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  1. 1. 2006 IF = Impact factors for peer reviewed articles. Total CBD publications = 63 Books = 1 Book chapters = 8 Invited journal papers = 10 Papers submitted to peer review journals = 44 Percentage with an IF of >5 = 37.2% Articles submitted and either published, or accepted for publication, in 2006. Al CI’s, Associate CIs and Centre-funded Postdoctoral fellows/PhD students are highlighted in bold. Ainsworth, C., Jansen, R.P.S., Nixon, B. & Aitken, R.J. (2007) First recorded pregnancy and normal birth after ICSI using electrophoretically isolated spermatozoa. Human Reproduction 22, 197-200. [Impact factor = 3.67] Aitken, R.J. et al (2007) Editors. World Health Organization Laboratory Manual for the Examination of Human Semen and Semen-cervical mucus interaction. Cambridge University Press (in press). Aitken, R.J., Skakkebaek, N. & Roman, S.D. (2006) Editorial. Environmental influences on male fertility. Medical Journal of Australia 185, 414-415. [Impact factor = 2.13] Aitken, R.J. & Baker, M.A. (2006) Oxidative stress, sperm survival and fertility control. Molecular and Cellular Endocrinology 250, 66-69. [Impact factor = 2.62] Aitken, R.J. & Bennetts, L. (2006) Reactive oxygen species, friend or foe? In, The sperm cell production, maturation, fertilization, regeneration, pp. 170-193. C. DeJonge & C.L.R. Barrett, Editors. Cambridge University Press, Cambridge. Aitken, R.J. & Bennetts, L. (2007) Reactive oxygen species and their impact on fertility. In, Diagnosis and treatment of male infertility, pp. 255-268. S.C. Oehninger & T. Kruger, Editor. Francis & Taylor, Parthenon Publishing Group, London. Aitken, R.J. & De Iuliis, G. (2007) Origins and consequences of DNA damage in male germ cells. Reproductive Biomedicine Online (in press). [New Journal: no impact factor available] Aitken, R.J. & De Iuliis, G. (2007) Value of DNA integrity assays for fertility evaluation. Reproduction (in press). [Impact factor = 3.14] Aitken, R.J. & McLaughlin E.A. (2007) Molecular mechanisms of sperm capacitation: progesterone- induced secondary calcium oscillations reflect the attainment of a capacitated state. Reproduction (in press). ). [Impact factor = 3.14] Aitken, R.J. (2006) Sperm function tests and fertility. International Journal of Andrology 29,69-75. [Impact factor = 2.3] Aitken, R.J., Nixon, B., Lin, M., Koppers, A.J., Lee, Y.H. & Baker, M.A. (2007) Proteomic changes in mammalian spermatozoa during epididymal maturation. Reproduction, Fertility and Development (in press). ). [Impact factor = 1.55]
  2. 2. 2 Aitken, R.J., Roman, S.D., Baker, M.A. & De Iuliis, G. (2006) Redox regulation of DNA damage in the male germ line. In: Male Mediated Developmental Toxicity. D. Anderson & M. Brinkworth, Editors. Royal Society of Chemistry (in press). Aitken, R.J., Wingate, J., De Iuliis, G. & McLaughlin, E.A. (2007) Analysis of lipid peroxidation in human spermatozoa using BODIPY C11. Molecular Human Reproduction (E-pub). [Impact factor = 3.19] Aitken, R.J., Wingate, J., De Iuliis, G., Koppers, A.J. & McLaughlin, E.A. (2006) Cis- unsaturated fatty acids stimulate reactive oxygen species generation and lipid peroxidation in human spermatozoa. Journal of Clinical Endocrinology and Metabolism 91, 4154-4163. [Impact factor = 6.02] Baker, M.A. & Aitken, R.J. (2006) Identification of SRC as a key PKA-stimulated tyrosine kinase involved in the capacitation-associated hyperactivation of murine spermatozoa. Journal of Cell Science 119, 