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Training in Bioequivalence Analysis
June 7-11, Dow Medical University,
Karachi, Pakistan
Instructor: Sarfaraz K. Niazi
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 Bioequivalence Review
 Contract Research Organization
– Good Clinical Practice
– Good Laboratory Practice
– 21 CFR 11 Compliance
– Auditing by DRAP
 Protocol Review
 Statistical Review
 Report Writing
Training in Bioequivalence Analysis
Course Description
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 Concept of bioavailability
 Historical cases of bio-inequivalence
 Bioequivalence testing : EMA and FDA guidelines
 Study designs
 Bioequivalence criteria
 Special issues
Bioequivalence Review
Discussion Topics
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PHARMACOKINETICS
Bioequivalence Review
Temporal characteristics of drug effect and relationship to the
therapeutic window (e.g., single dose, oral administration).
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The extent and the rate to which a drug substance or its
therapeutic moiety is delivered from a pharmaceutical form
into the general circulation
 absolute bioavailability
 relative bioavailability
Bioequivalence Review
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BIOAVAILABILITY
Changes in extent and/or rate of absorption influence the
drug plasma concentration-time profile and may therefore
affect the therapeutic efficacy
Tmax
Cmax
AUC1=AUC2=AUC3
AUC1AUC2AUC3
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ABSOLUTE BIOAVAILABILITY
Bioequivalence Review
oral
iv
iv
oral
DOSE
DOSE
AUC
AUC
F 

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RELATIVE BIOAVAILABILITY
□ tablet B
formB
formA
rel
AUC
AUC
F 
 tablet A
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BIOAVAILABILITY
formulation and physicochemical factors influencing drug
absorption and bioavailability
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 Clinical reports in the 60’s and the 70’s documenting medical problems due to
bio-inequivalence
 Dosage form containing the active substance should be known and reproducible
 Outbreak of phenytoin intoxication around 1970 in
Queensland, Australia
 Calcium sulphate dihydrate in the phenytoin capsules
had been replaced by lactose
BIOAVAILABILITY
Historical Perspective
Tyrer et al.: Outbreak of anticonvulsant intoxication in
an Australian city. Brit. Med. J. 4: 271-273, 1970.
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Examples
BIOAVAILABILITY
Lindenbaum et al.: Variation in the biologic availability of digoxin
from four preparations. New Engl. J. Med. 1344-1347, 1971.
0 1 2 3 4 5 6
0.0
0.5
1.0
1.5
2.0
2.5 Burroughs Wellcome
APC batch B15703
Davis-Edwards
APC batch 24928
TIME (hours)
SERUM
CONCENTRATION
(ng/ml)
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 BE tests are not only required for the registration of generic drugs but are also carried
out during the development of new drugs: e.g. during scale-up and for post-approval
changes (SUPAC).
BIOEQUIVALENCE TESTING
Continuous Process
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Check it out routinely
FDA Guidance for Industry
http://www.fda.gov/downloads/Drugs/GuidanceComplianceRegulatoryInformat
ion/Guidances/ucm072872.pdf
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 In 1984, United States Congress passed the “Drug Price Competition and Patent Term
Restoration Act of 1984” that authorized FDA to approve generic drug products through
BA and BE studies.
 Because generic drugs would be interchanged with innovator products in the market
place, it must be demonstrated that the safety and efficacy of generics are comparable
to the safety and efficacy of the corresponding innovator drugs. Assessment of
“interchangeability” between the generic and the innovator product is carried out by a
study of “in vivo equivalence” or “bioequivalence” (BE).
 Product-specific guidance available on FDA website; continuously changed.
Bioequivalence Review
Basis of Bioequivalence
https://www.fda.gov/Drugs/GuidanceComplianceRegulatoryInformation/Guidances/ucm075207.htm
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 FDA: "the absence of a significant difference in the rate and extent to which the active
ingredient or active moiety in pharmaceutical equivalents or pharmaceutical alternatives
becomes available at the site of drug action when administered at the same molar dose
under similar conditions in an appropriately designed study.”
– FDA considers two products bioequivalent if the 90% CI of the relative mean Cmax, AUC(0–
t) and AUC(0–∞) of the test (e.g., generic formulation) to reference (e.g. innovator brand
formulation) should be within 80% to 125% in the fasting state.
