 
The 
CGIAR 
Research 
Program 
on 
Agriculture 
for 
NutriGon 
and 
Health 
(A4NH) 
and 
the 
InternaGonal 
Livestock 
Research 
InsGtute 
(ILRI) 
Funding: 
Federal 
Ministry 
for 
Economic 
CooperaGon 
and 
Development 
(Germany) 
and 
the 
CGIAR 
Research 
Program 
on 
Agriculture 
for 
NutriGon 
and 
Health 
(A4NH) 
LAB 
SCREENING 
(ELISA) 
This 
document 
is 
licensed 
for 
use 
under 
a 
CreaGve 
Commons 
A]ribuGon 
–Non 
commercial-­‐Share 
Alike 
3.0 
Unported 
License 
September 
2014 
Results 
Research 
into 
use 
153 
ca]le 
farmers 
interviewed 
• Smallholder 
dairy 
farmer 
(intensive, 
few 
animals) 
• Pastoralists 
(extensive, 
large 
herds) 
400 
SICK 
ca]le: 
• Serum 
sample 
• Whole 
blood 
sample 
DISEASE 
PATHOGEN 
Q 
fever 
Coxiella 
burneF 
East 
Coast 
Fever 
Theileria 
parva 
Theileriosis 
T. 
mutans 
Anaplasmosis 
Anaplasma 
marginale 
Babesiosis 
Babesia 
bigemina 
Brucellosis 
Brucella 
spp 
Contagious 
Bov. 
Pleuropneumonia 
Mycoplasma 
mycoides 
Bovine 
Respiratory 
SyncyGal 
Virus 
BRSV 
Bovine 
Parainfluenza 
Virus 
Type 
3 
PIV3 
InfecGous 
Bovine 
RhinotracheiGs 
IBRV 
Bovine 
Virus 
Diarrhoea 
Virus 
BVDV 
Neospora 
Neospora 
caninum 
• Feedback 
to 
farmers 
– 
meeGngs 
at 
village/district 
level 
to 
(i) 
discuss 
findings, 
(ii) 
share 
knowledge 
on 
disease, 
(iii) 
discuss 
control 
opGons 
(e.g. 
treatments, 
vaccinaGon, 
biosecurity) 
• Feedback 
to 
Government 
Veterinary 
Services 
Photo 
credit: 
ILRI/Silvia 
Alonso 
Photo 
credit: 
ILRI/Silvia 
Alonso 
DISEASE 
PATHOGEN 
% 
POSITIVE 
(N 
total) 
% 
FARMERS 
REPORTING 
THIS 
DISEASE 
AS 
COMMON 
Q 
fever 
Coxiella 
burneF) 
11.2 
(392) 
(only 
1/153 
farmers 
reported 
knowing 
this 
disease) 
East 
Coast 
Fever 
(Theileria 
parva) 
31.8 
(402) 
37% 
Theileriasis 
(T. 
mutans) 
10.2 
(402) 
-­‐-­‐ 
Anaplasmosis 
(Anaplasma 
marginale) 
31.6 
(402) 
18% 
Babesiosis 
(Babesia 
bigemina) 
21.4 
(402) 
-­‐-­‐ 
Brucellosis 
(Brucella 
spp) 
11.4 
(403) 
0.7% 
Contagious 
Bovine 
Pleuropneumonia 
(CBPP 
– 
Mycoplasma) 
18.1 
(381) 
22% 
Bovine 
Respiratory 
Syncy2al 
Virus 
(BRSV) 
(lab 
work 
ongoing) 
Infec2ous 
Bovine 
Rhinotrachei2s 
(IBRV) 
(lab 
work 
ongoing) 
25% 
Bovine 
Parainfluenza 
Virus 
Type 
3 
(PIV3) 
(lab 
work 
ongoing) 
Bovine 
Virus 
Diarrhoea 
Virus 
(BVDV) 
(lab 
work 
ongoing) 
-­‐-­‐ 
Neospora 
(Neospora 
caninum) 
(lab 
work 
ongoing) 
-­‐-­‐ 
• Tick 
borne 
diseases 
quite 
widespread 
in 
the 
study 
areas 
• Preliminary 
results 
suggest 
discrepancies 
with 
farmers 
percepGon 
of 
disease 
relaGve 
importance 
• Se 
/ 
Sp 
of 
diagnosGcs 
not 
considered 
Table 
2. 
PRELIMINARY 
ELISA 
results 
and 
Top 
3 
diseases 
(highlighted) 
according 
to 
laboratory 
results 
and 
farmers 
percepGons. 
Table 
1. 
List 
of 
ca]le 
diseases 
included 
in 
the 
study 
Map 
of 
TANZANIA 
showing 
study 
sites: 
• Tanga 
region 
(Lushoto 
and 
Handeni 
Districts); 
• Morogoro 
region 
(Mvomero 
and 
Kilosa 
Districts) 
• Further 
lab 
work 
to 
be 
conducted 
• Understand 
IN 
THE 
disease 
pa]erns 
according 
to 
(i) 
geographical 
locaGon 
(ii) 
farming 
systems 
and 
(iii) 
farmers 
pracGces. 