3182-3192. [Impact factor = 6.54] Baker, M.A., Reeves, G., Minahan, K., Smith, N.D., Hetherington, L. & Aitken, R.J. (2007) Proteomic analysis of human spermatozoa. Proteomics (in press). [Impact factor = 6.09] Beverdam, A. & Koopman, P.A. (2006). Expression profiling of purified mouse gonadal somatic cells during the critical time window of sex determination reveals novel candidate genes for human sexual dysgenesis syndromes. Human Molecular Genetics 15, 417–431. [Impact factor = 7.76] Bowles, J., Knight, D., Smith, C., Wilhelm, D., Richman, J., Mamiya, S., Yashiro, K., Chawengsaksophak, K., Wilson, M.J., Rossant, J., Hamada, H. & Koopman, P.A. (2006). Retinoid signaling determines germ cell fate in mice. Science 312, 596–600. [Impact factor = 30.92] Clemente, E.J., Furlong, R.A., Loveland, K.L. & Affara, N.A. (2006) Gene expression study in the juvenile mouse testis: identification of stage-specific molecular pathways during spermatogenesis. Mammalian Genome 17, 956-975 [Impact factor = 2.75] Cotton, L., Gibbs, G.M., Sanchez-Partida, L.G., Morrison, J.R., de Kretser, D.M. & O’Bryan, M.K. (2006) FGFR-1 signaling is involved in both spermiogenesis and sperm capacitation. Journal of Cell Science 119, 75-84. [Impact factor = 6.54] Curry, B.J., Holt, J.E., McLaughlin, E.A. & Aitken, R.J. (2006) Characterization of structure and expression of the Dzip1 gene in the rat and mouse. Genomics 87, 275-285. [Impact factor = 3.18] De Iuliis, G., Wingate, J., Koppers, A., McLaughlin, E.A. & Aitken, R.J. (2006) Definitive evidence for the non-mitochondrial production of superoxide anion by human spermatozoa. Journal of Clinical Endocrinology and Metabolism 91, 1968-1975. [Impact factor = 6.02] Fitzsimmons, C., McLaughlin, E.A., Mahony, M.J. & Clulow, J. (2007) Optimization of handling, activation and assessment procedures for bufo marinus sperm. Reproduction Fertility and Development (in press). [Impact factor = 1.51] Gibbs, G.M. & O’Bryan, M.K., (2007) Cysteine rich secretory proteins in reproduction and venom. Biology of Reproduction (in press). [Impact factor = 3.58] Gibbs, G.M., Bianco, D.M., Jamsai, D., Herlihy, A., Aitken, R.J., de Kretser, D.M., & O’Bryan, M.K. (2007) Cysteine-rich secretory protein 2 binds to mitogen-activated protein kinase kinase kinase 11 in mouse sperm. Biology of Reproduction (in press). [Impact factor = 3.58]
  3. 3. 3 Gibbs, G.M., Scanlon, M.J., Swarbrick J., Curtis, S., Dulhunty, A., & O’Bryan, M.K. (2006). The cysteine rich secretory protein domain of Tpx-1 is related to toxins and regulates ryanodine Ca2+ signaling. Journal of Biological Chemistry 281, 4156-4163. [Impact factor = 5.85] Habenicht, U-F., Harper, M., Wang, Yi-Fei., De Kretser, D. & Aitken, R.J. (2006) Public health: contribution of family planning towards public health. Molecular and Cellular Endocrinology 250, 212-213. [Impact factor = 2.79 Hargrave, M., Bowles, J. & Koopman, P.A. (2006). In situ hybridization of whole-mount embryos. In: IA Darby, T Hewitson, eds. In Situ Hybridization Protocols, 3rd ed, pp. 103-114. (Methods in Molecular Biology, Vol. 326). Humana Press, Totowa, NJ. Hime, G.R., Loveland, K.L. & Abud, H.E. (2007) Drosophila spermatogenesis: Insights into testicular cancer. International Journal of Andrology (in press) [Impact factor = 2.30] Hogarth, C., Calanni, S., Jans, D.A., & Loveland, K.L. (2006) Importin α mRNAs have distinct expression profiles during spermatogenesis. Developmental Dynamics 235, 253-262. [Impact factor = 