– May also requires administration after an appropriate meal at a specified time before taking
the drug, a so-called "fed" or "food-effect" study.
– A food-effect study requires the same statistical evaluation as the fasting study
– Protocols provided by FDA on its website; continuously changing:
https://www.dropbox.com/s/7z5qeud79fvjz1a/Screenshot%202018-05-
28%2011.09.09.png?dl=0
Bioequivalence Review
FDA
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 "two pharmaceutical products are bioequivalent if they are pharmaceutically equivalent
or pharmaceutical alternatives, and their bioavailabilities, in terms of rate (Cmax and tmax)
and extent of absorption (area under the curve), after administration of the same molar
dose under the same conditions, are similar to such a degree that their effects can be
expected to be essentially the same”
– Two formulation bioequivalent if the 90% CI for the ratio multisource (generic)
product/comparator lie within 80.00-125.00% acceptance range for AUC0–t and Cmax. For high
variable finished pharmaceutical products, the applicable acceptance range for Cmax can be
69.84-143.19%
Bioequivalence Review
WHO
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 TGA: “if the 90% confidence intervals (90% CI) of the rate ratios, between the two
preparations, of Cmax and AUC lie in the range 0.80–1.25. Tmax should also be similar
between the products. There are tighter requirements for drugs with a
narrow therapeutic index and/or saturable metabolism – thus no generic products exist
on the Australian market for digoxin or phenytoin for instance.
 EMA: “two medicinal products are bioequivalent if they are pharmaceutically equivalent
or pharmaceutical alternatives and if their bioavailabilities after administration in the
same molar dose are similar to such a degree that their effects, with respect to both
efficacy and safety, will be essentially the same. This is considered demonstrated if the
90% confidence intervals (90% CI) of the ratios for AUC0–t and Cmax between the two
preparations lie in the range 80–125%.”
Bioequivalence Review
EU, Australia
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 “Two medicinal products containing the same active substance are considered bioequivalent if
they are pharmaceutically equivalent or pharmaceutical alternatives and their bioavailabilities
(rate and extent of absorption) after administration in the same molar dose lie within acceptable
predefined limits. These limits are set to ensure comparable in vivo performance, i.e. similarity in
terms of safety and efficacy.”
– The number should be based on an appropriate sample size calculation (NLT 12), healthy volunteers,
to reduce variability, strict inclusion/exclusion criteria, subjects could belong to either sex,
preferably non-smokers and without a history of alcohol or drug abuse, patients, if the
investigative active substance is known to have serious adverse effects considered
unacceptable for healthy volunteers
Bioequivalence Review
EMA
Current April 2017
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– Bioanalytical Method Validation Guidance for Industry Final 05/21/18
– Waiver of In Vivo Bioavailability and Bioequivalence Studies for Immediate-Release Solid Oral Dosage Forms Based on a Biopharmaceutics Classification
System. Guidance for Industry Final 12/22/17
– Dissolution Testing and Specification Criteria for Immediate-Release Solid Oral Dosage Forms Containing Biopharmaceutics Classification System Class 1
and 3 Drugs Guidance for Industry Draft 07/31/15
– Bioavailability and Bioequivalence Studies Submitted in NDAs or INDs — General Considerations Draft 03/17/14
– Bioequivalence Studies With Pharmacokinetic Endpoints for Drugs Submitted Under an Abbreviated New Drug Application Draft 12/04/13
– Statistical Information from the June 1999 Draft Guidance and Statistical Information for In Vitro Bioequivalence 08/18/1999 Draft 04/11/03
– Bioavailability and Bioequivalence Studies for Nasal Aerosols and Nasal Sprays for Local Action Draft 04/03/03
– Food-effect Bioavailability and Fed Bioequivalence Studies Final 12/01/02
– Statistical Approaches to Establishing Bioequivalence Final 02/01/01
– Extended Release Oral Dosage Forms: Development, Evaluation, and Application of In Vitro/In Vivo Correlations Final 09/01/97
– Dissolution Testing of Immediate Release Solid Oral Dosage Forms Final 08/01/97
– Topical Dermatologic Corticosteroids: in Vivo Bioequivalence Final 06/02/95
– Metaproterenol Sulfate and Albuterol Metered Dose Inhalers In Vitro Final 06/27/89
Bioequivalence Review
FDA Guidance Documents: Current May 2018
https://www.fda.gov/Drugs/GuidanceComplianceRegulatoryInformation/Guidances/ucm064964.htm
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 Pharmacokinetic endpoint
 Pharmacodynamic endpoint
 Clinical endpoint
 In vitro endpoint
Primary
Bioequivalence Endpoint
Bioequivalence Review
Derived
 Study design and protocol
