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2019 HPCC
Systems®
Community Day
Challenge Yourself –
Challenge the Status Quo
Meng Han, Ph.D.
Assistant Professor
College of Computing and Software Engineering
Kennesaw State University
The Power of HPCC Systems: A Bio-tech Industry Practice
2
• Introduction
• Who are we?
• What are we doing?
• Our Research Practice
• Academic Beginning
• Industry Bio-Tech Practice
• HPCC Systems
• Great Data Processing
• Advanced HPCC Systems
3
Outline
Introduction: Academia
• The Data-driven Intelligence Research (DIR) Lab does research into future
generations of Data-driven Intelligence and its applications. Despite recent
advances and enthusiasm in Data Science and Artificial Intelligence, most of
current applications are fairly simple or narrow. Our research aims to create
science and technology that will surmount these limitations and enable Data-
driven Intelligence to meaningfully improve many aspects of people's lives.
The Power of HPCC Systems: A Bio-tech Industry Practice 4
Research Scope:
• Data Science
• Artificial Intelligence
• Data Security & Privacy
Technology Scope:
• Data Manipulation
• Data Visualization
• Mining and Learning Skills
Contact:
Dr. Meng Han (Director)
Email: menghan@kennesaw.edu
Tel: 470-578-3801
Please contact me if you are interested
in any data-driven related idea, project.
Introduction: Industry
• Founded in 1998, Omega Bio-tek, Inc.
• Omega Bio-tek stay at the forefront of nucleic acid purification worldwide.
• Offer high quality products to help you improve your workflows in Bio-tech.
• Diverse portfolio consists of 900+ products ranging from RNA isolation from
plants to DNA extraction from dried blood spots.
• Microbiome Gut profiling kit
• Analysis for Gut microbiome
The Power of HPCC Systems: A Bio-tech Industry Practice 5
• Introduction
• Who are we?
• What are we doing?
• Our Research Practice
• Academic Beginning
• Industry Bio-Tech Practice
• HPCC Systems
• Great Data Processing
• Advanced HPCC Systems
6
Outline
Introduction: Fact
The Power of HPCC Systems: A Bio-tech Industry Practice 7
https://www.elijahlist.com/mobile/display_word.html?ID=14980
https://www.sciencedirect.com/topics/medicine-and-dentistry/gut-microbiome
Introduction: how did we meet?
The Power of HPCC Systems: A Bio-tech Industry Practice 8
Introduction: Fact
The Power of HPCC Systems: A Bio-tech Industry Practice 9
https://www.bbc.co.uk/food/articles/what_should_you_eat_for_a_healthy_gut
https://www.frontiersin.org/articles/10.3389/fphys.2016.00606/full
Academic Beginning
https://www.cio.com/article/3008628/healthcare-analytics-early-days-for-many-significant-progress-for-some.htm
• Flu Prediction
• Cancer Detection
• Mental Disease
Academic Beginning
http://www.truelove4hope.org
https://www.stuartduncan.name/diagn
osing-autism/how-to-safely-motivate-
autistic-children/
https://gut.bmj.com/content/68/Suppl_1/A40.2
https://www.autismspeaks.org/science-news/cdc-increases-
estimate-autisms-prevalence-15-percent-1-59-children
https://www.parentingspecialneeds.org/arti
cle/gut-brain-connection-special-needs/
Current Project with Omega Bio-tek:
• 2-3 years period: 3 phases
• Phase 1: 40 children’s gut test (Pre-test and Post-test)
• Most comprehensive and largest data scale in history
• Deep learning and bio data modeling
• Data automatically processing
Academic Beginning
http://www.truelove4hope.org
https://www.ieiworld.com/en/news/con_show.php?op=showone&cid=10
26
A staff charge for
receiving the
mail, convert
them to the
formal dataset
Manual
Analytics
California
Customer
UK
Customer
New York
Customer
Omega Customer
Mail by USPS
Email
Practice: before
Mail by UPS/Fedex
A staff charge for
receiving the
mail, convert
them to the
formal dataset
ECL
Program
Kafka Message Server
Biology
Dataset
Parse & save
Customer
Report
Analysis
California
Customer
UK
Customer
New York
Customer
Mail by UPS/Fedex
Mail by USPS
Email
Omega Customer
Manual
Analytics
Practice: after
• Introduction
• Who are we?
• What are we doing?
