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ASTRONOMY Telescope
neighbours angry about
phone restrictions p.423
REPRODUCIBILITY Online tool
finds errors in genetic
sequences in papers p.422
GENETICS Tracking down the
most studied genes of all
time and any time p.427
MEDICINE Tuberculosis
test fails to curb disease
spread as hoped p.424
BY ALEXANDRA WITZE, LARAMIE, WYOMING
S
teveDeschcanseethefutureofexoplanet
research, and it’s not pretty. Imagine, he
says,thatastronomersuseNASA’supcom-
ing James Webb Space Telescope to scour the
atmosphere of an Earth-mass world for signs
of life. Then imagine that they chase hints of
atmospheric oxygen for years — before real-
izing that those were false positives produced
by geological activity instead of living things.
Desch, an astrophysicist at Arizona State
University in Tempe, and other planet hunters
met from 13 to 17 November in Laramie,
Wyoming, to plot better ways to scout for life
beyond Earth. Many are starting to argue that
the standard definition of habitability — hav-
ing liquid water on a planet’s surface — is not
the factor that should guide exoplanet explo-
ration. Instead, the scientists say, the field
should focus on the chances of detecting alien
life, should it exist.“Planets can be habitable
and not have life with any impact,” Desch told
researchers at the meeting.
It turns out that water worlds may be some
of the worst places to look for living things.
Onestudypresentedatthemeetingshowshow
a planet covered in oceans could be starved of
phosphorus, a nutrient without which earthly
life cannot thrive. Other work concludes that a
planetswampedinevendeeperwaterwouldbe
geologically dead, lacking any of the planetary
processes that nurture life on Earth.
“Habitability is not only about finding the
signature of an alien life form taking a deep
breath,” says Elizabeth Tasker, an astronomer
and exoplanet researcher at the Japan Aero-
space Exploration Agency’s Institute for Space
and Aeronautical Sciences in Sagamihara.
ASTRONOMY
Exoplanet hunters rethink
search for alien life
Focus shifts to how chemistry and geology could affect chances of life on other worlds.
M.KORNMESSER/ESO
The exoplanet Ross 128b orbits a cool dwarf star at a distance that could allow the world to have liquid water.
2 3 N O V E M B E R 2 0 1 7 | V O L 5 5 1 | N A T U R E | 4 2 1
NEWSINFOCUS
© 2 0 1 7 M a c m i l l a n P u b l i s h e r s L i m i t e d , p a r t o f S p r i n g e r N a t u r e . A l l r i g h t s r e s e r v e d .
LOOKING FOR LIFE
Astronomers are debating how to definitively
detect life on planets outside the Solar System.
Here’s a look at how nine promising candidates
compare to Earth.
100
200
300
400
500
600
0.6 0.8
Earth
GJ 1132b
TRAPPIST-1b
TRAPPIST-1cTRAPPIST-1d
TRAPPIST-1e
TRAPPIST-1f TRAPPIST-1gTRAPPIST-1h
LHS 1140b
Equilibriumtemperature(K)
1.0 1.2 1.4
Radius (relative to Earth)
BY NICKY PHILLIPS
T
wo scientists have rolled out a program
that spots incorrect gene sequences
reported in experiments — and they
have used it to identify flaws in more than
60 papers, almost all of them studies of cancer.
Jennifer Byrne, a cancer researcher at the
Kids Research Institute of the Children’s
Hospital at Westmead in Sydney, Australia,
and Cyril Labbé, a computer scientist at the
University of Grenoble Alpes in France, made
public an early version of the program, called
Seek & Blastn, in October. Now, they want
other researchers to test the program and help
to improve it. They plan eventually to offer it to
journaleditorsandpublishersasanadditionto
the tools that most already use to check papers,
such as software to detect plagiarism.
Byrne has been working on identifying
errors in human-cancer papers since 2015,
when she noticed problems with five papers
on gene function in cancer cells. The authors
of the papers described performing a common
experiment in which they had inactivated a
gene using a short
targeted nucleotide
sequence, to observe
its effects on tumour
cells.
Byrne was famil-
iar with the gene because she was part of the
team that reported it in 1998. And she realized
that the 2015 papers reported using the wrong
nucleotide sequences for the experiment they
claimed to conduct. Two of these papers have
sincebeenretracted.Anothertwoareexpected
to be retracted on 21 November.
After noticing similar errors in another
25 papers,ByrneandLabbédevelopedtheSeek
& Blastn tool to discover more papers with
incorrectly identified nucleotide fragments.