 Bioanalytical methods and validation
 Selection of appropriate analyte(s)—
parent drug and/or metabolite, prodrug
 Bioequivalence metrics
 Data transformation
 Statistical approaches and analysis
 Establishment of bioequivalence criteria
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 Classical blood level profiling in healthy subjects of patients
 An in vitro test correlating bioavailability
 Urinary excretion of active/metabolite if enough excreted
 Pharmacologic end-point study: if no blood levels or unrelated to action
 Clinical end-point study: no blood levels, no pharmacologic model
 Currently available in vitro test acceptable to FDA (dissolution)
Bioequivalence Review
Evidence to Measure Bioequivalence
Preferred Hierarchy
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 Therapeutic Factors
– Clinical trials
– Controlled observations on patients
– Well-controlled bioequivalence studies that:
• The drug exhibits a low therapeutic ratio
• The drug requires careful dosage titration
• Bioinequivalence would produce adverse prophylactic or therapeutic effects
Bioequivalence Review
Factors Determining BE Requirements
Preferred Hierarchy
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 Pharmacokinetic factors evidence that the drug entity:
– Is absorbed from localized sites in the gastrointestinal tract
– Is subject to poor absorption
– Is subject to first-pass metabolism
– Requires rapid dissolution and absorption for effectiveness
– Is unstable in specific portions of the gastrointestinal tract
– Is subject to dose-dependent kinetics in or near the therapeutic range
Bioequivalence Review
Factors Determining BE Requirements
Preferred Hierarchy
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 Physiochemical factors evidence that the drug:
– Possesses low solubility in water or gastric fluids
– Is dissolved slowly from one or more of its dosage forms
– Particle size and/or surface area affects bioavailability
– Exhibits certain physical-structural characteristics e.g., polymorphism, solvates, etc. which
modify its bioavailability
– Has a high ratio of excipients to active ingredients as formulated
– Has a bioavailability which may be affected by the presence or absence of hydrophilic or
hydrophobic excipients and lubricant
Bioequivalence Review
Factors Determining BE Requirements
Preferred Hierarchy
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 Area under the curve
 Rate of absorption
 Cmax and AUC 0-LLOQ
 Sponsor to provide rationale for CI
 Tmax in single dose studies and Cmin in multiple dose studies assessed by
clinical judgement.
Bioequivalence Review
Pivotal Parameters
Preferred Hierarchy
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 Assay specificity at low concentration
 Assuming absorption rates faster than elimination rate
 Extrapolation of or urinary excretion data to compensate for missing points; 3 half-life
for plasma and 7 for urinary excretion studies
 Insufficient points to characterize the profile; loss of AUC
 Variation in elimination rates; need K for each subject
 Comparison between studies
 Superimposing to allow 20% variation for clinical significance
 Compendial compliance mistaken for bioequivalence
Bioequivalence Review
Common Mistakes
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 IV, IM, SC, same concentration and same excipients
 Oral solutions not containing excipient to affect GIT or absorption
 Gel-based
 Powder for reconstitution as a solution meeting above
 Otic, ophthalmic aqueous, same active in same concentration
 Aqueous solutions same concentration, essentially same excipients
 Inhalation or nasal spray aqueous solution same active and concentration but diff
device
Bioequivalence Review
Self-evident--waived
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 Same dosage form, different strength, proportionally similar active and inactive
manufactured at the same site approved
 BA has been demonstrated
 Meet in vitro method with in vivo correlation approved
 Evidence that ratio of active and inactive are same
 Reformulated same except for different color, flavor, or preservative
 Using an approved in vitro test
Bioequivalence Review
In Vitro
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 Crossover design and alternatives
 Single- vs. multiple-dose studies
 Pharmacokinetic characteristics
 Subjects
 Statistical models
Design of Bioequivalence Studies
Models
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BE Study Design
Standard 2×2 Crossover design
Subjects
Randomization
Sequence 1
Sequence 2
Period
I II
Reference Test
Test Reference
Washout
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 A bioequivalence study should be designed in such a way that the formulation effect can be
distinguished from other effects. In the standard situation of comparing a test formulation (T) with
a reference formulation (R), the two-period, two-sequence crossover design is the RT/TR
design.
