Demystifying MySQL Replication Crash Safety

Demystifying MySQL
Replication Crash Safety
Presented at Percona Live Europe 2018 in Frankfurt
by Jean-François Gagné
Senior Infrastructure Engineer / System and MySQL Expert
jeanfrancois AT messagebird DOT com

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Introducing MessageBird
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Summary
(Demystifying MySQL Replication Crash Safety – PLEU2018)
• Helicopter view of – and then Zoom in – Replication and Crash Safety
• MySQL 5.6 solution (and its problems)
• Complexifying things with GTIDs and Multi-Threaded Slave (MTS)
• Impacts of reducing / compromising durability
(sync_binlog != 1 and trx_commit != 1)
• Overview of related subjects: Semi-Sync, MariaDB & Pseudo-GTIDs
• Closing, links, bugs and questions

Overview of MySQL Replication
One master with one or more slaves:
• The master records transactions in a journal (binary logs); each slave:
• Downloads the journal and saves it locally in the relay logs (IO thread)
• Executes the relay logs on its local database (SQL thread)
• Could also produce binary logs to be a master (log-slave-updates – lsu)

Replication Crash Safety
What do I mean by Replication Crash Safety ?
• When a slave crashes, it is able to resume replication after recovery
(OK if rewinds its state after recovery, as long as it is eventually consistent)
• When a master crashes, slaves are able to resume replicating from it
• All above without sacrificing data consistency
• In other words: ACID is not compromised by a slave or a master crash
(Discussion limited to transactional SE: InnoDB, TokuDB, MyRocks; obviously not MyISAM)
Intermediate masters (IM) qualify both as master and slave
Slaves are potential master (and IM) in some failover strategy
(Proving replication crash un-safety is easy, proving safety is hard) 5

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State of the Dolphin and of the Sea Lion
State of the Dolphin in Replication Crash Safety:
• MySQL 5.5 is not crash safe
• MySQL 5.6 can be made crash safe (it is not by default)
• MySQL 5.7 is mostly the same as 5.6
(with complexity added by Logical Lock parallel replication)
• MySQL 8.0 is crash safe by default
(but it can be made unsafe by “tuning” the configuration)
Quick state of the Sea Lion:
• MariaDB 5.5 is not replication crash safe
• MariaDB 10.x can be made crash safe

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Zoom in the details [1 of 3]
More details about replication:
• The IO Thread stores its state in master info (also configuration stored there)
• The SQL Thread in relay log info
slave1 [localhost] {msandbox} ((none)) > show slave statusG
*************************** 1. row ***************************
Slave_IO_State: Waiting for master to send event
[...]
Master_Log_File: mysql-bin.000001 <-------+-- master info (persisted state)
Read_Master_Log_Pos: 25489 <-------+
Relay_Log_File: mysql-relay.000002 <--+
Relay_Log_Pos: 10788 <--+
Relay_Master_Log_File: mysql-bin.000001 <--+-- relay log info (persisted state)
[...] |
Exec_Master_Log_Pos: 10575 <--+
[...]
1 row in set (0.00 sec)

More parameters: sync_master_info, sync_relay_log and sync_relay_log_info
In MySQL 5.5, master info and relay log info are files:
• No atomicity of “making progress” and “state tracking” for IO & SQL Threads
• Consistency of actual vs registered state is compromised after a crash
Ø This is why replication is not crash-safe in MySQL 5.5 8

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Even more parameters:
• sync_binlog (and innodb_flush_log_at_trx_commit – trx_commit):
• Binlogs are synchronised to disk after every N writes/transactions
(default 0 in My|SQL 5.5 and 5.6; and in 5.7 and 8.0 it is 1 which is full ACID)
• trx_commit = 1: logs written and flushed each trx (full ACID and default)
= 0: written and flushed once per second (not crash safe)
= 2: written after each trx and flushed once per second
(mysqld crash safe, not OS crash safe)