PIPELINE 
1 
Integrated 
Science 
Dep. 
ILRI 
(Kenya); 
2 
Biosciences 
Department, 
ILRI 
(Kenya); 
3 
Dept 
of 
Animal 
Science 
and 
ProducUon, 
SUA 
(Tanzania) 
September 
2014

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The known and the unknowns: A multipathogen survey to identify diseases in cattle herds in Tanzania

  • 1. The known and the unknowns: A mul2pathogen survey to iden2fy diseases in ca;le herds in Tanzania Silvia Alonso*1, Phil Toye2, Joerg Jores2, James Wakhungu1, George Msalya3, Delia Grace1, Fred Unger1 IntroducGon Livestock farmers in Africa are facing important challenges on animal health. DISEASES OF CATTLE ARE REPORTED BY FARMERS AS AN IMPORTANT FACTOR LIMITING PRODUCTIVITY AND INCOME GENERATION. • Limited capacity and infrastructure of government services for disease idenGficaGon and control. • Lack of systemaGc disease surveillance – Ad hoc surveys give biased picture on priority diseases. Materials and methods Project objecGves: (i) confirm presence of well-­‐known ca]le pathogens; (ii) invesGgate presence of other pathogens rarely looked for. Pictures Silvia Alonso s.alonso@cgiar.org ● P.O. Box 30709-­‐00100 Nairobi Kenya ● +254 20 422 3465 h]p://aghealth.wordpress.com ● www.ilri.org Acknowledgements: The CGIAR Research Program on Agriculture for NutriGon and Health (A4NH) and the InternaGonal Livestock Research InsGtute (ILRI) Funding: Federal Ministry for Economic CooperaGon and Development (Germany) and the CGIAR Research Program on Agriculture for NutriGon and Health (A4NH) LAB SCREENING (ELISA) This document is licensed for use under a CreaGve Commons A]ribuGon –Non commercial-­‐Share Alike 3.0 Unported License September 2014 Results Research into use 153 ca]le farmers interviewed • Smallholder dairy farmer (intensive, few animals) • Pastoralists (extensive, large herds) 400 SICK ca]le: • Serum sample • Whole blood sample DISEASE PATHOGEN Q fever Coxiella burneF East Coast Fever Theileria parva Theileriosis T. mutans Anaplasmosis Anaplasma marginale Babesiosis Babesia bigemina Brucellosis Brucella spp Contagious Bov. Pleuropneumonia Mycoplasma mycoides Bovine Respiratory SyncyGal Virus BRSV Bovine Parainfluenza Virus Type 3 PIV3 InfecGous Bovine RhinotracheiGs IBRV Bovine Virus Diarrhoea Virus BVDV Neospora Neospora caninum • Feedback to farmers – meeGngs at village/district level to (i) discuss findings, (ii) share knowledge on disease, (iii) discuss control opGons (e.g. treatments, vaccinaGon, biosecurity) • Feedback to Government Veterinary Services Photo credit: ILRI/Silvia Alonso Photo credit: ILRI/Silvia Alonso DISEASE PATHOGEN % POSITIVE (N total) % FARMERS REPORTING THIS DISEASE AS COMMON Q fever Coxiella burneF) 11.2 (392) (only 1/153 farmers reported knowing this disease) East Coast Fever (Theileria parva) 31.8 (402) 37% Theileriasis (T. mutans) 10.2 (402) -­‐-­‐ Anaplasmosis (Anaplasma marginale) 31.6 (402) 18% Babesiosis (Babesia bigemina) 21.4 (402) -­‐-­‐ Brucellosis (Brucella spp) 11.4 (403) 0.7% Contagious Bovine Pleuropneumonia (CBPP – Mycoplasma) 18.1 (381) 22% Bovine Respiratory Syncy2al Virus (BRSV) (lab work ongoing) Infec2ous Bovine Rhinotrachei2s (IBRV) (lab work ongoing) 25% Bovine Parainfluenza Virus Type 3 (PIV3) (lab work ongoing) Bovine Virus Diarrhoea Virus (BVDV) (lab work ongoing) -­‐-­‐ Neospora (Neospora caninum) (lab work ongoing) -­‐-­‐ • Tick borne diseases quite widespread in the study areas • Preliminary results suggest discrepancies with farmers percepGon of disease relaGve importance • Se / Sp of diagnosGcs not considered Table 2. PRELIMINARY ELISA results and Top 3 diseases (highlighted) according to laboratory results and farmers percepGons. Table 1. List of ca]le diseases included in the study Map of TANZANIA showing study sites: • Tanga region (Lushoto and Handeni Districts); • Morogoro region (Mvomero and Kilosa Districts) • Further lab work to be conducted • Understand IN THE disease pa]erns according to (i) geographical locaGon (ii) farming systems and (iii) farmers pracGces. PIPELINE 1 Integrated Science Dep. ILRI (Kenya); 2 Biosciences Department, ILRI (Kenya); 3 Dept of Animal Science and ProducUon, SUA (Tanzania) September 2014