 Subjects are randomly allocated to two treatment sequences; in sequence 1, subjects receive
the reference formulation and test formulation in periods 1 and 2, respectively, while in sequence
2, subjects receive the formulations in reverse order.
 Between period 1 and period 2 is a washout period, which has to be sufficiently long to ensure
that the effect of the preceding formulation has been eliminated.
BE Study Design
Standard 2×2 Crossover design
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BE Study Design
Two-group parallel design
Subjects
Randomization Group 1
Group 2
Reference
Test
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 Each subject receives one and only one formulation of a drug in a random fashion.
 Usually each group contains the same number of subjects.
 Higher subject numbers compared to a cross-over design, since the between-subject
variability determines sample size (rather than within-subject variability).
BE Study Design
Two-group parallel design
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 Advantages
– Clinical part (sometimes) faster than crossover.
– Straightforward statistical analysis.
– Drugs with long half life.
– Studies in patients.
 Disadvantages
– Lower statistical power than crossover (rule of thumb: subject number should
at least be doubled).
– Phenotyping mandatory for drugs showing polymorphism
BE Study Design
Two-group parallel design
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Replicate 4-period, 2-sequence, 2-formulation design
BE Study Design
R
A
N
D
O
M
I
Z
A
T
I
O
N
subjects
sequence 1
sequence 2
R
T
T
R
period
T R
R T
I II III IV
wash-out
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 In general, single-dose studies will suffice
 Steady-state studies may be required in:
– The case of dose- or time-dependent pharmacokinetics.
– The case of some modified release products (prolonged release formulations
and transdermal drug delivery systems), steady-state studies are required in
addition to the single-dose investigations.
 Steady-state studies can be considered:
– If problems of sensitivity preclude sufficiently precise plasma concentration
measurements after single dose administration
BE Study Design
Single- vs. multiple-dose studies
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 Population to minimizing variability and permitting detection of differences between
pharmaceutical products: healthy volunteers, either sex; [(childbearing age risk); between 18–55
years old, of weight within the normal range, preferably nonsmokers, and without a history of
alcohol or drug abuse.
 They should undergo a routine screening of clinical laboratory tests and a comprehensive
medical examination.
 If the investigated active substance is known to have adverse effects and the pharmacological
effects or risks are considered unacceptable for healthy volunteers, it may be necessary to use
patients instead, under suitable precautions and supervision.
 Phenotyping and/or genotyping of subjects should be considered for exploratory bioavailability
studies and all studies using parallel group design. If the metabolism of a drug is known to be
affected by a major genetic polymorphism, studies could be performed in panels of subjects of
known phenotype or genotype for the polymorphism in question.
BE Study Design
Subjects
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 Average bioequivalence
– two-period, two-sequence crossover design, average bioequivalence is concluded if the two-
sided 90 % confidence interval for the test/reference ratio of population means is within the
appropriate bioequivalence acceptance range, for example (0.80, 1.25).
 Individual bioequivalence
– The primary objective for introducing individual bioequivalence is to account for subject by-
formulation interaction, and to use the comparison of the reference formulation to itself as the
basis for the comparison of test and reference.
– In contrast to average and population bioequivalence, individual bioequivalence compares
within-subject distributions of the respective bioavailability metrics, and thus, needs at least
replication of the reference formulation
BE Statistical models
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 Population bioequivalence
– Equivalence of the entire distributions of the respective metric between test and reference
– Since the lognormal distribution is fully described by the median and the variance, population
bioequivalence is commonly restricted to the equivalence of population medians and variances for test
and reference
– The conventional RT/TR crossover design may be used to assess bioequivalence in a stepwise
approach. Starting with average bioequivalence, population equivalence will be considered only if
average equivalence is approved
BE Statistical Models
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The sampling schedule should include
frequent sampling around the predicted
tmax to provide a reliable estimate of peak
exposure. In particular, the sampling
schedule should be planned to avoid
Cmax being the first point of the
concentration-time curve.
SAMPLING TIMES
BE Study Design
o
Sampling times: 0, 0.5, 1, 2, 4, 6, 8 and 12 hours.