• Our Research Practice
• Academic Beginning
• Industry Bio-Tech Practice
• HPCC Systems
• Great Data Processing
• Advanced HPCC Systems
15
Outline
HPCC Systems
• Great Data Processing
• HPCC Systems architecture makes it cost-effective, fast, powerful and
scalable
• Simple and powerful data programming language (ECL)
• Compelling solution to solve data intensive computing needs
• Advanced HPCC Systems
• Bio-Tech has high demand on Storage, Annotation, and Analysis
• HPCC Systems perfectly fitting the process of Bio-tech Data
• Straightforward feedback of the project
16
Contact me:
menghan@kennesaw.edu
www.dir-lab.org
View this presentation on YouTube:
https://www.youtube.com/watch?v=O-qJwxhQTzA&list=PL-8MJMUpp8IKH5-
d56az56t52YccleX5h&index=2&t=0s (1:42:40)
Presentation Title Here (Insert Menu > Header & Footer > Apply) 18

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The Power of HPCC Systems - a Bio-tech Industry Practice

  • 1. 2019 HPCC Systems® Community Day Challenge Yourself – Challenge the Status Quo Meng Han, Ph.D. Assistant Professor College of Computing and Software Engineering Kennesaw State University
  • 2. The Power of HPCC Systems: A Bio-tech Industry Practice 2
  • 3. • Introduction • Who are we? • What are we doing? • Our Research Practice • Academic Beginning • Industry Bio-Tech Practice • HPCC Systems • Great Data Processing • Advanced HPCC Systems 3 Outline
  • 4. Introduction: Academia • The Data-driven Intelligence Research (DIR) Lab does research into future generations of Data-driven Intelligence and its applications. Despite recent advances and enthusiasm in Data Science and Artificial Intelligence, most of current applications are fairly simple or narrow. Our research aims to create science and technology that will surmount these limitations and enable Data- driven Intelligence to meaningfully improve many aspects of people's lives. The Power of HPCC Systems: A Bio-tech Industry Practice 4 Research Scope: • Data Science • Artificial Intelligence • Data Security & Privacy Technology Scope: • Data Manipulation • Data Visualization • Mining and Learning Skills Contact: Dr. Meng Han (Director) Email: menghan@kennesaw.edu Tel: 470-578-3801 Please contact me if you are interested in any data-driven related idea, project.
  • 5. Introduction: Industry • Founded in 1998, Omega Bio-tek, Inc. • Omega Bio-tek stay at the forefront of nucleic acid purification worldwide. • Offer high quality products to help you improve your workflows in Bio-tech. • Diverse portfolio consists of 900+ products ranging from RNA isolation from plants to DNA extraction from dried blood spots. • Microbiome Gut profiling kit • Analysis for Gut microbiome The Power of HPCC Systems: A Bio-tech Industry Practice 5
  • 6. • Introduction • Who are we? • What are we doing? • Our Research Practice • Academic Beginning • Industry Bio-Tech Practice • HPCC Systems • Great Data Processing • Advanced HPCC Systems 6 Outline
  • 7. Introduction: Fact The Power of HPCC Systems: A Bio-tech Industry Practice 7 https://www.elijahlist.com/mobile/display_word.html?ID=14980 https://www.sciencedirect.com/topics/medicine-and-dentistry/gut-microbiome
  • 8. Introduction: how did we meet? The Power of HPCC Systems: A Bio-tech Industry Practice 8
  • 9. Introduction: Fact The Power of HPCC Systems: A Bio-tech Industry Practice 9 https://www.bbc.co.uk/food/articles/what_should_you_eat_for_a_healthy_gut https://www.frontiersin.org/articles/10.3389/fphys.2016.00606/full
  • 11. • Flu Prediction • Cancer Detection • Mental Disease Academic Beginning http://www.truelove4hope.org https://www.stuartduncan.name/diagn osing-autism/how-to-safely-motivate- autistic-children/ https://gut.bmj.com/content/68/Suppl_1/A40.2 https://www.autismspeaks.org/science-news/cdc-increases- estimate-autisms-prevalence-15-percent-1-59-children https://www.parentingspecialneeds.org/arti cle/gut-brain-connection-special-needs/
  • 12. Current Project with Omega Bio-tek: • 2-3 years period: 3 phases • Phase 1: 40 children’s gut test (Pre-test and Post-test) • Most comprehensive and largest data scale in history • Deep learning and bio data modeling • Data automatically processing Academic Beginning http://www.truelove4hope.org https://www.ieiworld.com/en/news/con_show.php?op=showone&cid=10 26
  • 13. A staff charge for receiving the mail, convert them to the formal dataset Manual Analytics California Customer UK Customer New York Customer Omega Customer Mail by USPS Email Practice: before Mail by UPS/Fedex
  • 14. A staff charge for receiving the mail, convert them to the formal dataset ECL Program Kafka Message Server Biology Dataset Parse & save Customer Report Analysis California Customer UK Customer New York Customer Mail by UPS/Fedex Mail by USPS Email Omega Customer Manual Analytics Practice: after
  • 15. • Introduction • Who are we? • What are we doing? • Our Research Practice • Academic Beginning • Industry Bio-Tech Practice • HPCC Systems • Great Data Processing • Advanced HPCC Systems 15 Outline
  • 16. HPCC Systems • Great Data Processing • HPCC Systems architecture makes it cost-effective, fast, powerful and scalable • Simple and powerful data programming language (ECL) • Compelling solution to solve data intensive computing needs • Advanced HPCC Systems • Bio-Tech has high demand on Storage, Annotation, and Analysis • HPCC Systems perfectly fitting the process of Bio-tech Data • Straightforward feedback of the project 16
  • 18. View this presentation on YouTube: https://www.youtube.com/watch?v=O-qJwxhQTzA&list=PL-8MJMUpp8IKH5- d56az56t52YccleX5h&index=2&t=0s (1:42:40) Presentation Title Here (Insert Menu > Header & Footer > Apply) 18