MySQL 5.6 solution [1 of 4]
Reminder: problems making MySQL 5.5 Replication Crash Un-Safe:
• The position of the SQL Thread cannot be trusted
• The position of the IO Thread cannot be trusted
• The content of the Relay Logs cannot be trusted
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The MySQL 5.6 solution
• Atomicity for SQL Thread: relay-log-info-repository = TABLE (default = FILE)
• Useless for crash safety: a parameter to store master info in a table:
• master-info-repository = TABLE (default = FILE)
• Providing a way to “fix” the relay logs: relay-log-recovery = 1 (default = 0)

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More details about Relay Log Recovery:
• relay-log-recovery is only used on mysqld startup (dynamic would be useless)
• If relay-log-recovery = 0, nothing special done (and a new relay log is created)
• If relay-log-recovery = 1:
• The position of the IO Thread is set to the position of the SQL Thread
• The position of the SQL Thread is set to the newly created relay log
• If relay-log-purge = 1: the old relay logs will be deleted on SQL Thread startup
(relay-log-recovery does not delete anything: easy to test with skip-slave-start)
Ø Said otherwise, the previous relay logs are skipped !
(those relay logs are considered improper for SQL Thread consumption)
• This will happen even if MySQL (or the IO Thread) did not crash
OK for 1st implementation but a waste of perfectly good relay logs

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In MySQL 5.7:
• No change of defaults (for replication crash safety)
• Relay log recovery still simplistic K
In MySQL 8.0:
• Still simplistic relay log recovery L
• New defaults:
• relay-log-info-repository = TABLE J
• relay-log-recovery = 1 J
• master-info-repository = TABLE (not sure this is very useful)
Bug#74323: Avoid overloading the master NIC on relay-log-recovery of a lagging slave
Bug#74321: Execute relay-log-recovery only when needed

Adding complexity with GTIDs [1 of 2]
Not only MySQL 5.6 introduces replication crash safety,
it also introduced Global Transaction IDs (GTIDs)
• This tags every transaction with an ID when writing to the binlogs
• The GTID state of the master and slaves are tracked in the binlogs
Ø IO and SQL Thread states are now partially in the binlogs (and relay logs)
• Optionally, slaves can use GTID to replicate (instead of file+position)
• This allows easier repointing of slaves to a new master (including fail over)
• This heavily relies on precise tracking of GTID states on master and slaves
Ø As this tracking is in the binlogs, this is impeded when sync_binlog != 1
Bug#70659: Make crash safe slave with gtid + less durable settings
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Adding complexity with GTIDs [2 of 2]
To make replication crash safe with GTIDs in MySQL 5.6:
• relay-log-info-repository = TABLE (default = FILE)
• relay-log-recovery = 1 (default = 0) – (Bug#92093)
• sync_binlog = 1 (default = 0)
• In 5.7, the default is sync_binlog = 1 J (two other unchanged K)
• In 8.0, all the defaults are good for crash safe replication with GTID J J
• MySQL 5.7 adds a table for storing the GTID state of slaves:
• Allows GTIDS slaves without log-slave-updates (lsu)
• With lsu, this table (mysql.gtid_executed) is not updated after each trx
Ø Missed opportunity for OS crash safety with sync_binlog != 1 L L L
Bug#92109: Make GTID replication crash safe with less durable setting 15

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Master Replication Crash Safety [1 of 5]
Relaxing durability of the binlogs implies losing GTID state (after an OS crash)
• What about the consequence on the master ? With and without GTID ?
• If sync_binlog != 1 on the master, an OS crash will lose binlogs
• With sync_binlog != 1, usually trx_commit != 1 (normally 2, but can be 0)
• trx_commit = 2 preserves data on mysqld crashes, 0 does not (à 2 is better)
Ø InnoDB will also lose transactions on an OS crash
Ø After an OS crash, InnoDB will be out-of-sync with the binlogs
Ø And we cannot trust the binlogs on such master (trx gap or ghost trx)
The failure mode will be different depending on the configuration

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With file+position
• IO Thread in vanished binlogs
• So slaves executed phantom trx
(ghost in binlogs, maybe not in InnoDB)
• When the master is restarted:
• It records trx in new binlog file
• Most slaves are broken, and they might be out-of-sync with each-others
• Some lagging slave might skip vanished binlogs