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 Parameters: AUC0-t, Cmax in case of a single dose BE study should be analyzed
using ANOVA.; The data should be transformed prior to analysis using a logarithmic
transformation; The terms to be used in the ANOVA model are usually sequence,
subject within sequence, period and formulation.
– For drug products where rapid absorption is of importance, partial AUCs can be used as a
measure of early exposure (FDA Guidance for Industry, 2003).
– The partial area can in most cases be truncated at the population median of Tmax values for
the reference formulation: AUCtmax
 A statistical evaluation of tmax is not required but for rapid release, no apparent
difference in median tmax and its variability between test and reference product.
 For Cmax and AUC0-t the 90% confidence interval for the ratio of the test and
reference products should be contained within the acceptance interval of 80.00-
125.00%. For NTI, range narrowed; for highly variable drugs expanded.
Statistical Guideline
ANOVA
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90% CONFIDENCE INTERVAL
BE Study Statistics
0.80 1.25
point
estimate

1.04
90% CI  1.04 (0.91 – 1.20)

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Solubility, Dissolution and Permeability are the 3 major factors controlling the
oral absorption of drug substances from IR oral medicinal products
BIOPHARMACEUTICS CLASSIFICATION SYSTEM (BCS)
solubility
dissolution
permeability
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 Final guidance in December 2017*
 Three major factors for Immediate Release (IR) dosage forms:
– Dissolution: Very rapid dissolution when 85% or more dissolves within 15 minutes
– Solubility: Highly soluble when highest strength is soluble in 250 mL or less of aqueous
media, pH 1-4 at 37C
– intestinal permeability: High permeability when 85% or more is absorbed compared to IV
(bioavailability)
• Mass balance studies,
• Absolute BA studies,
• Intestinal permeability methods;
• FDA identified markers (0-85%+)
Bioequivalence Review
BCS-Update and Basics: IR products
https://www.fda.gov/downloads/Drugs/GuidanceComplianceRegulatoryInformation/Guidances/UCM070246.pdf
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 Class 1: High solubility—high permeability
– Waived if inactive do not affect
 Class 2: Low solubility-high permeability:
– Not waived
 Class 3: High solubility—Low permeability
– Waived if same inactive chemical and same quantity (within a range)
 Class 4: Low Solubility—Low Permeability
– Not waived
 Narrow therapeutic index or absorbed in oral cavity: Not waived
Bioequivalence Review
BCS Classes: IR products
Amidon et al.: A theoretical basis for a biopharmaceutic drug classification: the
correlation of in vitro drug product dissolution and in vivo bioavailability. Pharm.
Res. 12: 413-420, 1995.
Good Laboratory Practice
CFR 21 Part 58
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GLP is a formal regulation that was created by the FDA (United
states food and drug administration) in 1978.
Although GLP originated in the United States, it had a world wide
impact.
Non-US companies that wanted to do business with the United
states or register their pharmacies in the United States had to
comply with the United States GLP regulations.
They eventually started making GLP regulations in their home
countries.
In 1981 an organization named OECD (organization for economic
co-operation and development ) produced GLP principles that are
international standard.
HISTORY
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WHY WAS GLP CREATED?
In the early 70’s FDA became aware of cases of poor laboratory practice all over
the United States.
FDA decided to do an in-depth investigation on 40 toxicology labs.
They discovered a lot fraudulent activities and a lot of poor lab practices.
Examples of some of these poor lab practices found were
1. Equipment not been calibrated to standard form , therefore giving wrong
measurements.
