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# Isomers lesson

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### Isomers lesson

2. 2. Isomers Compounds that have the same molecular formula but difference structure and different properties 3 types:  Structural isomers  Geometric isomers  Enantiomers
3. 3. Structural Isomer same KIND and AMOUNT of atoms (molecular formula) but the atoms have different connectivity Structural isomers usually have different physical and chemical properties
4. 4. Structural Isomer
5. 5. Structural Isomer
6. 6. Structural Isomer
7. 7. Structural Isomer
8. 8. Structural Isomer How many different structures can you make from C5H12?
9. 9. Geometric Isomers SAME molecular formula and the SAME connectivity but different spatial arrangements Due to inflexibility of a bond, usually either:  double bonds (cis and trans formation)  bonds that can’t rotate (i.e. in a ring formation)
10. 10. Geometric Isomers
11. 11. Geometric Isomer Why is example 1 not a pair of geometric isomers? Hint: Look at example 2 & 3 and compare to example 1. What is the minimum requirement for a pair of molecules to be considered geometric isomers?
12. 12. Geometric Isomer Answer: Each carbon of the double bond must have two different substituent groups So if example 1 is not a pair of geometric isomers, what are they classified as?
13. 13. Geometric Isomer Another type of geometric isomer is found in ring structures and doesn’t involve double bonds Due to the inflexible nature of the bonds that make up the ring Note: The ring lies on a flat plane (e.g. your paper) and the OH groups are perpendicular to the plane (e.g. up and down)
14. 14. Enantiomer Molecules that are mirror images of each other Note: left and right hands are a pair of enantiomers (mirror images not identical) What other body parts that are enantiomers?
15. 15. EnantiomerActivity: Build these molecule pairs Compare them to determine whether they are enantiomers
16. 16. Enantiomer
17. 17. Enantiomer How are the lower pairs of molecules different from the upper pairs? What condition do you think is necessary for a pair of molecules to be enantiomers? X
18. 18. Enantiomer Requirement: Enantiomers can only occur when each of the four groups attached to the central carbon atom are all different. The central carbon is known as a chiral carbon and the molecule is chiral.
19. 19. Chiral Molecules Asymmetric carbon: carbon with 4 different groups bonded to it No plane of symmetry Mirror image is non-superimposable
20. 20. Achiral Molecule lacks chiral properties has a plane of symmetry
21. 21. Practice:Identify the chiral carbonsDouble bond tocarbon = achiral
22. 22. Application: Amino acids Amino acids are building blocks of proteins Some amino acids can exist as enantiomers because of their chiralty Switching an enantiomer in a biological system can have detrimental effects
23. 23. Application: Enzymes Enzymes are always chiral. Their binding sites are in a specific orientation that fits only one form of an enantiomer. Binding sites won’t fit if the wrong enantiomer is present.
24. 24. Racemic mixture A mixture that contains equal quantities of both enantiomers Enantiomers can interconvert in vivo
25. 25. Racemic mixtureStory of thalidomide (1960’s) A racemic drug given to pregnant women to combat morning sickness One of the enantiomers caused birth defects (teratogen) and death http://www.thalidomide.ca/the-canadian-tragedy/
26. 26. Racemic mixtureWhat’s in Advil (ibuprofen)? Production results in a racemic mixture One of the enantiomers is effective as an anti-inflammatory Takes about 30 minutes for the inactive enantiomer to be converted http://www.brookscole.com/chemistry_d/templates/student_resources/0534389996_mcmurry/CHEM_A_WORK/chapter9.htm The World of Chemistry, 4 ed. 2007. Thomson Brooks/Cole. Joesten, Castellion, & Hogg.
27. 27. Steps to identifying isomers Do the molecules have the same chemical formula?  If the formula is different, they are NOT isomers but completely different molecules Are the molecules identical?  If they are, they are NOT isomers. Are all the atoms connected in the same way to other atoms?  If not, they are STRUCTURAL isomers Look for an inflexible bond (double bond or ring) for geometric isomers Look for mirror images for enantiomers http://2.bp.blogspot.com/_K91FA3B4cpM/SJ_NUmBWWGI/AAAAAAAAACY/UzL8H8Q4oag/s400/ist2_1744503_frustration.jpg
28. 28. Summary Isomer Same Different RequirementsStructuralGeometricEnantiomer
29. 29. Summary Isomer Same Different Requirements MolecularStructural Connectivity formulaGeometricEnantiomer
30. 30. Summary Isomer Same Different Requirements MolecularStructural Connectivity formula Molecular Double bond SpatialGeometric formula & Different substituent arrangement connectivity groups on each carbonEnantiomer
31. 31. Summary Isomer Same Different Requirements MolecularStructural Connectivity formula Molecular Double bond SpatialGeometric formula & Different substituent arrangement connectivity groups on each carbon Molecular Spatial Chiral moleculesEnantiomer formula & arrangement Mirror image connectivity
32. 32. Practice:Identify the chiral carbon
33. 33. Practice:Identify the chiral carbon * * * * * *
34. 34. Practice:Identify the chiral carbons structural isomers structural isomers geometric isomers
35. 35. Practice:Identify the chiral carbons structural isomers * * ** * * * * * * structural isomers geometric isomers * * * *