3.33] Holt, J.E., Jackson, A., Roman, S.D., Aitken, R.J., Koopman, P.A. & McLaughlin, E.A. (2006). CXCR4/SDF1 interaction inhibits the primordial to primary follicle transition in the neonatal mouse ovary. Developmental Biology 293, 449–460. [Impact factor = 5.23] Holt, J.E., Roman, S.D., Aitken, R.J. & McLaughlin, E.A. (2006) Identification and characterization of a novel MT-retrotransposon specific to the female germ line. Genomics 87, 490- 499. [Impact factor = 3.18] Hughes, L.M., Griffith, R. & Aitken, R.J. (2007) The search for a topical dual action spermicide/microbicide. Current Medicinal Chemistry (in press). [Impact factor = 4.90] Itman, C.L., Mendis, S., Barakat, B. & Loveland, K.L. (2006) All in the family: Transforming growth factor β action in testis development. Reproduction 32(2), 233-46. [Impact factor = 3.14] Kennedy, C. & O’Bryan, M.K., (2006) ENU mutagenesis and male fertility research. Human Reproduction Update, May-June; 12, 293-301. [Impact factor = 5.45] Kennedy, C.L., O’Connor, A.E., Sanchez-Partida, L.G., Holland, M.K., Goodnow, C.C., de Kretser, D.M. & O’Bryan, M.K. (2006) A repository of ENU mutant mouse lines and their potential for male fertility research. Molecular Human Reproduction 11, 871-880. [Impact factor = 3.19] Kerr, J.B., Loveland, K.L., O’Bryan, M.K. & de Kretser, D.M. (2006) Cytology of the testis and intrinsic control mechanisms. In: Knobil and Neill’s Physiology of Reproduction, Third Edition. pp. 827-947. Neill, J.D., Ed. Elsevier Science, USA.. Knower, K.C., McClive, P.J., Bowles, J., Koopman, P.A, Sinclair, A.H. & Harley, V.R. (2007) Expression profile of sexually dimorphic urogenital ridge genes in human embryonic testicular carcinoma line NT2/D1. Sexual Development (in press) New journal – no impact factor Koopman, P.A. (2006) Daughterless cane toads. In: Science of Cane Toad Invasion and Control. pp.111-116. KL Molloy and WR Henderson (Eds.) Invasive Animals Cooperative Research Centre, Canberra, Koopman, P.A. & Wilhelm, D. (2006) Gonadal sex determination and differentiation. In: Encyclopedia of Life Science, John Wiley and Sons, Chichester, UK, (www.els.com).
  4. 4. 4 Lin, M., Lee, Y.H., Xu, W., Baker, M.A. & Aitken, R.J. (2006) Ontogeny of tyrosine phosphorylation-signaling pathways during spermatogenesis and epididymal maturation in the mouse. Biology of Reproduction 75, 588-597. [Impact factor = 3.58] Loveland, K.L., Hogarth, C., Szczepny, A., Calanni, S., & Jans, D.A. (2006) Expression of nuclear transport importins β1 and β3 is regulated during rodent spermatogenesis. Biology of Reproduction 74, 67-74. Impact factor = 3.58] Maldonado-Saldivia, J., van den Bergen, J., Krouskos, M., Gilchrist, M., Sinclair, A.H., Surani, M.A. & Western, P.S. (2007) Dppa2 and Dppa4 are closely linked SAP motif genes restricted to pluripotent cells and the germ line. Stem Cells 25, 19-28. [Impact factor = 6.09] Matsui, T., Kanai-Azuma, M., Hara, K., Matoba, S., Hiramatsu, R., Kawakami, H., Kurohmaru, M., Koopman, P.A. & Kanai, Y. (2006). Redundant roles of Sox17 and Sox18 in postnatal angiogenesis in mice. Journal of Cell Science 119, 3513-3526. [Impact factor = 6.54] McLaughlin, E.A. & Pacey, A.A. (2007) Cryopreservation & Storage of Sperm. In: Textbook of Assisted Reproductive Technologies, 3rd edition 230-245 Eds. Gardener, D.K., Weissman, A., Howles, C.M., Shoham, Z., & Dunitz, M. London UK (in press). Mitchell, L.A., Nixon, B. & Aitken, R.J. (2007) Analysis of chaperone proteins associated with human spermatozoa during capacitation. Molecular Human