2. Incorrect/inaccurate accounts of the actual lab study
3. Inadequate test systems
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 Describes good practices for non-clinical lab studies that support research or marketing
approvals for FDA-regulated products
GLP
What It Is
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Appropriately qualified personnel
Adequate resources
Appropriate procedures for:
– Sanitation, health precautions, clothing
– Test protocol development, test methods
– Data analysis, report development
Appropriately qualified study director
Quality assurance function
GLP
General Requirements
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Suitable size, construction, segregation
– Animal care
– Animal supplies
– Test & control products maintained in a secure area
– Operating “suite”
– Specimen & data storage
GLP
Facilities Requirements
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Appropriately designed
Adequate thru-put capacity
Appropriately located
Routinely maintained & calibrated
GLP
Equipment Requirements
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Animal room prep
Animal care
Receipt, ID, storage, handling, mixing & sampling of test & control articles
Test system observations
Lab tests
Handling of moribund or dead animals
Necropsy or postmortem exams of animals
GLP
Standard Operating Procedures
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Collection & ID of specimens
Histopathology
Data handling, storage & retrieval
Equipment maintenance & calibration
Transfer, proper placement & ID of animals
GLP
Standard Operating Procedures
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Adequate labeling
– Identity
– Concentration
– Storage requirements
– Expiration date
GLP
Reagents & Solutions
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Adequate characterization
Proper receipt, storage, distribution
When mixed with a carrier, adequate methods to confirm
– Mixture uniformity
– Article concentration
– Article stability
GLP
Test & Control Articles
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Written, approved protocol indicating test objectives and methods
Study conducted in accordance with protocol
Study monitoring to confirm protocol compliance
Appropriate labeling of specimens by test system, study, nature and
collection date
Records of gross findings from postmortems available to pathologist for
specimen histopathology
GLP
Study Implementation
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Standard data capture/recording requirements
– Legibility
– Permanence
– Accountability
– Changes
GLP
Study Implementation
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Final report of results
Study records & data methodically archived to facilitate expedient retrieval
– Study documents
– Raw data
– Specimens
– Protocols
– QA inspections
– Personnel training & qualifications
– Calibration & maintenance records
GLP
Records & Reports
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Records retention (shortest of):
– ≥ 2 yr after FDA marketing clearance
– ≥ 5 yr after data submitted to FDA in support of marketing application
– ≥ 2 yr after Sponsor decision not to proceed with marketing application
– Wet specimens hold as long as viable
Records transferable with written FDA notification
GLP
Records & Reports
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Grounds for disqualification:
– Failure to comply with regulations
– Noncompliance adversely affects study validity
– Previous regulatory actions have been unsuccessful in modifying facility
operations
GLP
Facility Disqualification
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Basic Requirements: FDA Guidance Finalized May 2018
https://www.fda.gov/downloads/Drugs/Guidance/ucm070107.pdf
Bioanalytical Methods
 Quantitative measurement in a biological matrix (blood, plasma, serum or urine):
Accuracy, Precision, Selectivity, Sensitivity, Reproducibility, Stability
 Written SOP to include record keeping, security and chain of sample custody, sample
preparation, analytical tools, reagents, equipment, instrumentation, QC procedures and
result verification. 21 CRR Part 11 recommended.
 Adhere to FDA's Good Laboratory Practices (GLPs) requirements7 (21 CFR 135 Part
58). The bioanalytical must meet the criteria specified in 21 CFR 320.29.
 Method validation experiments should include a minimum of six runs conducted over
several days, with at least four concentrations (including LLOQ, low, medium, and high)
analyzed in duplicate in each run.
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– During development and implementation of a novel bioanalytical method
– Analysis of a new drug entity
– Revision to an existing method that add metabolite quantification
Bioequivalence Review
Bioanalytical Methods—Full
Full validation
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 Method transfers between laboratories
or analysts
 Change in analytical methodology (e.g.,
change in detection systems)
 Change in anticoagulant in harvesting
biological fluid (e.g., heparin to EDTA)
 Change in matrix within species (e.g.,
human plasma to human urine)
 Change in sample processing
procedures
Partial Validation
Bioanalytical Methods
 Change in species within matrix (e.g., rat
plasma to mouse plasma)
 Change in relevant concentration range
 Changes in instruments and/or software
platforms
 Modifications to accommodate limited
sample volume (e.g., pediatric study)
 Rare matrices
 Selectivity demonstration of an analyte
in the presence of concomitant
medications
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 When two or more bioanalytical methods are used across same or different studies
 When data generated using different analytical techniques: LC-MS/MS vs. ELISA
 Full validation
– During development and implementation of a novel bioanalytical method
– Analysis of a new drug entity
– Revision to an existing method that add metabolite quantification
Bioanalytical Methods
Cross Validation
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 Selectivity is the ability of an analytical method to differentiate and quantify the analyte
in the presence of other components in the sample. Evidence should be provided that
the substance quantified is the intended analyte.
 Analyses of blank samples of the appropriate biological matrix (plasma, urine, or other
matrix) should be obtained from at least six sources. Each blank sample should be
tested for interference, and selectivity should be ensured at the lower limit of
quantification (LLOQ).
