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生物学とプログラミング
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2017/10/29 CAMPHOR-×KMC合同LT会で話しました。
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生物学とプログラミング
1.
生物学とプログラミング Misaki Sakashita 2017/10/29 CAMPHOR-×KMC 合同LT会
2.
自己紹介 なぜ生物学専攻なのにプログラミングをやっているの? 2 • Twitter :
@marty1martie • 大阪大学 (M2) • CAMPHOR- 所属 • C/C++, Processing, Python ... • 生物学を専攻
3.
生物の研究でもプログラミングすることあります • 生物の現象に対して、あるルールを仮定する • ルールにしたがって動くモデルをコンピュータ上で作る
→ 現象を再現 ex. boid Question「生き物の群れはどうやってできるの?」 ルール「近すぎたら離れる、ちょうどいい距離だったら並走、 離れすぎてたら集まる」 3
4.
モデルを動かしてみると... 4 ルール
5.
その他のモデル • DLAモデル 5 ルール 実装
6.
プログラミングをもっとやろう! • 学部~修士でC/C++, Processingを学ぶ •
CAMPHOR-では... - 研究室のHP作成 (HTML/CSS, Bootstrap) http://www.fbs.osaka-u.ac.jp/labs/skondo/ - 翻訳ツール (Python) https://github.com/marty958/instant-translation - コミュニティ内のプロダクトのデザイン担当 ...etc. 6
7.
ご清聴ありがとうございました!
Editor's Notes
生物学専攻がプログラミングを始めるとこうなる 生物の研究でもプログラミングをすることがあります あるルールを設定し、それにしたがって動くモデルを作ります - 理論生物学という ex. boid 生物学的なQuestion「生き物の群れはどうやってできるの?」 ルール「近すぎたら離れる、ちょうどいい距離だったら並ぶ、離れすぎてたら集まる」 するとこうなる→動画 その他のモデル DLAモデル 描画(特に3D)が結構悩みどころ -> OpenGL, OpenFrameworks, Processing, Paraview