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With file+position
• IO Thread in vanished binlogs
• So slaves executed phantom trx
(ghost in binlogs, maybe not in InnoDB)
• When the master is restarted:
• It records trx in new binlog file
• Most slaves are broken, and they might be out-of-sync with each-others
• Some lagging slave might skip vanished binlogs
Ø Broken slaves have more data than the master (à data drift)
Ø And different data drift on “lucky” lagging slaves that might not break

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With GTID enabled
• Slave also executed ghost
trx vanished from binlogs
• But those are in their GTID state
• A recovered master reuses
GTIDs of the vanished trx
• Slaves magically reconnect to the master (MASTER_AUTO_POSITION = 1)
1. If master has not reused all ghost GTIDs, then the slave breaks
2. If it has, then the slave skips the new transactions à more data drift
(in illustration, the slave will skip new 50 to 58 as it has the old one)

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With GTID enabled but MASTER_AUTO_POSITION = 0
• Left as an exercise to the reader…
On the consequences of sync_binlog != 1 (part #1)
https://jfg-mysql.blogspot.com/2018/10/consequences-sync-binlog-neq-1-part-1.html
(more posts to be published in the series)

Summary of running with sync_binlog != 1:
• The binlogs – of the master or slave – cannot be trusted after an OS crash
• On a master, having mysqld normally restarts after such a crash leads to data drift
Ø After an OS crash, make sure no slaves reconnect to the recovered master
(OFFLINE_MODE = ON in config file – failing-over to a slave is the way forward)
• On slaves, having mysqld restarts after such a crash leads to truncated binlogs
Ø After an OS crash, consider purging all binlogs on the recovered slave
• Intermediate Masters (IM) are both master and slaves
Ø After an OS crash make sure no slaves reconnect to the recovered IM
Ø And consider purging all binary logs on it
• Remember: GTID state corrupted on slaves after OS crash (Bug#92109) 21

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Adding complexity with MTS [1 of 4]
Multi-Threaded Slave (MTS) in MySQL 5.6 is doing out-of-order committing
• Same for MySQL 5.7 with DATABASE and LOGICAL_CLOCK types
• LOGICAL_CLOCK also has the slave_preserve_commit_order option
(OFF by default in 5.7 and 8.0 K, with ON requiring log-slave-updates L)
(Bug#75396: Allow slave_preserve_commit_order without log-slave-updates)
Example: transactions A, B, C, D, E on the master
• On a slave, SHOW SLAVE STATUS points to B, so A is committed
• C and E are also committed, B is running and D is pending scheduling
(maybe B and D are in the same schema with DATABASE type)
With out-of-order commit, a file+position in relay log info is not enough
• GTID allows tracking complex position (generating temporary holes on slaves)
• And there is the mysql.slave_worker_info table
(https://dev.mysql.com/worklog/task/?id=5599: for more details)

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Without GTID, resuming replication after a crash needs filling the gap in trx
• Manual, error-prone, and not always possible before 5.6.31 and 5.7.13 (Bug#77496)
• Now, automated by doing START SLAVE UNTIL SQL_AFTER_MTS_GAPS
• But this needs relay logs, which might have vanished after an OS crash (Bug#81840)

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• Bug#81840 makes MTS with File+Position OS crash unsafe (safe for mysqld crash)
• Hard to accept workaround: sync_relay_log = 1 (performance killer)
• Full state in mysql.slave_worker_info à recovery possible with a lot of effort
• The good solution would be a better relay log recovery (Bug#93081)

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With GTID, MTS in MySQL 5.6, 5.7 & 8.0 is replication crash safe:
• But it needs MASTER_AUTO_POSITION = 1 (and relay log recovery Bug#92093)
• And it comes with all the GTID “goodies” (rogue transactions, lsu for 5.6, …)
• Also needs sync_binlog = 1 (if 5.7+, also works without binlogs or lsu off)
• And care with sync_binlog != 1 on the master (need to fail over if OS crash)
(sync_binlog != 1 should not be needed in 95% of cases)
(Group Commit and MTS make this optimisation almost obsolete)
Example: A, B, C, D, E on the master with GTID 10, 11, 12, 13, 14:
• GTID executed on the slave is 1-10:12:14 before a crash
• Replication resumes by fetching 11:13:15… (after relay log recovery)

