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Version Control with GitHub for Bioinformatics

Rayna Harris
Rayna Harris
Rayna HarrisScientist, Educator, Community-builder

Course presentation that complements teaching via live coding. Inspired by the Software Carpentry Git Novice Lesson. Available online: http://swcarpentry.github.io/git-novice/. Citation: Ahmadia, A., Allen, J., Bachant, P., Banaszkiewicz, P., Barmby, P., Bekolay, T., … Wilson, G. (2015, May). Software Carpentry: Version Control with Git. Zenodo. http://doi.org/10.5281/zenodo.23544. Created for the Fall 2017 Center for Computational Biology and Bioinforamtics Short Course on Version Control for Bioinformatics with GitHub. http://ccbb.utexas.edu/ Slides available at: https://www.slideshare.net/raynamharris/version-control-with-github-for-bioinformatics

Version Control with GitHub for Bioinformatics

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Version Control with
GitHub for Bioinformatics
Rayna Harris
May 17, 2017
https://xkcd.com/1597/
Introductions
• Name and lab
• One sentence about your research
• Level of experience with version
• Favorite breakfast food
Blischak et al. 2016. A Quick Introduction to Version
Control with Git and GitHub. PLOS Comp Biol
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4893424177155
http://b-maze.deviantart.com/art/Werewolf-vs-Dracula-124893530
• cd Desktop
• mkdir Dracula-Planets
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Version Control with GitHub for Bioinformatics