The software extracts nucleotide sequences
from uploaded papers and cross-checks them
against a public database of nucleotides, called
the Nucleotide Basic Local Alignment Search
Tool (Blastn).
“Seek & Blastn tries to find mismatches
between the claimed status of a sequence —
what the paper says it does — and what the
sequence actually is,” says Byrne. A mismatch
is flagged, for instance, when a sequence
described as targeting a human gene doesn’t
find a match in the Blastn database. Sequences
described as non-targeting that do have a
match in Blastn are also detected.
Sofar,theprogramdetectsonlymisidentified
It’s also about how a planet’s geology and
chemistry interconnect to create a welcoming
or hostile environment, she says.
Astronomers have catalogued thousands
of exoplanets, of which more than a dozen
are potentially habitable. The most recent,
announced on 15 November, is Ross 128b,
which is 3.4 parsecs (11 light years) away from
Earth. It resembles the target that scientists
have spent decades hunting: an Earth-sized
planet orbiting a nearby star, probably at the
right distance to allow liquid water.
Most of these planets have some qualities
that stop them being true Earth twins (see
‘Looking for life’). But Tasker says the usual
metrics that scientists use to rank how habit-
able a world is, such as its location relative to
its star, are misguided (E. Tasker et al. Nature
Astron. 1, 0042; 2017).
To figure out how to parcel out valuable
observing time, some scientists suggest target-
ing planets that are thought to have both ocean
and land. Worlds whose surfaces are covered
by water may not have key nutrients available
in forms that can support life — if that life is
based on the same chemistry as Earth’s.
“We have this stereotype that if we have
oceans,wehavelife,”saysTessaFisher,amicro-
bial ecologist at Arizona State. But that is not
what she and her colleagues found when they
studiedahypothetical“aquaplanet”withasur-
face almost or completely covered by enough
water to fill Earth’s oceans five times.
On Earth, rainwater hitting rocks washes
phosphorus and other nutrients into the
oceans. But without any exposed land, there
is no way for phosphorus to enrich water on
an aqua planet over time, Fisher reported at
theLaramiemeeting.Therewouldbenoocean
organisms, such as plankton, to build up oxy-
gen in the planet’s atmosphere, she says —
makingsuchaworldaterribleplacetofindlife.
The wettest planets would run into another
sortoftrouble,saysCaymanUnterborn,ageol-
ogist at Arizona State who analysed the planet-
wide effects of having as much as 50 Earth
oceans’ worth of water. The sheer weight of all
that liquid would exert so much pressure on
the sea floor that the planet’s interior would
not melt at all, Unterborn found.
Planets need at least some internal melting
to sustain geological activity, such as plate tec-
tonics, and to provide the right chemical envi-
ronment for life. In this case, Unterborn says,
“too much water is too much of a good thing”.
Water-rich worlds are easy to make. Many
planets are likely to have formed far from their
parent star, Tasker says, in chilly temperatures
where they could have coalesced from frag-
ments of rock and lots of ice. If such a planet
later migrated closer to its star, the ice would
melt and cover the surface in vast oceans.
Instead of instinctively studying such water
worlds, Tasker says, astronomers need to think
more deeply about how planets have evolved
through time. “We need to look carefully at
picking the right planet,” she says.
The James Webb Space Telescope is set to
launch in 2019. Once in space, it will spend
much of its time studying potentially Earth-
like worlds. Researchers have already begun to
analysehowoxygenorother‘biosignature’gases
in exoplanet atmospheres might appear to the
telescope’s view (C. V. Morley et al. Preprint at
https://arxiv.org/abs/1708.04239; 2017).
Towards the end of the Laramie meeting,
attendees voted on whether scientists will find
evidenceoflifeonanexoplanetby2040.Forty-
seven said no and twenty-nine said yes. But a
greater share was willing to bet that life would
be found in the 2050s or 2060s.
That’s presumably enough time to work
through the debate over which worlds are the
best to target. ■
REPRODUCIBILITY
Tool spots DNA errors in papers
Online software scrutinizes research papers to identify mistakes in gene sequences.
“Youdoget
concernedabout
howtheresults
wereproduced.”
SOURCE:C.V.MORLEYETAL.PREPRINTAT
HTTPS://ARXIV.ORG/ABS/1708.04239(2017)
4 2 2 | N A T U R E | V O L 5 5 1 | 2 3 N O V E M B E R 2 0 1 7
INFOCUSNEWS
© 2 0 1 7 M a c m i l l a n P u b l i s h e r s L i m i t e d , p a r t o f S p r i n g e r N a t u r e . A l l r i g h t s r e s e r v e d .