Reproduction (in press). [Impact factor = 3.19] Nixon, B., Aitken, R.J. & McLaughlin, E.A. (2007) New insights into the molecular mechanisms of sperm-egg interaction. Cellular and Molecular Life Sciences (in press). [Impact factor = 4.58] Nixon, B., MacIntyre, D.A., Mitchell, L.A., Gibbs, G.M, O’Bryan, M., & Aitken, R.J. (2006). The identification of mouse sperm surface-associated proteins and characterization of their ability to act as decapacitation factors. Biology of Reproduction 74, 275-287. [Impact factor = 3.58] O’Bryan, M.K., & de Kretser, D.M, 2006. Mouse models for genes involved in impaired spermatogenesis. International Journal of Andrology 29, 76-89. [Impact factor = 2.31] Polanco, J.C., & Koopman, P.A. (2007) Sry and the hesitant beginnings of male development. Developmental Biology 302, 13-24. (Journal cover). [Impact factor = 5.23] Prahbu, S.D., Meistrich, M., McLaughlin, E.A., Roman, S.D., Warne, S., Mendis, S., Itman, C. & Loveland, K.L. (2006) c-kit receptor proto-oncogene expression in the developing and irradiated rodent testis. Reproduction 131, 489-499. [Impact factor = 3.14] Sarraj, M.A., McClive, P.J., Szczepny, A., Loveland, K.L. & Sinclair, A.H. (2007) Expression of Wsb2 in the developing and adult mouse gonads. Reproduction (accepted 2 Jan 2007 - in press). [Impact factor = 3.14] Siddall, N.A., McLaughlin, E.A., Marriner, N.L. & Hime, G.R. (2006) The RNA-binding protein Musashi is required intrinsically to maintain stem cell identity. Proceedings of the National Academy of Sciences USA 103, 8402-8407 [Impact factor = 10.23] Smith, C.A., Roeszler, K.N., Hudson, Q.J. & Sinclair, A.H. (2006) Avian sex determination: What, When and Where. Cytogenetic and Genome Research (in press) [Impact factor = 2.08]
  5. 5. 5 Svingen, T., Beverdam, A., Bernard, P., McClive, P., Harley, V.R., Sinclair, A.H. & Koopman, P.A. (2007) Sex specific expression of a novel gene Tmem184a during mouse testis differentiation. Reproduction (in press) [Impact factor = 3.14.] Szczepny, A., Hime, G.R. & Loveland, K.L. (2006) Expression of hedgehog signalling components in adult mouse testis. Developmental Dynamics 235, 3063-3070. [Impact factor = 3.33] Wagstaff, K.M. & Jans, D.A. (2006) Intramolecular masking of nuclear localization signals; analysis of importin binding using a novel alphascreen-based method Analytical Biochemistry 348, 49-56. [Impact factor = 2.67] Wilhelm, D., & Koopman, P.A. (2006). The makings of maleness: Towards an integrated view of male sexual development. Nature Reviews Genetics 7, 620-631. [Impact factor = 19.21] Wilhelm, D., Huang, E., Svingen, T., Stanfield, S., Dinnis, D. & Koopman, P.A. (2006). Comparative proteomic analysis to study molecular events during gonad development in mice. Genesis 44, 168–176. [Impact factor = 2.62] Wilson, M.J., Bowles, J. & Koopman, P.A. (2006). The matricellular protein SPARC is internalized in Sertoli, Leydig, and germ cells during testis differentiation. Molecular Reproduction and Development 73, 531–539. [Impact factor = 2.22] Winnall, W.R., Ali, U., O’Bryan M.K., Hirst, J.J., Muir, J.A. & Hedger, M.P. (2007). Endogenous expression of cyclooxygenase-2 by somatic and spermatogenic cells is responsible for constitutive E2 production in the adult rat testis. Biology of Reproduction. (in press) [Impact factor = 3.58] Young, N., Hahn, C.N., Poh, A., Dong, C., Wilhelm, D., Olsson, J., Muscat, G.E.O., Parsons, P., Gamble, J.R. & Koopman, P.A. (2006). Effect of disrupted SOX18 transcription factor function on