 Potential interfering substances in a biological matrix include endogenous matrix
components; metabolites; decomposition products; and, in the actual study,
concomitant medication and other xenobiotics. If the method is intended to quantify
more than one analyte, each analyte should be tested to ensure that there is no
interference.
Bioanalytical Methods
Selectivity
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 Closeness of mean test results obtained by the method to the actual value
(concentration) of the analyte.
 Determined by replicate analysis of samples containing known amounts of the analyte
(i.e., QCs).
 Measured using a minimum of five determinations per concentration.
 A minimum of three concentrations in the range of expected study sample
concentrations is recommended.
 The mean value should be within 15% of the nominal value except at LLOQ, where it
should not deviate by more than 20%. The deviation of the mean from the nominal
value serves as the measure of accuracy.
Bioanalytical Methods
Accuracy
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 Closeness of individual measures of an analyte when the procedure is applied
repeatedly to multiple aliquots of a single homogeneous volume of biological matrix.
 Measured using a minimum of five determinations per concentration.; minimum of three
concentrations in the range of expected study sample concentrations is recommended.
 Precision at each concentration level should not exceed 15% of the coefficient of
variation (CV) except for the LLOQ, where it should not exceed 20% of the CV.
 Within-run precision (intra-batch precision or within-run repeatability) is an assessment
of precision during a single analytical run. Between-run precision (inter-batch precision
or between-run repeatability) is an assessment of precision over time and may involve
different analysts, equipment, reagents, and laboratories.
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Precision
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 Sample concentrations above the upper limit of the standard curve should be diluted.
The accuracy and precision of these diluted samples should be demonstrated in the
method validation.
 The recovery of an analyte in an assay is the detector response obtained from an
amount of the analyte added to and extracted from the biological matrix, compared to
the detector response obtained for the true concentration of the analyte in solvent.
Recovery pertains to the extraction efficiency of an analytical method within the limits of
variability. Recovery of the analyte need not be 100%, but the extent of recovery of an
analyte and of the internal standard should be consistent, precise, and reproducible.
Recovery experiments should be performed by comparing the analytical results for
extracted samples at three concentrations (low, medium, and high) with unextracted
standards that represent 100% recovery.
Bioanalytical Methods
Recovery
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 Relationship between instrument response and known concentrations of the analyte—
should continuous and reproducible.
 A calibration curve should be generated for each analyte in the sample in the same
biological matrix as the samples in the intended study by spiking the matrix with known
concentrations of the analyte.
 The calibration standards can contain more than one analyte; concentrations of
standards should be chosen on the basis of the concentration range expected.
– Matrices may be difficult to obtain (e.g., cerebrospinal fluid)—use surrogate matrices.
– Blank sample (matrix sample processed without analyte or internal standard), a zero sample
(matrix sample processed without analyte but with internal standard), and at least six non-
zero samples (matrix samples processed with analyte and internal standard) covering the
expected range, including LLOQ.
 .
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Calibration
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 Calibration standards and QC samples spiked with reference standard.
 Identity and purity of RS confirmed.
 Should be same as analyte—otherwise an established chemical form (free base, acid
or salt, or ester.
 Certified standards (e.g., USP; commercially supplied; other substances
 Internal standard
 Discard solutions beyond expiry unless purity established
Bioanalytical Methods
Reference Standards
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 LLOQ: response at least 5x the blank; analyte peak identified and secrete and
reproducible, precision not exceeding 20% of CV and accuracy within 20% of nominal
concentration. [LLOQ is NOT limit of detection]
– Established using at least 5 samples and determining the CV and/or appropriate confidence
interval
 ULOQ: analyte peak should be reproducible and back calculated concentration
precision not to exceed 15% of the CV and accuracy within 15% of nominal
concentration
 Standard/calibrator should not deviate more than 20%; standard curve at least 75% of
non-zero standards meet this criteria
 QC samples: at least 3 concentrations in duplicate in each run, one three times the
LLOQ, one mid-range and one high end.
Bioanalytical Methods
Limits
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 QCs provide basis of accepting or rejecting
– At least 67% should be within 15%
– At least 50% of QCs within 15% of their nominal concentration; or use CI approach
– Minimum number of QCs be at least 5% of the number of unknown sample or six total
whichever is greater.
 Calibration standard and QCs prepared from separate stock solutions but can be same
spiking solution, if stability verified.