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Exoplanet hunters rethink search for alien life

  • 1. ASTRONOMY Telescope neighbours angry about phone restrictions p.423 REPRODUCIBILITY Online tool finds errors in genetic sequences in papers p.422 GENETICS Tracking down the most studied genes of all time and any time p.427 MEDICINE Tuberculosis test fails to curb disease spread as hoped p.424 BY ALEXANDRA WITZE, LARAMIE, WYOMING S teveDeschcanseethefutureofexoplanet research, and it’s not pretty. Imagine, he says,thatastronomersuseNASA’supcom- ing James Webb Space Telescope to scour the atmosphere of an Earth-mass world for signs of life. Then imagine that they chase hints of atmospheric oxygen for years — before real- izing that those were false positives produced by geological activity instead of living things. Desch, an astrophysicist at Arizona State University in Tempe, and other planet hunters met from 13 to 17 November in Laramie, Wyoming, to plot better ways to scout for life beyond Earth. Many are starting to argue that the standard definition of habitability — hav- ing liquid water on a planet’s surface — is not the factor that should guide exoplanet explo- ration. Instead, the scientists say, the field should focus on the chances of detecting alien life, should it exist.“Planets can be habitable and not have life with any impact,” Desch told researchers at the meeting. It turns out that water worlds may be some of the worst places to look for living things. Onestudypresentedatthemeetingshowshow a planet covered in oceans could be starved of phosphorus, a nutrient without which earthly life cannot thrive. Other work concludes that a planetswampedinevendeeperwaterwouldbe geologically dead, lacking any of the planetary processes that nurture life on Earth. “Habitability is not only about finding the signature of an alien life form taking a deep breath,” says Elizabeth Tasker, an astronomer and exoplanet researcher at the Japan Aero- space Exploration Agency’s Institute for Space and Aeronautical Sciences in Sagamihara. ASTRONOMY Exoplanet hunters rethink search for alien life Focus shifts to how chemistry and geology could affect chances of life on other worlds. M.KORNMESSER/ESO The exoplanet Ross 128b orbits a cool dwarf star at a distance that could allow the world to have liquid water. 2 3 N O V E M B E R 2 0 1 7 | V O L 5 5 1 | N A T U R E | 4 2 1 NEWSINFOCUS © 2 0 1 7 M a c m i l l a n P u b l i s h e r s L i m i t e d , p a r t o f S p r i n g e r N a t u r e . A l l r i g h t s r e s e r v e d .
  • 2. LOOKING FOR LIFE Astronomers are debating how to definitively detect life on planets outside the Solar System. Here’s a look at how nine promising candidates compare to Earth. 100 200 300 400 500 600 0.6 0.8 Earth GJ 1132b TRAPPIST-1b TRAPPIST-1cTRAPPIST-1d TRAPPIST-1e TRAPPIST-1f TRAPPIST-1gTRAPPIST-1h LHS 1140b Equilibriumtemperature(K) 1.0 1.2 1.4 Radius (relative to Earth) BY NICKY PHILLIPS T wo scientists have rolled out a program that spots incorrect gene sequences reported in experiments — and they have used it to identify flaws in more than 60 papers, almost all of them studies of cancer. Jennifer Byrne, a cancer researcher at the Kids Research Institute of the Children’s Hospital at Westmead in Sydney, Australia, and Cyril Labbé, a computer scientist at the University of Grenoble Alpes in France, made public an early version of the program, called Seek & Blastn, in October. Now, they want other researchers to test the program and help to improve it. They plan eventually to offer it to journaleditorsandpublishersasanadditionto the tools that most already use to check papers, such as software to detect plagiarism. Byrne has been working on identifying errors in human-cancer papers since 2015, when she noticed problems with five papers on gene function in cancer cells. The authors of the papers described performing a common experiment in which they had inactivated a gene using a short targeted nucleotide sequence, to observe its effects on tumour cells. Byrne was famil- iar with the gene because she was part of the team that reported it in 1998. And she realized that the 2015 papers reported using the wrong nucleotide sequences for the experiment they claimed to conduct. Two of these papers have sincebeenretracted.Anothertwoareexpected to be retracted on 21 November. After noticing similar errors in another 25 papers,ByrneandLabbédevelopedtheSeek & Blastn tool to discover more papers with incorrectly identified nucleotide fragments. The software extracts nucleotide sequences from uploaded papers and cross-checks them against a