tumor growth, vascularization, and endothelial development. Journal of the National Cancer Institute 98, 1060-1067. [Impact factor = 15.17] Additional CI publications not directly associated with the Centre Alvisi, G., Jans, D.A. & Ripalti, A. (2006) HCMV DNA polymerase processivity factor ppUL44 dimerizes in the cytosol before translocation to the nucleus Biochemistry USA 45, 6866-6872. [Impact factor = 3.85] Alvisi, G., Poon, I.K.H. & Jans, D.A. (2006) Tumor specific nuclear targeting: promises for anti- cancer therapy Drug Research Updates 6, 40-50 [Impact factor = 4.4] Alvisi, G., Ripalti, A., Ngankeu, A., Giannandrea, M., Caraffi, S.G., Dias, M.M.& Jans, D.A. (2006) HMCV DNA polymerase catalytic subunit pUL54 possesses independently acting nuclear localization and ppUL44 binding motifs Traffic 7, 1322-1332. [Impact factor = 6.2] Arsov, T., Silva, D., O’Bryan, M.K., Sainsbury-Salis, A., Lee, N.J., Kennedy, C., Manji, S.S.M., Vinuesa, C.G., Goodnow, C.C. & Petrovsky, N. (2006) Fat Aussie – a new mouse model of metabolic syndrome and infertility. Molecular Endocrinology July; 20(7), 1610-1622. [Impact factor = 5.81] de Iongh, R.U., Abud, H.E. & Hime, G.R. (2006) Wnt/Frizzled signaling in eye development and disease. Frontiers in Bioscience 11, 2442-2464. [Impact factor = 2.62]
  6. 6. 6 Elliot, D.A., Kim, W.S., Jans, D.A. & Garner, B. (2007) Apoptosis induces neuronal apolipoprotein- E synthesis and localization in apoptotic bodies. Neuroscience Letters (in press). [Impact factor = 1.89] Forwood, J.K. & Jans, D.A. (2006) Quantitative analysis of DNA-protein interactions using double- labelled native gel electrophoresis and fluorimaging. Electrophoresis 27, 3166-3170. [Impact factor = 3.85] Forwood, J.K., Kaur, G. & Jans, D.A. (2007) Nuclear import properties of the sex determining factor SRY. In Methods in Molecular Biology (Protein Targeting Protocols), 2nd. Edition, pp 83-97. Van der Giezen, M. Editor. Humana Press, Totowa, New Jersey. Gasanov, U., Koina, C., Beagley, K.W., Aitken, R.J. & Hansbro, P.M. (2006) Identification of the Insulin-Like Growth Factor II Receptor as a Novel Receptor for Binding and Invasion by Listeria monocytogenes. Infection and Immunity 74, 566-577. [Impact factor = 3.93] Ghildyal, R., Ho, A. & Jans, D.A. (2006) Central role of the Respiratory Syncytial Virus Matrix protein in infection. FEMS Microbiological Reviews 30, 692-705. [Impact factor = 7.7] Gillard, A., Scarff, K., Loveland, K.L., Ricardo, S., & Bird, P. (2006) Modulation and redistribution of Proteinase Inhibitor 8 (Serpin b8) during kidney regeneration. American Journal of Nephrology 26, 34-42. [Impact factor = 2.46] Goffin, L., Vodala, S., Fraser, C., Ryan, J., Timms, M., Meusburger, S., Catimel, B., Nice, E.C., Silver, P.A., Xiao, C-Y., Jans D.A. & Gething, M-J.H. (2006) The unfolded protein response transducer Ire1p contains a nuclear localisation sequence recognised by multiple beta importins. Molecular Biology of the Cell 17, 5309-5323. [Impact factor = 6.52] Hearps, A.C. & Jans, D.A. (2006) HIV-1 Integrase is capable of targeting DNA to the nucleus via an importin alpha/beta-dependent mechanism; dependent mechanism. Biochemistry Journal 398, 475- 484. [Impact factor = 4.22] Hearps, A. & Jans, D.A. (2007) Regulating the functions of the HIV-1 matrix protein. AIDS Research and Human Retroviruses 22 (in press). [Impact factor = 2.53] Huebner, S., Eam, J.E., Huebner, A. & Jans, D.A. (2006) Laminopathy-inducing lamin A mutants can induce redistribution of lamin binding