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Multi-omics data integration methods
2022-12-15, Consortium MIMS ...](https://image.slidesharecdn.com/2022-12-15vialaneixmims-221215150225-bef4c8e0/75/Multi-omics-data-integration-methods-kernel-and-other-machine-learning-approaches-13-2048.jpg?cb=1671116977)
![Kernel examples
1. Rp observations: Gaussian kernel Kii′ = e−γ∥xi −xi′ ∥2
2. nodes of a graph: [Kondor and Lafferty, 2002]...](https://image.slidesharecdn.com/2022-12-15vialaneixmims-221215150225-bef4c8e0/75/Multi-omics-data-integration-methods-kernel-and-other-machine-learning-approaches-25-2048.jpg?cb=1671116977)
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Science (May 2015) - Studies on:
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[de Vargas et al., 2015],
▶ ocean ...](https://image.slidesharecdn.com/2022-12-15vialaneixmims-221215150225-bef4c8e0/75/Multi-omics-data-integration-methods-kernel-and-other-machine-learning-approaches-34-2048.jpg?cb=1671116977)
![Extensions
[Brouard et al., 2022] and mixKernel
▶ extended to unsupervised (exploratory) learning
argmin
w∈{0,1}p
∥Kw
x − ...](https://image.slidesharecdn.com/2022-12-15vialaneixmims-221215150225-bef4c8e0/75/Multi-omics-data-integration-methods-kernel-and-other-machine-learning-approaches-41-2048.jpg?cb=1671116977)
![Extensions
[Brouard et al., 2022] and mixKernel
▶ extended to unsupervised (exploratory) learning
argmin
w∈{0,1}p
∥Kw
x − ...](https://image.slidesharecdn.com/2022-12-15vialaneixmims-221215150225-bef4c8e0/75/Multi-omics-data-integration-methods-kernel-and-other-machine-learning-approaches-42-2048.jpg?cb=1671116977)
![KOKFS illustration
Used with covid19 dataset from [Haug et al., 2020]:
▶ inputs: 46 government measures (0/1 encoding)
▶ o...](https://image.slidesharecdn.com/2022-12-15vialaneixmims-221215150225-bef4c8e0/75/Multi-omics-data-integration-methods-kernel-and-other-machine-learning-approaches-43-2048.jpg?cb=1671116977)
![KOKFS illustration
Used with covid19 dataset from [Haug et al., 2020]:
▶ inputs: 46 government measures (0/1 encoding)
▶ o...](https://image.slidesharecdn.com/2022-12-15vialaneixmims-221215150225-bef4c8e0/75/Multi-omics-data-integration-methods-kernel-and-other-machine-learning-approaches-44-2048.jpg?cb=1671116977)