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With GTID, MTS in MySQL 5.6, 5.7 & 8.0 is should be crash safe :
• But it needs MASTER_AUTO_POSITION = 1 (and relay log recovery Bug#92093)
• And it comes with all the GTID “goodies” (rogue transactions, lsu for 5.6, …)
• Also needs sync_binlog = 1 (if 5.7+, also works without binlogs or lsu off)
• And care with sync_binlog != 1 on the master (need to fail over if OS crash)
Bug#92882: MTS not replication crash-safe with GTID and all the right parameters
(Only applies to Operating System crashes)
Example: A, B, C, D, E on the master with GTID 10, 11, 12, 13, 14:
• GTID executed on the slave is 1-10:12:14 before Operating System crash
• Relay log recovery tries to “fill the gaps” but fails because relay logs are gone
(This might be a regression from the fix of Bug#77496)
(Easy workaround: stop slave; reset slave; start slave;)

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Related subjects – Semi-Sync
In this talk, we did not cover master failover explicitly,
when a master crashes in an unrecoverable way, failover needs to happen
When failing-over to a slave, committed transactions can be lost
(Some transactions on the crashed master might not have reached slaves)
à violation of durability (ACID) in the replication topology (distributed system)
Except if lossless semi-sync is used, more details in:
Question about Semi-Synchronous Replication: the Answer with All the Details
https://www.percona.com/community-blog/2018/08/23/question-about-semi-synchronous-
replication-answer-with-all-the-details/

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Related subjects – MariaDB
MariaDB still stores its master info and relay log info in files
• But it stores GTID state of slaves in the mysql.gtid_slave_pos table
Ø MariaDB is replication crash safe when using GTID slave positioning
Also, it has an interesting feature:
• If using more than one storage engine, a single state table is not optimal
• Having one such table per storage engine could be better
Improving replication with multiple storage engines (MariaDB 10.3)
https://kristiannielsen.livejournal.com/19223.html

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Related subjects – Pseudo GTIDs
Pseudo-GTIDs:
• A way to get GTID-like features without GTIDs
• They work with any version of MySQL/MariaDB (even 5.5)
• But they assume in-order-commit à does not work with MTS
They can provide slave replication crash safety:
• With log-slave-updates and sync_binlog = 1
• Even on MySQL 5.5 or MariaDB 5.5
https://github.com/github/orchestrator/blob/master/docs/pseudo-gtid.md

Conclusion
• It is complicated and it depends…
• It has many edge cases
• It might still change as bugs are fixed
• And hopefully improvements will be made
• So sorry: there is no short version

Conclusion [2 of 5]
Some parameters never impact/improve Replication Crash Safety:
• master-info-repository, sync_master_info, sync_relay_log_info
Some parameters are always needed for Replication Crash Safety:
• relay-log-info-repository = TABLE
• relay-log-recovery = 1

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Conclusion [3 of 5]
MySQL 5.6 with GTID (with and without MTS) à crash safe slave if:
• All above with sync_binlog = 1 (not default) and MASTER_AUTO_POSITION = 1
and maybe a “stop slave; reset slave; start slave;” (Bug#92882)
MySQL 5.6 without GTID and with MTS à not always crash safe slaves:
• OK for MySQL crashes as relay logs are not lost
• For OS crashes, losing the relay logs leads to replication breakage (Bug#81840)
• Possible to recover with some voodoo and dark magic (Bug#93081)
For master and slaves, binlogs cannot be trusted if sync_binlog != 1

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Conclusion [4 of 5]
MySQL 5.7 is mostly the same as 5.6:
• sync_binlog = 1 is the default J
• Will be crash safe with GTID and sync_binlog != 1 when Bug#92109 fixed
• LOGICAL_CLOCK with slave_preserve_commit_order like single-threaded
• Without slave_preserve_commit_order, same as MTS in 5.6
MySQL 8.0 is mostly the same as 5.7 with safer defaults:
• relay-log-info-repository = TABLE J
• relay-log-recovery = 1 J
• But default for slave_preserve_commit_order is still 0 K