proteins into nuclear aggregates. Experimental Cell Research 312, 171-183. [Impact factor = 4.15] Huebner, S., Eam, J.E., Wagstaff, K.M. & Jans, D.A. (2006) Quantitative analysis of localisation and nuclear aggregate formation induced by GFP-lamin A mutant proteins in living HeLa cells. Journal Cell Biochemistry 98, 810-826. [Impact factor = 3.59] Hutt, K.J., McLaughlin, E.A. & Holland, M.K. (2006) Kit Ligand and c-Kit have diverse roles during mammalian oogenesis and folliculogenesis. Molecular Human Reproduction 12(2), 61-69. [Impact factor = 3.19] Hutt, K.J., McLaughlin, E.A. & Holland, M.K. (2006) Primordial Follicle Activation and Follicular Development in the Juvenile Rabbit Ovary. Cell and Tissue Research 326, 809-822. [Impact factor = 2.38] Hutt, K.J., McLaughlin, E.A. & Holland, M.K. (2006) KIT/KIT Ligand in Mammalian Oogenesis and Folliculogenesis: Roles in Rabbit and Murine Ovarian Follicle Activation and Oocyte Growth. Biology of Reproduction 75(3), 421-33. [Impact factor = 3.58]
  7. 7. 7 Janssen, K., Hoffman, T.G, Jans, D.A., Hay, R.T., Schulze-Osthoff, K. & Fischer, U. (2006) Apoptin is modified by SUMO conjugation and targeted to promyelocytic leukemia protein nuclear bodies. Oncogene, (in press). [Impact factor = 6.9] Okuma, Y., O’Connor, A.E., Hyashi, T., Loveland, K.L., de Kretser, D.M., & Hedger, M.P. (2006). Production and regulation of activin A and inhibin B throughout the cycle of the seminiferous epithelium in the rat. Journal of Endocrinology 190, 331-340. [Impact factor = 3.06] Pryor, M.J., Rawlinson, S.M., Wright, P.J. & Jans, D.A. (2006) CRM1 dependent nuclear export of dengue virus type-2 NS5. In New Treatment Strategies for Dengue and other Flaviviral Diseases, pp. 149-160. Bock, G., & Goode J, Editors. John Wiley and Son Ltd., Chichester, UK. Rawlinson, C.M., Pryor, M.J., Wright, P.J. & Jans, D.A. (2006) Dengue virus RNA polymerase NS5 as a therapeutic target. Current Drug Targets 7, 1623-1638 [Impact factor = 4.1] Roth, D.M., Moseley, G.W., Glover, D., Pouton, C.W. & Jans, D.A. (2007) A microtubule-facilitated nuclear import pathway for cancer regulatory proteins. Traffic, (in press). [Impact factor = 6.4] Ruddock-D’Cruz, N.T., Prashadkumar, S., Wilson, K.J., Heffernan, C., Cooney, M.A., French, A.J., Jans, D.A., Verma, P.J. & Holland, M.K. (2007) Dynamic changes in localization of chromobox (CBX) family members during the maternal to embryonic transition. Molecular Reproduction and Development (in press). [Impact factor = 2.22] Shehu-Xhilaga, M., Kent, S., Batten, J., Ellis, S., van der Meulen, J., O’Bryan, M.K., Cameron, P., Lewin, S. & Hedger, M. (2007) The testis and epididymis are productively infected by SIV and SHIV in juvenile Macaques during the post-acute stage of infection. Retrovirology 4 [Epub ahead of print] [Impact factor = 2.98; unofficial as a new journal] Sinclair, A.H. & Schofield, P.R. (2007) Human embryonic stem cell research: an Australian perspective. Cell 128, 221-223. [Impact factor = 29.43] Smith, C.A., Roezler, K.N. & Sinclair, A.H. (2006) Avian Sex determination. Cytogenetics and Genome Research. (in press) [Impact factor = 2.08] Wagstaff, K.M., Glover, D.J., Tremethick, D.J. & Jans, D.A. (2007) Histone mediated transduction as an efficient means for gene delivery. Molecular Therapy, (in press). [Impact factor = 5.44] Wagstaff, K.M., & Jans, D.A. (2006) Protein transduction: cell penetrating peptides and their therapeutic applications. Current Medicinal Chemistry 13, 1371-1387. [Impact factor = 4.90]