 A single source of blank matrix provided absence of matrix effect.
 At least one demonstration of precision and accuracy of calibrators and QCs prepared
from separate stock solution is expected.
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Limits
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 Sensitivity, lowest concentration with acceptance accuracy and precision: LLOQ
 Reproducibility: Replicate measurements using the assay, including QCs and possibly
incurred samples; reinjection reproducibility evaluated if instrument interruption.
 Stability: pre-study stability for sample handling times and storage conditions during
study conduct; data specific to matrix and container system—do not extrapolate.
 Analyte stability in stock solution; freeze-thaw stability, bench=top stability, long-term
stability, stock solution stability; stability during processing (e.g., in autosampler)
Bioanalytical Methods
Sensitivity, Reproducibility, Stability
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 System suitability using spiked samples independent of calibrators QCs or study
samples
 Calibration curves and QCs in all analytical runs.
 Response function determined by statistical tests based on actual standard points
 QCs used to accept or reject and also if calibration standards fall outside range
 Repeat analysis SOP most important
 Sample Data Reintegration: SOP established a priori; audits maintained and original
and reintegration data reported.
Bioanalytical Methods
Use, Data Analysis and Reporting
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 Reliability of the reported subject sample analyte concentration; required for BE studies;
for non-clinical conduct ISR once a month for each method and each species.
 Repeat analysis of a subset of subject samples in separate runs on different days—
supporting precision and accuracy with spiked QCs.
 Compared to freshly prepared calibrators; total ISR sample 7% of the study sample
size; samples to include around Cmax and in elimination phase
 67% of repeat results be within 20% for small molecule and 30% for large molecules.
Percentage difference determined by (Repeat-Original)*100/ Mean
Bioanalytical Methods
Incurred Sample Reanalysis
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 Most requirements for chromatography
 Labeled analytes: binding reoptimized, performance verified with standard curves and
QCs
 Antibodies: key cross-reactivities checked; tracer experiment repeated.
 Matrices: tracer experiments repeated
Bioanalytical Methods
Ligand Binding Assays
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 Distinguishing between endogenous and therapeutic
 Biological matrix for calibration standards same as study sample without endogenous
 Alternate matrices not recommended unless analyte-free matrix not available
 QCs prepared by spiking known quantity of analyte in the same biological matrix as
study samples; endogenous concentrate measured prior to QC preparation (e.g., by
replicate analysis).
 Concentration for the QCs account for endogenous in biological matrix and
representative of study concentration.
Bioanalytical Methods
Endogenous Compounds
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 Biomarker assay validation same as for PK assays, some characteristics may not apply
 Kits require site-specific validation; specificity, accuracy, precision, and stability under
actual conditions; modifications from kit instruction validated.
– Where calibration standards sparse, include in-house validation with sufficient number
– Actual QC concentration should be known.
– Standards and QCs prepared in the same matrix; where different matrix used, it is justified
– If reference standard differs from analyte, testing to evaluate difference in immunologic
activity with kit reagents.
– Multiple kits: lot to lot variability, comparability
– Multiple assay plates to have sufficient replicate QCs for each plat Acceptance criteria for
individual plates and overall analytical run
Bioanalytical Methods
Biomarker and Kits
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 Method development and validation data reports
 Bioanalytical reports of the application of any methods to study sample analysis
 Overall summary information including limitation of use
 All documents (paper or electronic) stored contemporaneously and subsequent
changes no obscure original data
 System suitability before analytical run; data on site
– Samples should be different from study samples, standards and QCs to be analyzed and not
used as their own system suitability samples within analytical run
 Report to include purity evidence, procedures, deviations, serial chromatograms from 5-
20% subjects, repeat testing, missing samples, and tables
Bioanalytical Methods
Documentation
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 Method development and validation data reports
 Bioanalytical reports of the application of any methods to study sample analysis
 Overall summary information including limitation of use
 All documents (paper or electronic) stored contemporaneously and subsequent
changes no obscure original data
 System suitability before analytical run; data on site
– Samples should be different from study samples, standards and QCs to be anaytzed and not
used as their own system suitability samples within analytical run
 Report to include purity evidence, procedures, deviations, serial chromatgorams from 5-
20% subjects, repeat testing, missing samples, and tables
Bioanalytical Methods
Documentation