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Conclusion [5 of 5]
Care with MTS as it has many traps
And in all cases:
• Relay log recovery needs to re-download relay logs from the master
• High load in case of lagging (or delayed) slaves L
• Will fail if the binary logs were purged from the master L
• Relay log recovery also fails for MTS and OS crashes (vanished relay logs)
L L L
We need a better Relay Log Recovery !
Bug#74321, Bug#74323, Bug#74324, Bug#81840
Bug#92882, Bug#93081

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Links [1 of 3]
Crash-Safe MySQL Replication - A Visual Guide
https://hackmongo.com/post/crash-safe-mysql-replication-a-visual-guide/
(diagrams in this talk are inspired by this post)
Jean-François’s blog posts about Replication Crash Safety:
• Better Crash-safe replication for MySQL
https://medium.com/booking-com-infrastructure/better-crash-safe-replication-for-mysql-a336a69b317f
• Replication crash safety with MTS in MySQL 5.6 and 5.7: reality or illusion?
https://jfg-mysql.blogspot.com/2016/01/replication-crash-safety-with-mts.html
• A discussion about sync-master-info and other replication parameters
https://jfg-mysql.blogspot.com/2016/08/discussion-about-sync-master-info-and-replication-parameters.html
• On the consequences of sync_binlog != 1 (part #1)
https://jfg-mysql.blogspot.com/2018/10/consequences-sync-binlog-neq-1-part-1.html

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Links [2 of 3]
Directly related bugs:
• Bug#70669: Slave can't continue repl. after master's recovery (old – 5.6.14, and fixed – 5.6.17)
• Bug#70659: Make crash safe slave work with gtid + less durable settings
• Bug#74321: Execute relay-log-recovery only when needed
• Bug#74323: Avoid overloading the master NIC on relay-log-recovery of a lagging slave
• Bug#74324: Make keeping relay logs (relay_log_purge = 0) crash safe
• Bug#77496: Replication position lost after crash on MTS configured slave (really fixed ?)
• Bug#81840: Automatic Replication Recovery Does Not Handle Lost Relay Log Events
• Bug#92093: Replication crash safety needs relay_log_recovery even with GTID
• Bug#92109: Please make replication crash safe with GITD and less durable setting (bis)
• Bug#92882: MTS not replication crash-safe with GTID and all the right parameters
• Bug#93081: Please implement a better relay log recovery
Somehow related bugs:
• Bug#75396: Allow slave_preserve_commit_order without log-slave-updates
• Bug#92891: Please make relay_log_space_limit dynamic

Links [3 of 3]
• Question about Semi-Synchronous Replication: the Answer with All the Details
https://www.percona.com/community-blog/2018/08/23/question-about-semi-synchronous-replication-answer-with-all-the-details/
• Improving replication with multiple storage engines (in MariaDB 10.3)
https://kristiannielsen.livejournal.com/19223.html
• Pseudo-GTID and Orchestrator:
https://github.com/github/orchestrator/blob/master/docs/pseudo-gtid.md
https://speakerdeck.com/shlominoach/pseudo-gtid-and-easy-mysql-replication-topology-management
• The Full MySQL and MariaDB Parallel Replication Tutorial
https://www.slideshare.net/JeanFranoisGagn/the-full-mysql-and-mariadb-parallel-replication-tutorial
• Arg: relay_log_space_limit is (still) not dynamic !
https://jfg-mysql.blogspot.com/2018/10/arg-relay-log-space-limit-is-still-not-dynamic.html
• Evaluating MySQL Parallel Replication Part 2: Slave Group Commit
https://medium.com/booking-com-infrastructure/evaluating-mysql-parallel-replication-part-2-slave-group-commit-459026a141d2
• Evaluating MySQL Parallel Replication Part 4: More Benchmarks in Production
https://medium.com/booking-com-infrastructure/evaluating-mysql-parallel-replication-part-4-more-benchmarks-in-production-49ee255043ab

Thanks !
Presented at Percona Live Europe 2018 in Frankfurt
by Jean-François Gagné
Senior Infrastructure Engineer / System and MySQL Expert
jeanfrancois AT messagebird DOT com

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