public database of nucleotides, called the Nucleotide Basic Local Alignment Search Tool (Blastn). “Seek & Blastn tries to find mismatches between the claimed status of a sequence — what the paper says it does — and what the sequence actually is,” says Byrne. A mismatch is flagged, for instance, when a sequence described as targeting a human gene doesn’t find a match in the Blastn database. Sequences described as non-targeting that do have a match in Blastn are also detected. Sofar,theprogramdetectsonlymisidentified It’s also about how a planet’s geology and chemistry interconnect to create a welcoming or hostile environment, she says. Astronomers have catalogued thousands of exoplanets, of which more than a dozen are potentially habitable. The most recent, announced on 15 November, is Ross 128b, which is 3.4 parsecs (11 light years) away from Earth. It resembles the target that scientists have spent decades hunting: an Earth-sized planet orbiting a nearby star, probably at the right distance to allow liquid water. Most of these planets have some qualities that stop them being true Earth twins (see ‘Looking for life’). But Tasker says the usual metrics that scientists use to rank how habit- able a world is, such as its location relative to its star, are misguided (E. Tasker et al. Nature Astron. 1, 0042; 2017). To figure out how to parcel out valuable observing time, some scientists suggest target- ing planets that are thought to have both ocean and land. Worlds whose surfaces are covered by water may not have key nutrients available in forms that can support life — if that life is based on the same chemistry as Earth’s. “We have this stereotype that if we have oceans,wehavelife,”saysTessaFisher,amicro- bial ecologist at Arizona State. But that is not what she and her colleagues found when they studiedahypothetical“aquaplanet”withasur- face almost or completely covered by enough water to fill Earth’s oceans five times. On Earth, rainwater hitting rocks washes phosphorus and other nutrients into the oceans. But without any exposed land, there is no way for phosphorus to enrich water on an aqua planet over time, Fisher reported at theLaramiemeeting.Therewouldbenoocean organisms, such as plankton, to build up oxy- gen in the planet’s atmosphere, she says — makingsuchaworldaterribleplacetofindlife. The wettest planets would run into another sortoftrouble,saysCaymanUnterborn,ageol- ogist at Arizona State who analysed the planet- wide effects of having as much as 50 Earth oceans’ worth of water. The sheer weight of all that liquid would exert so much pressure on the sea floor that the planet’s interior would not melt at all, Unterborn found. Planets need at least some internal melting to sustain geological activity, such as plate tec- tonics, and to provide the right chemical envi- ronment for life. In this case, Unterborn says, “too much water is too much of a good thing”. Water-rich worlds are easy to make. Many planets are likely to have formed far from their parent star, Tasker says, in chilly temperatures where they could have coalesced from frag- ments of rock and lots of ice. If such a planet later migrated closer to its star, the ice would melt and cover the surface in vast oceans. Instead of instinctively studying such water worlds, Tasker says, astronomers need to think more deeply about how planets have evolved through time. “We need to look carefully at picking the right planet,” she says. The James Webb Space Telescope is set to launch in 2019. Once in space, it will spend much of its time studying potentially Earth- like worlds. Researchers have already begun to analysehowoxygenorother‘biosignature’gases in exoplanet atmospheres might appear to the telescope’s view (C. V. Morley et al. Preprint at https://arxiv.org/abs/1708.04239; 2017). Towards the end of the Laramie meeting, attendees voted on whether scientists will find evidenceoflifeonanexoplanetby2040.Forty- seven said no and twenty-nine said yes. But a greater share was willing to bet that life would be found in the 2050s or 2060s. That’s presumably enough time to work through the debate over which worlds are the best to target. ■ REPRODUCIBILITY Tool spots DNA errors in papers Online software scrutinizes research papers to identify mistakes in gene sequences. “Youdoget concernedabout howtheresults wereproduced.” SOURCE:C.V.MORLEYETAL.PREPRINTAT HTTPS://ARXIV.ORG/ABS/1708.04239(2017) 4 2 2 | N A T U R E | V O L 5 5 1 | 2 3 N O V E M B E R 2 0 1 7 INFOCUSNEWS © 2 0 1 7 M a c m i l l a n P u b l i s h e r s L i m i t e d , p a r t o f S p r i n g e r N a t u r e . A l l r i g h t s r e s e r v e d .